{"id":"https://openalex.org/W2396056682","doi":"https://doi.org/10.1371/journal.pcbi.1004941","title":"Reactome from a WikiPathways Perspective","display_name":"Reactome from a WikiPathways Perspective","publication_year":2016,"publication_date":"2016-05-20","ids":{"openalex":"https://openalex.org/W2396056682","doi":"https://doi.org/10.1371/journal.pcbi.1004941","mag":"2396056682","pmid":"https://pubmed.ncbi.nlm.nih.gov/27203685"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1004941","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1004941","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004941&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004941&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047119765","display_name":"Anwesha Bohler","orcid":"https://orcid.org/0000-0001-7073-5852"},"institutions":[{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Anwesha Bohler","raw_affiliation_strings":["Department of Bioinformatics-BiGCaT, Maastricht University, Maastricht, The Netherlands","Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics-BiGCaT, Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]},{"raw_affiliation_string":"Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006718188","display_name":"Guanming Wu","orcid":"https://orcid.org/0000-0001-8196-1177"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Guanming Wu","raw_affiliation_strings":["Ontario Institute for Cancer Research, MaRS Centre, Toronto, Ontario, Canada"],"affiliations":[{"raw_affiliation_string":"Ontario Institute for Cancer Research, MaRS Centre, Toronto, Ontario, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062841937","display_name":"Martina Kutmon","orcid":null},"institutions":[{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Martina Kutmon","raw_affiliation_strings":["Department of Bioinformatics-BiGCaT, Maastricht University, Maastricht, The Netherlands","Maastricht Centre for Systems Biology (MaCSBio), Maastricht University, Maastricht, The Netherlands","Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics-BiGCaT, Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]},{"raw_affiliation_string":"Maastricht Centre for Systems Biology (MaCSBio), Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]},{"raw_affiliation_string":"Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007183370","display_name":"Leontius Adhika Pradhana","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Leontius Adhika Pradhana","raw_affiliation_strings":["Department of Pharmacy, Faculty of Science, National University of Singapore, Singapore, Republic of Singapore"],"affiliations":[{"raw_affiliation_string":"Department of Pharmacy, Faculty of Science, National University of Singapore, Singapore, Republic of Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088503440","display_name":"Susan L. Coort","orcid":"https://orcid.org/0000-0003-1224-9690"},"institutions":[{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Susan L. Coort","raw_affiliation_strings":["Department of Bioinformatics-BiGCaT, Maastricht University, Maastricht, The Netherlands","Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics-BiGCaT, Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]},{"raw_affiliation_string":"Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063972221","display_name":"Kristina Hanspers","orcid":"https://orcid.org/0000-0001-5410-599X"},"institutions":[{"id":"https://openalex.org/I1321430492","display_name":"Gladstone Institutes","ror":"https://ror.org/038321296","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1321430492"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kristina Hanspers","raw_affiliation_strings":["Gladstone Institutes, San Francisco, California, United States of America"],"affiliations":[{"raw_affiliation_string":"Gladstone Institutes, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I1321430492"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045676311","display_name":"Robin Haw","orcid":"https://orcid.org/0000-0002-2013-7835"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Robin Haw","raw_affiliation_strings":["Ontario Institute for Cancer Research, MaRS Centre, Toronto, Ontario, Canada"],"affiliations":[{"raw_affiliation_string":"Ontario Institute for Cancer Research, MaRS Centre, Toronto, Ontario, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070456387","display_name":"Alexander R. Pico","orcid":"https://orcid.org/0000-0001-5706-2163"},"institutions":[{"id":"https://openalex.org/I1321430492","display_name":"Gladstone Institutes","ror":"https://ror.org/038321296","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1321430492"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander R. Pico","raw_affiliation_strings":["Gladstone Institutes, San Francisco, California, United States of America"],"affiliations":[{"raw_affiliation_string":"Gladstone Institutes, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I1321430492"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075750072","display_name":"Chris T. Evelo","orcid":"https://orcid.org/0000-0002-5301-3142"},"institutions":[{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Chris T. Evelo","raw_affiliation_strings":["Department of Bioinformatics-BiGCaT, Maastricht University, Maastricht, The