{"id":"https://openalex.org/W2498761000","doi":"https://doi.org/10.1371/journal.pcbi.1005024","title":"Inference of Gene Regulatory Network Based on Local Bayesian Networks","display_name":"Inference of Gene Regulatory Network Based on Local Bayesian Networks","publication_year":2016,"publication_date":"2016-08-01","ids":{"openalex":"https://openalex.org/W2498761000","doi":"https://doi.org/10.1371/journal.pcbi.1005024","mag":"2498761000","pmid":"https://pubmed.ncbi.nlm.nih.gov/27479082"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1005024","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1005024","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1005024&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1005024&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100394589","display_name":"Fei Liu","orcid":"https://orcid.org/0000-0001-9415-0496"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]},{"id":"https://openalex.org/I2799293361","display_name":"Baoji University of Arts and Sciences","ror":"https://ror.org/05nx0xs09","country_code":"CN","type":"education","lineage":["https://openalex.org/I2799293361"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fei Liu","raw_affiliation_strings":["Institute of Physics and Optoelectronics Technology, Baoji University of Arts and Science, Baoji, China","Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China"],"affiliations":[{"raw_affiliation_string":"Institute of Physics and Optoelectronics Technology, Baoji University of Arts and Science, Baoji, China","institution_ids":["https://openalex.org/I2799293361"]},{"raw_affiliation_string":"Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061712236","display_name":"Shao\u2010Wu Zhang","orcid":"https://orcid.org/0000-0003-1305-7447"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Shao-Wu Zhang","raw_affiliation_strings":["Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038446460","display_name":"Wei-Feng Guo","orcid":"https://orcid.org/0000-0003-0565-177X"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei-Feng Guo","raw_affiliation_strings":["Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071217704","display_name":"Ze\u2010Gang Wei","orcid":null},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ze-Gang Wei","raw_affiliation_strings":["Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012283696","display_name":"Luonan Chen","orcid":"https://orcid.org/0000-0002-3960-0068"},"institutions":[{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210121447","display_name":"Center for Excellence in Molecular Cell Science","ror":"https://ror.org/02rrdvm96","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210121447"]},{"id":"https://openalex.org/I30809798","display_name":"ShanghaiTech University","ror":"https://ror.org/030bhh786","country_code":"CN","type":"education","lineage":["https://openalex.org/I30809798"]},{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Luonan Chen","raw_affiliation_strings":["Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China","Key Laboratory of Systems Biology, Innovation Center for Cell Signaling Network, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China","School of Life Science and Technology, ShanghaiTech University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, China","institution_ids":["https://openalex.org/I17145004"]},{"raw_affiliation_string":"Key Laboratory of Systems Biology, Innovation Center for Cell Signaling Network, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China","institution_ids":["https://openalex.org/I4210121447","https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"raw_affiliation_string":"School of Life Science and Technology, ShanghaiTech University, Shanghai, China","institution_ids":["https://openalex.org/I30809798"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5012283696","https://openalex.org/A5061712236"],"corresponding_institution_ids":["https://openalex.org/I17145004","https://openalex.org/I19820366","https://openalex.org/I30809798","https://openalex.org/I4210106477","https://openalex.org/I4210121447"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":10.443,"has_fulltext":true,"cited_by_count":191,"citation_normalized_percentile":{"value":0.98649533,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"12","issue":"8","first_page":"e1005024","last_page":"e1005024"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.7328826189041138},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6690033674240112},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6390137076377869},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.59852534532547},{"id":"https://openalex.org/keywords/bayesian-network","display_name":"Bayesian