{"id":"https://openalex.org/W2466857505","doi":"https://doi.org/10.1371/journal.pcbi.1004824","title":"Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data","display_name":"Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data","publication_year":2016,"publication_date":"2016-06-30","ids":{"openalex":"https://openalex.org/W2466857505","doi":"https://doi.org/10.1371/journal.pcbi.1004824","mag":"2466857505","pmid":"https://pubmed.ncbi.nlm.nih.gov/27362949"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1004824","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1004824","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004824&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004824&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113596962","display_name":"John O\u2019Brien","orcid":null},"institutions":[{"id":"https://openalex.org/I135474949","display_name":"Bowdoin College","ror":"https://ror.org/03gh96r95","country_code":"US","type":"education","lineage":["https://openalex.org/I135474949"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"John D. O\u2019Brien","raw_affiliation_strings":["Mathematics Department, Bowdoin College, Brunswick, Maine, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mathematics Department, Bowdoin College, Brunswick, Maine, United States of America","institution_ids":["https://openalex.org/I135474949"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078769186","display_name":"Zamin Iqbal","orcid":"https://orcid.org/0000-0001-8466-7547"},"institutions":[{"id":"https://openalex.org/I1336263701","display_name":"Centre for Human Genetics","ror":"https://ror.org/01rjnta51","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1336263701","https://openalex.org/I40120149"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Zamin Iqbal","raw_affiliation_strings":["Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, Oxfordshire, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0001-8466-7547","affiliations":[{"raw_affiliation_string":"Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, Oxfordshire, United Kingdom","institution_ids":["https://openalex.org/I1336263701","https://openalex.org/I40120149"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070617353","display_name":"Jason Wendler","orcid":"https://orcid.org/0000-0003-4195-8138"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jason Wendler","raw_affiliation_strings":["Pacific Northwest National Laboratory, Richland, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-4195-8138","affiliations":[{"raw_affiliation_string":"Pacific Northwest National Laboratory, Richland, Washington, United States of America","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067928767","display_name":"Lucas Amenga\u2013Etego","orcid":"https://orcid.org/0000-0003-4468-0506"},"institutions":[{"id":"https://openalex.org/I1336263701","display_name":"Centre for Human Genetics","ror":"https://ror.org/01rjnta51","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1336263701","https://openalex.org/I40120149"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I4210142844","display_name":"Navrongo Health Research Centre","ror":"https://ror.org/04n6sse75","country_code":"GH","type":"healthcare","lineage":["https://openalex.org/I4210142844"]}],"countries":["GB","GH"],"is_corresponding":true,"raw_author_name":"Lucas Amenga-Etego","raw_affiliation_strings":["Navrongo Health Research Centre, Navrongo, Upper East Region, Ghana","Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, Oxfordshire, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Navrongo Health Research Centre, Navrongo, Upper East Region, Ghana","institution_ids":["https://openalex.org/I4210142844"]},{"raw_affiliation_string":"Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, Oxfordshire, United Kingdom","institution_ids":["https://openalex.org/I1336263701","https://openalex.org/I40120149"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5067928767","https://openalex.org/A5070617353","https://openalex.org/A5078769186","https://openalex.org/A5113596962"],"corresponding_institution_ids":["https://openalex.org/I1336263701","https://openalex.org/I135474949","https://openalex.org/I142606810","https://openalex.org/I40120149","https://openalex.org/I4210142844"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":5.8597,"has_fulltext":true,"cited_by_count":34,"citation_normalized_percentile":{"value":0.96372951,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"12","issue":"6","first_page":"e1004824","last_page":"e1004824"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10091","display_name":"Malaria Research and Control","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10091","display_name":"Malaria Research and Control","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10340","display_name":"Hepatitis B Virus Studies","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10296","display_name":"Vector-borne