{"id":"https://openalex.org/W27104615","doi":"https://doi.org/10.1371/journal.pcbi.1004891","title":"An Investigation into the Relationship Between Language Pattern Encoding and Reading Proficiency in Upper Elementary Grades.","display_name":"An Investigation into the Relationship Between Language Pattern Encoding and Reading Proficiency in Upper Elementary Grades.","publication_year":1970,"publication_date":"1970-03-01","ids":{"openalex":"https://openalex.org/W27104615","doi":"https://doi.org/10.1371/journal.pcbi.1004891","mag":"27104615"},"language":"en","primary_location":{"id":"mag:27104615","is_oa":false,"landing_page_url":"https://files.eric.ed.gov/fulltext/ED039104.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},"type":"article","indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012069811","display_name":"Mattie S. Edwards","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Mattie S. Edwards","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5012069811"],"corresponding_institution_ids":[],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.00405869,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"12","issue":"4","first_page":"e1004891","last_page":"e1004891"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10103","display_name":"Reading and Literacy Development","score":0.9035000205039978,"subfield":{"id":"https://openalex.org/subfields/3204","display_name":"Developmental and Educational Psychology"},"field":{"id":"https://openalex.org/fields/32","display_name":"Psychology"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T10103","display_name":"Reading and Literacy Development","score":0.9035000205039978,"subfield":{"id":"https://openalex.org/subfields/3204","display_name":"Developmental and Educational Psychology"},"field":{"id":"https://openalex.org/fields/32","display_name":"Psychology"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/reading","display_name":"Reading (process)","score":0.6484880447387695},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.5166578888893127},{"id":"https://openalex.org/keywords/encoding","display_name":"Encoding (memory)","score":0.5003890991210938},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4362047612667084},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.3766038715839386},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3735901117324829},{"id":"https://openalex.org/keywords/mathematics-education","display_name":"Mathematics education","score":0.36283624172210693},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.32950064539909363},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3291981816291809},{"id":"https://openalex.org/keywords/arithmetic","display_name":"Arithmetic","score":0.32213830947875977}],"concepts":[{"id":"https://openalex.org/C554936623","wikidata":"https://www.wikidata.org/wiki/Q199657","display_name":"Reading (process)","level":2,"score":0.6484880447387695},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.5166578888893127},{"id":"https://openalex.org/C125411270","wikidata":"https://www.wikidata.org/wiki/Q18653","display_name":"Encoding (memory)","level":2,"score":0.5003890991210938},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4362047612667084},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.3766038715839386},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3735901117324829},{"id":"https://openalex.org/C145420912","wikidata":"https://www.wikidata.org/wiki/Q853077","display_name":"Mathematics education","level":1,"score":0.36283624172210693},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.32950064539909363},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3291981816291809},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.32213830947875977},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"mag:27104615","is_oa":false,"landing_page_url":"https://files.eric.ed.gov/fulltext/ED039104.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8899999856948853,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G1761060845","display_name":null,"funder_award_id":"W911NF-15-2-0065","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"},{"id":"https://openalex.org/G1777555798","display_name":null,"funder_award_id":"1 DP5 OD 009172-02","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G214439962","display_name":null,"funder_award_id":"N00014-15-1-2704","funder_id":"https://openalex.org/F4320337345","funder_display_name":"Office of Naval Research"},{"id":"https://openalex.org/G242339835","display_name":null,"funder_award_id":"U01 