network","score":0.5732547640800476},{"id":"https://openalex.org/keywords/dynamic-bayesian-network","display_name":"Dynamic Bayesian network","score":0.4743860065937042},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.47200748324394226},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.45955953001976013},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4088268280029297},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1440030038356781},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.14334431290626526}],"concepts":[{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.7328826189041138},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6690033674240112},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6390137076377869},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.59852534532547},{"id":"https://openalex.org/C33724603","wikidata":"https://www.wikidata.org/wiki/Q812540","display_name":"Bayesian network","level":2,"score":0.5732547640800476},{"id":"https://openalex.org/C82142266","wikidata":"https://www.wikidata.org/wiki/Q3456604","display_name":"Dynamic Bayesian network","level":3,"score":0.4743860065937042},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.47200748324394226},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.45955953001976013},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4088268280029297},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1440030038356781},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.14334431290626526},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1005024","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1005024","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1005024&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:27479082","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27479082","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1005024","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005024","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:f7c4c9a694f9446da57c91d261ae3e45","is_oa":true,"landing_page_url":"https://doaj.org/article/f7c4c9a694f9446da57c91d261ae3e45","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 12, Iss 8, p e1005024 (2016)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:3948309","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4968793","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1005024","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1005024","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1005024&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.46000000834465027}],"awards":[{"id":"https://openalex.org/G1069223013","display_name":null,"funder_award_id":"JSPS KAKENHI","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1231421488","display_name":null,"funder_award_id":"under","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1326857889","display_name":null,"funder_award_id":"B13040","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1360990533","display_name":"\u6838\u53cd\u5fdc\u53ca\u3073\u6838\u5206\u5149\u5b66\u306b\u3088\u308b\u9077\u79fb\u6838\u306e\u69cb\u9020\u306e\u7814\u7a76-1977\u5e74\u539f\u5b50\u6838\u7269\u7406\u5b66\u56fd\u969b\u4f1a\u8b70\u306b\u5411\u3051\u3066-","funder_award_id":"134013","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G1575868368","display_name":null,"funder_award_id":"Chinese Academy of