infectious diseases","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/2405","display_name":"Parasitology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/plasmodium-falciparum","display_name":"Plasmodium falciparum","score":0.7703869938850403},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5916267037391663},{"id":"https://openalex.org/keywords/strain","display_name":"Strain (injury)","score":0.572342574596405},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4962051510810852},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4871461093425751},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.481500506401062},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.43059226870536804},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.27810361981391907},{"id":"https://openalex.org/keywords/malaria","display_name":"Malaria","score":0.21061119437217712},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.105762779712677}],"concepts":[{"id":"https://openalex.org/C2778371730","wikidata":"https://www.wikidata.org/wiki/Q311383","display_name":"Plasmodium falciparum","level":3,"score":0.7703869938850403},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5916267037391663},{"id":"https://openalex.org/C2778022156","wikidata":"https://www.wikidata.org/wiki/Q576145","display_name":"Strain (injury)","level":2,"score":0.572342574596405},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4962051510810852},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4871461093425751},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.481500506401062},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.43059226870536804},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.27810361981391907},{"id":"https://openalex.org/C2778048844","wikidata":"https://www.wikidata.org/wiki/Q12156","display_name":"Malaria","level":2,"score":0.21061119437217712},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.105762779712677},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010963","descriptor_name":"Plasmodium falciparum","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D010963","descriptor_name":"Plasmodium falciparum","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D010963","descriptor_name":"Plasmodium falciparum","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D010963","descriptor_name":"Plasmodium falciparum","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D010963","descriptor_name":"Plasmodium falciparum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010963","descriptor_name":"Plasmodium falciparum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010963","descriptor_name":"Plasmodium falciparum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010963","descriptor_name":"Plasmodium falciparum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016054","descriptor_name":"DNA, Protozoan","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016054","descriptor_name":"DNA, Protozoan","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016054","descriptor_name":"DNA, Protozoan","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016054","descriptor_name":"DNA, Protozoan","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pcbi.1004824","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1004824","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004824&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},{"id":"pmid:27362949","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27362949","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:RePEc:plo:pcbi00:1004824","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004824","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:7541d4827f5e4369a144bdeb6811253a","is_oa":true,"landing_page_url":"https://doaj.org/article/7541d4827f5e4369a144bdeb6811253a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 12, Iss 6, p e1004824 (2016)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:3913908","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4928962","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:figshare.com:article/3918432","is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Inferring_Strain_Mixture_within_Clinical_i_Plasmodium_falciparum_i_Isolates_from_Genomic_Sequence_Data/3918432","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:ora.ox.ac.uk:uuid:a6f150f5-2d93-4a5a-b7a3-21bf4ae0760c","is_oa":false,"landing_page_url":"https://ora.ox.ac.uk/objects/uuid:a6f150f5-2d93-4a5a-b7a3-21bf4ae0760c","pdf_url":null,"source":{"id":"https://openalex.org/S4306402636","display_name":"Oxford University Research Archive (ORA) (University of Oxford)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I40120149","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/I40120149"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Symplectic Elements at Oxford","raw_type":"Journal