GM110714","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G249813034","display_name":null,"funder_award_id":"1U01GM110714-01","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G3324541300","display_name":null,"funder_award_id":"FR\u20102015\u201065795","funder_id":"https://openalex.org/F4320306151","funder_display_name":"Alfred P. Sloan Foundation"},{"id":"https://openalex.org/G3494593282","display_name":null,"funder_award_id":"DP5 OD009172","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4849282228","display_name":null,"funder_award_id":"DP5 OD 009172-02","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306151","display_name":"Alfred P. Sloan Foundation","ror":"https://ror.org/052csg198"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"},{"id":"https://openalex.org/F4320337345","display_name":"Office of Naval Research","ror":"https://ror.org/00rk2pe57"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":2,"referenced_works":["https://openalex.org/W641533480","https://openalex.org/W2799145628"],"related_works":["https://openalex.org/W47149438","https://openalex.org/W122169763","https://openalex.org/W326610035","https://openalex.org/W63236838","https://openalex.org/W237816458","https://openalex.org/W310813715","https://openalex.org/W205686216","https://openalex.org/W302268533","https://openalex.org/W88102093","https://openalex.org/W2775721990","https://openalex.org/W2069828246","https://openalex.org/W167584398","https://openalex.org/W238336983","https://openalex.org/W2990769049","https://openalex.org/W83996139","https://openalex.org/W87016516","https://openalex.org/W27092510","https://openalex.org/W326135398","https://openalex.org/W4462177","https://openalex.org/W93660734"],"abstract_inverted_index":{"ChIP-seq":[0,17,31,112,132,156,179],"enables":[1,176],"genome-scale":[2],"identification":[3],"of":[4,24,75,116,124,134,154,170,228,239,250],"regulatory":[5,138],"regions":[6],"that":[7,44,60,93,100,110,142,151,202,212],"govern":[8],"gene":[9,88,219,251],"expression.":[10,89],"However,":[11],"the":[12,68,135,155,171,195,203,226],"biological":[13],"insights":[14],"generated":[15],"from":[16,243],"analysis":[18],"have":[19],"been":[20],"limited":[21],"to":[22,50,79,83,148,225],"predictions":[23],"binding":[25,45,61,120],"sites":[26,62],"and":[27,86,119,182,211,221],"cooperative":[28],"interactions.":[29],"Furthermore,":[30],"data":[32],"often":[33],"poorly":[34],"correlate":[35],"with":[36,218,223,255],"in":[37,55,103,114,163,189,208,241,253,258],"vitro":[38],"measurements":[39],"or":[40],"predicted":[41],"motifs,":[42],"highlighting":[43],"affinity":[46],"alone":[47,166],"is":[48,59,77,96,127,183,205,215],"insufficient":[49],"explain":[51],"transcription":[52],"factor":[53],"(TF)-binding":[54],"vivo.":[56],"One":[57],"possibility":[58],"are":[63],"not":[64],"equally":[65],"accessible":[66,207],"across":[67],"genome.":[69],"A":[70],"more":[71,206,236],"comprehensive":[72,237],"biophysical":[73],"representation":[74,249],"TF-binding":[76,102,187,240],"required":[78],"improve":[80],"our":[81,174],"ability":[82],"understand,":[84],"predict,":[85],"alter":[87],"Here,":[90],"we":[91],"show":[92],"genome":[94,117,125,145,204],"accessibility":[95,118,126,146,214],"a":[97,107,130,149,160,235,247],"key":[98],"parameter":[99],"impacts":[101],"bacteria.":[104],"We":[105,140,200],"developed":[106],"thermodynamic":[108],"model":[109,150,161,233],"parameterizes":[111],"coverage":[113],"terms":[115],"affinity.":[121],"The":[122],"role":[123],"validated":[128],"using":[129],"large-scale":[131],"dataset":[133],"M.":[136],"tuberculosis":[137],"network.":[139],"find":[141],"accounting":[143],"for":[144,185,197],"led":[147],"explains":[152,167],"63%":[153],"profile":[157],"variance,":[158],"while":[159],"based":[162],"motif":[164],"score":[165],"only":[168],"35%":[169],"variance.":[172],"Moreover,":[173],"framework":[175],"de":[177],"novo":[178],"peak":[180],"prediction":[181],"useful":[184],"inferring":[186],"peaks":[188],"new":[190],"experimental":[191],"conditions":[192],"by":[193],"reducing":[194],"need":[196],"additional":[198],"experiments.":[199],"observe":[201],"intergenic":[209],"regions,":[210],"increased":[213],"positively":[216],"correlated":[217],"expression":[220],"anti-correlated":[222],"distance":[224],"origin":[227],"replication.":[229],"Our":[230],"biophysically":[231],"motivated":[232],"provides":[234],"description":[238],"vivo":[242],"first":[244],"principles":[245],"towards":[246],"better":[248],"regulation":[252],"silico,":[254],"promising":[256],"applications":[257],"systems":[259],"biology.":[260]},"counts_by_year":[],"updated_date":"2026-06-24T13:16:06.693445","created_date":"2016-06-24T00:00:00"}