Sciences","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G1848918685","display_name":"\u30c0\u30ea\u30a2\u584a\u6839\u306e\u5f62\u6210\u80a5\u5927\u3068\u4f11\u7720\u306b\u95a2\u3059\u308b\u57fa\u790e\u7684\u7814\u7a76","funder_award_id":"61170","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G236533364","display_name":null,"funder_award_id":"91439103","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2904170494","display_name":null,"funder_award_id":"61134013","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2936351012","display_name":"\u30d3\u30bf\u30df\u30f3B_1\u304a\u3088\u3073CoerzymeA\u306e\u751f\u5408\u751f\u8abf\u7bc0","funder_award_id":"91529","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3459562248","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G3493497629","display_name":null,"funder_award_id":"XDB13040700","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3926467984","display_name":null,"funder_award_id":"XDB13040700","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"},{"id":"https://openalex.org/G4012707942","display_name":null,"funder_award_id":"81471047","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4038925081","display_name":null,"funder_award_id":"KAKENHI Grant Number 15H05707","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G4223744121","display_name":"\u672c\u90a6\u90fd\u5e02\u306b\u304a\u3051\u308b\u652f\u5e97\u7b49\u4e8b\u696d\u6240\u306e\u96c6\u7a4d\u306b\u3064\u3044\u3066","funder_award_id":"17013","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G4227499671","display_name":null,"funder_award_id":"KAKENHI Grant","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G4636223006","display_name":null,"funder_award_id":"JSPS KAK","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G4657425800","display_name":null,"funder_award_id":"15H05","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G481884809","display_name":null,"funder_award_id":"15H057","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G4863695179","display_name":null,"funder_award_id":"91430111, 61473232, 61170134,91439103, 61134013, 91529303 and 81471047","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4987473529","display_name":null,"funder_award_id":"15H05707","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G51480227","display_name":"\u540c\u4f4d\u4f53\u5206\u6790\u306b\u3088\u308b\u53e4\u6587\u5316\u8ca1\u306e\u7814\u7a76","funder_award_id":"143011","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G553493998","display_name":"\u6d5c\u677e\u6c34\u91ce\u85e9\u306b\u304a\u3051\u308b\u7aae\u6c11\u5fa1\u6551\u91d1\u3068\u56f2\u7a40\u5236\u5ea6\u306e\u7814\u7a76\u2015\u6c34\u91ce\u5fe0\u90a6\u306e\u85e9\u653f\u306e\u4e00\u74b0\u3068\u3057\u3066\u2015","funder_award_id":"13040","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G5648323446","display_name":"\u6025\u5897\u3059\u308b\u6bcd\u89aa\u306e\u5c31\u52b4\u306b\u4f34\u3046\u5bb6\u5ead\u751f\u6d3b\u306e\u5909\u52d5\u3068\u5bb6\u5ead\u30fb\u5730\u57df\u793e\u4f1a\u306e\u6b21\u4e16\u4ee3\u80b2\u6210\u529b\u306e\u6d3b\u6027\u5316\u306b\u95a2\u3059\u308b\u7dcf\u5408\u7684\u8abf\u67fb\u7814\u7a76","funder_award_id":"61134013","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G5786340949","display_name":null,"funder_award_id":"KAKENHI Grant Number","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G5862120891","display_name":null,"funder_award_id":"1134013","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5976796221","display_name":null,"funder_award_id":"15H0570","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994494637","display_name":null,"funder_award_id":"and 81","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6049864089","display_name":"\u8a00\u8a9e\u5b66\u7fd2\u306b\u304a\u3051\u308b\u624b\u304c\u304b\u308a\u5229\u7528\u306e\u7814\u7a76","funder_award_id":"11340","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G6258415954","display_name":null,"funder_award_id":"Chinese","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6490214011","display_name":null,"funder_award_id":"91529303","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G649448286","display_name":null,"funder_award_id":"61170134","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7616779107","display_name":"\u5404\u7a2e\u5ca9\u77f3\u306b\u7531\u6765\u3059\u308b\u571f\u58cc\u306e\u7121\u5b9a\u5f62\u7121\u6a5f\u6210\u5206\u306e\u7814\u7a76","funder_award_id":"147104","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G7653732590","display_name":null,"funder_award_id":"61473232","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