Netherlands","Maastricht Centre for Systems Biology (MaCSBio), Maastricht University, Maastricht, The Netherlands","Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics-BiGCaT, Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]},{"raw_affiliation_string":"Maastricht Centre for Systems Biology (MaCSBio), Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]},{"raw_affiliation_string":"Department of Bioinformatics\u2014BiGCaT, Maastricht University, Maastricht, The Netherlands","institution_ids":["https://openalex.org/I34352273"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5047119765"],"corresponding_institution_ids":["https://openalex.org/I34352273"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":4.3578,"has_fulltext":true,"cited_by_count":49,"citation_normalized_percentile":{"value":0.94646574,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"12","issue":"5","first_page":"e1004941","last_page":"e1004941"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9847000241279602,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/perspective","display_name":"Perspective (graphical)","score":0.6083366274833679},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35281193256378174},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.16673633456230164}],"concepts":[{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.6083366274833679},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35281193256378174},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.16673633456230164}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1004941","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1004941","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004941&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:27203685","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27203685","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:cris.maastrichtuniversity.nl:openaire/9f4c53f9-dac9-4536-897d-d5f2fc183542","is_oa":true,"landing_page_url":"https://cris.maastrichtuniversity.nl/en/publications/9f4c53f9-dac9-4536-897d-d5f2fc183542","pdf_url":null,"source":{"id":"https://openalex.org/S4306402616","display_name":"Research Publications (Maastricht University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I34352273","host_organization_name":"Maastricht University","host_organization_lineage":["https://openalex.org/I34352273"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bohler, A, Wu, G, Kutmon, M, Pradhana, L A, Steinbusch - Coort, S, Hanspers, K, Haw, R, Pico, A R & Evelo, C T 2016, 'Reactome from a WikiPathways Perspective', PLoS Computational Biology, vol. 12, no. 5, e1004941. https://doi.org/10.1371/journal.pcbi.1004941","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:24e6c2e679944f8ab0fcbdd5ef0d9bd2","is_oa":true,"landing_page_url":"https://doaj.org/article/24e6c2e679944f8ab0fcbdd5ef0d9bd2","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 12, Iss 5, p e1004941 (2016)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/3396535","is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Reactome_from_a_WikiPathways_Perspective/3396535","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pubmedcentral.nih.gov:4874630","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4874630","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1004941","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1004941","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004941&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.4399999976158142,"id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G1068320709","display_name":null,"funder_award_id":"U54GM114833","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2081847799","display_name":null,"funder_award_id":"GM100039, 1U54GM114833-01","funder_id":"https://openalex.org/F4320306080","funder_display_name":"Foundation for the National Institutes of Health"},{"id":"https://openalex.org/G3069185473","display_name":null,"funder_award_id":"U54GM114833-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3678716737","display_name":null,"funder_award_id":"P41 HG003751","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G473593538","display_name":null,"funder_award_id":"Molecular","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G4922965983","display_name":null,"funder_award_id":"GM114833","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G4962920666","display_name":null,"funder_award_id":"U54GM114833","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G5088244120","display_name":null,"funder_award_id":"OGI 5458","funder_id":"https://openalex.org/F4320310787","funder_display_name":"Genome Canada"},{"id":"https://openalex.org/G5846323025","display_name":null,"funder_award_id":"HG003751","funder_id":"https://openalex.org/F4320306080","funder_display_name":"Foundation for the National Institutes of Health"},{"id":"https://openalex.org/G5873405099","display_name":null,"funder_award_id":"1U54GM114833","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G6730254669","display_name":null,"funder_award_id":"1U54GM114833-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7206094169","display_name":null,"funder_award_id":"GM100039","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G8823472414","display_name":null,"funder_award_id":"GM114833","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306080","display_name":"Foundation for the National Institutes of Health","ror":"https://ror.org/00k86s890"},{"id":"https://openalex.org/F4320310787","display_name":"Genome Canada","ror":"https://ror.org/029s29983"},{"id":"https://openalex.org/F4320314023","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2396056682.pdf","grobid_xml":"https://content.openalex.org/works/W2396056682.