7880618398","display_name":null,"funder_award_id":"91529303","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"},{"id":"https://openalex.org/G8320208431","display_name":null,"funder_award_id":"91430111","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8430481527","display_name":null,"funder_award_id":"Number","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G8449644732","display_name":"\u6838\u9178\u4ee3\u8b1d\u62ee\u6297\u7269\u8cea\u3092\u4e3b\u4f53\u3068\u3059\u308b\u7570\u9805\u74b0\u72b6\u5316\u5408\u7269\u306b\u95a2\u3059\u308b\u7814\u7a76","funder_award_id":"91430","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G8467994015","display_name":"\u30c9\u30a4\u30c4\u306b\u304a\u3051\u308b\u6559\u80b2\u300c\u5b66\u300d\u6210\u7acb\u524d\u53f2\u306e\u7814\u7a76\u2015\u5553\u8499\u6559\u80b2\u601d\u60f3\u306e\u53f2\u7684\u69cb\u9020\u306e\u89e3\u660e\u3092\u901a\u3057\u3066\u307f\u305f\u2015","funder_award_id":"11701","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G8674452391","display_name":"\u5408\u6210\u74b0\u72b6\u30da\u30d7\u30c1\u30c9\u3092\u30e2\u30c7\u30eb\u3068\u3057\u305f\u6297\u751f\u7269\u8cea\u306e\u69cb\u9020\u3068\u6a5f\u80fd\u306b\u95a2\u3059\u308b\u7814\u7a76","funder_award_id":"91439","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G8779150906","display_name":null,"funder_award_id":"91439103","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321133","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2498761000.pdf","grobid_xml":"https://content.openalex.org/works/W2498761000.grobid-xml"},"referenced_works_count":78,"referenced_works":["https://openalex.org/W1481919380","https://openalex.org/W1530398305","https://openalex.org/W1592914872","https://openalex.org/W1891536063","https://openalex.org/W1892363833","https://openalex.org/W1963906834","https://openalex.org/W1965032353","https://openalex.org/W1971623350","https://openalex.org/W1978899062","https://openalex.org/W1990512452","https://openalex.org/W1994909272","https://openalex.org/W1996264210","https://openalex.org/W1997207317","https://openalex.org/W1997432697","https://openalex.org/W2000264668","https://openalex.org/W2008358153","https://openalex.org/W2011109338","https://openalex.org/W2015208937","https://openalex.org/W2028748300","https://openalex.org/W2035471593","https://openalex.org/W2044525257","https://openalex.org/W2045283959","https://openalex.org/W2054331129","https://openalex.org/W2057306408","https://openalex.org/W2069986908","https://openalex.org/W2073609776","https://openalex.org/W2076513103","https://openalex.org/W2079829409","https://openalex.org/W2081468394","https://openalex.org/W2087425218","https://openalex.org/W2095622082","https://openalex.org/W2098086436","https://openalex.org/W2099768941","https://openalex.org/W2101029276","https://openalex.org/W2105129830","https://openalex.org/W2106927126","https://openalex.org/W2106945333","https://openalex.org/W2109384743","https://openalex.org/W2110699703","https://openalex.org/W2111384508","https://openalex.org/W2115428292","https://openalex.org/W2122708083","https://openalex.org/W2122718339","https://openalex.org/W2124199927","https://openalex.org/W2126010462","https://openalex.org/W2129564794","https://openalex.org/W2129737673","https://openalex.org/W2129794000","https://openalex.org/W2132866491","https://openalex.org/W2136988691","https://openalex.org/W2139997707","https://openalex.org/W2143044785","https://openalex.org/W2146264532","https://openalex.org/W2148944713","https://openalex.org/W2150926065","https://openalex.org/W2151098810","https://openalex.org/W2153011302","https://openalex.org/W2154835728","https://openalex.org/W2155573334","https://openalex.org/W2157581457","https://openalex.org/W2157611962","https://openalex.org/W2157984621","https://openalex.org/W2160095931","https://openalex.org/W2160533336","https://openalex.org/W2161205483","https://openalex.org/W2161409973","https://openalex.org/W2161467890","https://openalex.org/W2161642932","https://openalex.org/W2161922735","https://openalex.org/W2163296115","https://openalex.org/W2167190345","https://openalex.org/W2190006324","https://openalex.org/W2194985241","https://openalex.org/W2337819340","https://openalex.org/W2417365772","https://openalex.org/W2611370172","https://openalex.org/W3099289621","https://openalex.org/W4250095245"],"related_works":["https://openalex.org/W2544242547","https://openalex.org/W2119218276","https://openalex.org/W2369018153","https://openalex.org/W2530648058","https://openalex.org/W2950199998","https://openalex.org/W2560421304","https://openalex.org/W2386937658","https://openalex.org/W2124007391","https://openalex.org/W2578973671","https://openalex.org/W2951387065"],"abstract_inverted_index":{"The":[0,209],"inference":[1],"of":[2,43,73,140,154,162,296,303,311],"gene":[3,104,164],"regulatory":[4,74,168],"networks":[5,58,142,288],"(GRNs)":[6],"from":[7,47,79,103,177,247],"expression":[8,105],"data":[9,106],"can":[10,214],"mine":[11],"the":[12,39,71,85,109,159,173,200,205,225,229,232,243,253,282,293,309,312],"direct":[13],"regulations":[14,198,236],"among":[15],"genes":[16],"and":[17,76,113,202,221,271,277],"gain":[18],"deep":[19],"insights":[20],"into":[21,137],"biological":[22],"processes":[23],"at":[24],"a":[25,92,138,152,187],"network":[26,52,98,110,131,189,211,257],"level.":[27],"During":[28],"past":[29],"decades,":[30],"numerous":[31],"computational":[32,63,294],"approaches":[33],"have":[34],"been":[35],"introduced":[36],"for":[37],"inferring":[38],"GRNs.":[40,144],"However,":[41],"many":[42],"them":[44],"still":[45],"suffer":[46,78],"various":[48],"problems,":[49],"e.g.,":[50],"Bayesian":[51,97,287],"(BN)":[53],"methods":[54,68,268],"cannot":[55,69],"handle":[56],"large-scale":[57],"due":[59,298],"to":[60,100,127,150,299],"their":[61],"high":[62],"complexity,":[64],"while":[65],"information":[66,125],"theory-based":[67],"identify":[70,308],"directions":[72,310],"interactions":[75],"also":[77,307],"false":[80,206,233],"positive/negative":[81],"problems.":[82],"To":[83],"overcome":[84],"limitations,":[86],"in":[87,199,258],"this":[88],"work":[89],"we":[90],"present":[91],"novel":[93],"algorithm,":[94],"namely":[95],"local":[96,141,155,184,222,286,304],"(LBN),":[99],"infer":[101],"GRNs":[102],"by":[107,157,192,217],"using":[108],"decomposition":[111,283],"strategy":[112,284],"false-positive":[114],"edge":[115],"elimination":[116],"scheme.":[117],"Specifically,":[118],"LBN":[119,264],"algorithm":[120],"first":[121],"uses":[122],"conditional":[123],"mutual":[124],"(CMI)":[126],"construct":[128],"an":[129],"initial":[130],"or":[132,143,190,212,234],"GRN,":[133],"which":[134,170,195],"is":[135,148],"decomposed":[136],"number":[139],"Then,":[145],"BN":[146,223,297],"method":[147],"employed":[149],"generate":[151],"series":[153],"BNs":[156,185],"selecting":[158],"k-nearest":[160],"neighbors":[161],"each":[163],"as":[165,250,252],"its":[166],"candidate":[167],"genes,":[169],"significantly":[171],"reduces":[172,196],"exponential":[174],"search":[175],"space":[176],"all":[178],"possible":[179],"GRN":[180,191,201,213,245],"structures.":[181],"Integrating":[182],"these":[183],"forms":[186],"tentative":[188,226],"performing":[193,219],"CMI,":[194],"redundant":[197,235],"thus":[203],"alleviates":[204],"positive":[207],"problem.":[208],"final":[210],"be":[215],"obtained":[216],"iteratively":[218],"CMI":[220],"on":[224,242],"network.":[227],"In":[228,280],"iterative":[230],"process,":[231],"are":[237],"gradually":[238],"removed.":[239],"When":[240],"tested":[241],"benchmark":[244],"datasets":[246],"DREAM":[248],"challenge":[249],"well":[251],"SOS":[254],"DNA":[255],"repair":[256],"E.coli,":[259],"our":[260],"results":[261],"suggest":[262],"that":[263],"outperforms":[265],"other":[266],"state-of-the-art":[267],"(ARACNE,":[269],"GENIE3":[270],"NARROMI)":[272],"significantly,":[273],"with":[274,285],"more":[275],"accurate":[276],"robust":[278],"performance.":[279],"particular,":[281],"not":[289],"only":[290],"effectively":[291],"reduce":[292],"cost":[295],"much":[300],"smaller":[301],"sizes":[302],"GRNs,":[305],"but":[306],"regulations.":[313]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":16},{"year":2024,"cited_by_count":15},{"year":2023,"cited_by_count":18},{"year":2022,"cited_by_count":27},{"year":2021,"cited_by_count":23},{"year":2020,"cited_by_count":29},{"year":2019,"cited_by_count":21},{"year":2018,"cited_by_count":29},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