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W1596305087","https://openalex.org/W1866588896","https://openalex.org/W1964190660","https://openalex.org/W1966654776","https://openalex.org/W1969513604","https://openalex.org/W1980447353","https://openalex.org/W1986902166","https://openalex.org/W1991933056","https://openalex.org/W1999758530","https://openalex.org/W2032002836","https://openalex.org/W2043764521","https://openalex.org/W2047040382","https://openalex.org/W2050629875","https://openalex.org/W2058539819","https://openalex.org/W2067082722","https://openalex.org/W2069157810","https://openalex.org/W2083623855","https://openalex.org/W2087004090","https://openalex.org/W2096939566","https://openalex.org/W2103017472","https://openalex.org/W2117188422","https://openalex.org/W2120680184","https://openalex.org/W2125810455","https://openalex.org/W2129239355","https://openalex.org/W2133730856","https://openalex.org/W2135688339","https://openalex.org/W2138862823","https://openalex.org/W2140611297","https://openalex.org/W2142302575","https://openalex.org/W2143969914","https://openalex.org/W2145748421","https://openalex.org/W2148866288","https://openalex.org/W2149991291","https://openalex.org/W2151120337","https://openalex.org/W2156875759","https://openalex.org/W2159092541","https://openalex.org/W2159675211","https://openalex.org/W2165681080","https://openalex.org/W2186218348","https://openalex.org/W2236080841","https://openalex.org/W2253716072","https://openalex.org/W2406585419","https://openalex.org/W2502930843","https://openalex.org/W3004151993","https://openalex.org/W4230266413","https://openalex.org/W4249388317","https://openalex.org/W4256605237","https://openalex.org/W4285719527","https://openalex.org/W4399649500"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2149537132","https://openalex.org/W2376932109","https://openalex.org/W2018871932","https://openalex.org/W2001405890","https://openalex.org/W641279757"],"abstract_inverted_index":{"Reactome":[0,15,49,66,132,166,188,197],"and":[1,36,48,130,180,189,228],"WikiPathways":[2,27,47,174],"are":[3,17,34,237],"two":[4,57],"of":[5,54,128,139,146,192,218,222,245,259],"the":[6,51,69,79,95,113,117,122,125,144,177,184,190,202,216],"most":[7],"popular":[8],"freely":[9],"available":[10,206],"databases":[11],"for":[12,82,143,224,248,257],"biological":[13,141],"pathways.":[14],"pathways":[16,33,67,167,223,247],"centrally":[18],"curated":[19,38,129],"with":[20],"periodic":[21],"input":[22],"from":[23,176,187,201,215,235],"selected":[24],"domain":[25],"experts.":[26],"is":[28],"a":[29,61,98,102,147,219,242,254],"community-based":[30],"platform":[31],"where":[32],"created":[35,60],"continually":[37],"by":[39,121],"any":[40],"interested":[41],"party.":[42],"The":[43,90,209,230,250],"nascent":[44],"collaboration":[45],"between":[46],"illustrates":[50],"mutual":[52],"benefits":[53,175,200,214],"combining":[55],"these":[56],"approaches.":[58,266],"We":[59],"format":[62,71],"converter":[63],"that":[64],"converts":[65],"to":[68,161,183],"GPML":[70],"used":[72],"in":[73,198,226],"WikiPathways.":[74,208],"In":[75],"addition,":[76],"we":[77,134],"developed":[78,263],"ComplexViz":[80],"plugin":[81,91],"PathVisio":[83,227,236],"which":[84],"simplifies":[85],"looking":[86],"up":[87],"complex":[88,114],"components.":[89],"can":[92,108],"also":[93],"score":[94,107],"complexes":[96],"on":[97,101,112,165,207],"pathway":[99,137,231,261],"based":[100],"user":[103],"defined":[104],"criterion.":[105],"This":[106],"then":[109],"be":[110],"visualized":[111],"nodes":[115],"using":[116,168,241,264],"visualization":[118,172],"options":[119],"provided":[120,182],"plugin.":[123],"Using":[124],"merged":[126],"collection":[127],"converted":[131,186],"pathways,":[133],"demonstrate":[135],"improved":[136],"coverage":[138],"relevant":[140],"processes":[142],"analysis":[145,225],"previously":[148],"described":[149],"polycystic":[150],"ovary":[151],"syndrome":[152],"gene":[153],"expression":[154],"dataset.":[155],"Additionally,":[156],"this":[157],"conversion":[158,251],"allows":[159],"researchers":[160],"visualize":[162],"their":[163],"data":[164,171],"PathVisio's":[169],"advanced":[170],"functionalities.":[173],"dedicated":[178],"focus":[179],"attention":[181],"content":[185],"wealth":[191],"semantic":[193],"information":[194],"about":[195],"interactions.":[196],"turn":[199],"continuous":[203],"community":[204,211],"curation":[205],"research":[210],"at":[212],"large":[213],"availability":[217],"larger":[220,243],"set":[221,244],"Cytoscape.":[229],"statistics":[232],"results":[233],"obtained":[234],"significantly":[238],"better":[239],"when":[240],"candidate":[246],"analysis.":[249],"serves":[252],"as":[253],"general":[255],"model":[256],"integration":[258],"multiple":[260],"resources":[262],"different":[265]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