article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1004824","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1004824","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004824&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7099999785423279,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1150480236","display_name":null,"funder_award_id":"102541/Z/13/Z","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G1201428007","display_name":null,"funder_award_id":"MR/M006212/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G3871423740","display_name":null,"funder_award_id":"102541/Z/13/Z","funder_id":"https://openalex.org/F4320320006","funder_display_name":"Royal Society"},{"id":"https://openalex.org/G499500337","display_name":null,"funder_award_id":"G0600718","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G5567081764","display_name":null,"funder_award_id":"102541","funder_id":"https://openalex.org/F4320320006","funder_display_name":"Royal Society"},{"id":"https://openalex.org/G8785346415","display_name":null,"funder_award_id":"102541/Z/13/Z","funder_id":"https://openalex.org/F4320307874","funder_display_name":"Wellcome"}],"funders":[{"id":"https://openalex.org/F4320307874","display_name":"Wellcome","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320320006","display_name":"Royal Society","ror":"https://ror.org/03wnrjx87"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2466857505.pdf","grobid_xml":"https://content.openalex.org/works/W2466857505.grobid-xml"},"referenced_works_count":57,"referenced_works":["https://openalex.org/W1539550814","https://openalex.org/W1579271636","https://openalex.org/W1579500068","https://openalex.org/W1582614941","https://openalex.org/W1808779235","https://openalex.org/W1940072256","https://openalex.org/W1973603244","https://openalex.org/W1977022449","https://openalex.org/W1981367467","https://openalex.org/W1984669077","https://openalex.org/W1987311633","https://openalex.org/W1995833178","https://openalex.org/W1997287305","https://openalex.org/W1997476591","https://openalex.org/W1998767027","https://openalex.org/W2004722739","https://openalex.org/W2006352451","https://openalex.org/W2009146673","https://openalex.org/W2010786361","https://openalex.org/W2019851585","https://openalex.org/W2037350416","https://openalex.org/W2045656233","https://openalex.org/W2048971218","https://openalex.org/W2048980311","https://openalex.org/W2052948324","https://openalex.org/W2061243277","https://openalex.org/W2061658473","https://openalex.org/W2067428749","https://openalex.org/W2068739885","https://openalex.org/W2070377272","https://openalex.org/W2071911321","https://openalex.org/W2073186204","https://openalex.org/W2074223924","https://openalex.org/W2076050649","https://openalex.org/W2094206246","https://openalex.org/W2110755408","https://openalex.org/W2110904326","https://openalex.org/W2110968330","https://openalex.org/W2111307685","https://openalex.org/W2112428133","https://openalex.org/W2113510423","https://openalex.org/W2135697415","https://openalex.org/W2135768356","https://openalex.org/W2144207524","https://openalex.org/W2149995464","https://openalex.org/W2151058217","https://openalex.org/W2151105515","https://openalex.org/W2155925360","https://openalex.org/W2162558450","https://openalex.org/W2170874271","https://openalex.org/W2299359241","https://openalex.org/W2462885157","https://openalex.org/W2952962132","https://openalex.org/W4231311503","https://openalex.org/W4241516881","https://openalex.org/W4248681815","https://openalex.org/W6634685263"],"related_works":["https://openalex.org/W2374896030","https://openalex.org/W25995060","https://openalex.org/W1922485897","https://openalex.org/W1495625963","https://openalex.org/W2131308200","https://openalex.org/W2434457435","https://openalex.org/W2144038468","https://openalex.org/W1980699373","https://openalex.org/W2031675782","https://openalex.org/W2053972265"],"abstract_inverted_index":{"We":[0,83],"present":[1],"a":[2,92],"rigorous":[3],"statistical":[4],"model":[5,46,75,90],"that":[6],"infers":[7],"the":[8,14,22,25,45,74,85],"structure":[9],"of":[10,16,27,88],"P.":[11],"falciparum":[12],"mixtures-including":[13],"number":[15],"strains":[17],"present,":[18],"their":[19],"proportion":[20],"within":[21],"samples,":[23,44],"and":[24,42,59,70,99],"amount":[26],"unexplained":[28],"mixture-using":[29],"whole":[30],"genome":[31],"sequence":[32],"(WGS)":[33],"data.":[34],"Applied":[35],"to":[36],"simulation":[37],"data,":[38],"artificial":[39],"laboratory":[40],"mixtures,":[41],"field":[43],"provides":[47],"reasonable":[48],"inference":[49],"with":[50,63],"as":[51,53,91],"few":[52],"10":[54],"reads":[55],"or":[56],"50":[57],"SNPs":[58],"works":[60],"efficiently":[61],"even":[62],"much":[64],"larger":[65],"data":[66,72],"sets.":[67],"Source":[68],"code":[69],"example":[71],"for":[73,97],"are":[76],"provided":[77],"in":[78],"an":[79],"open":[80],"source":[81],"fashion.":[82],"discuss":[84],"possible":[86],"uses":[87],"this":[89],"window":[93],"into":[94],"within-host":[95],"selection":[96],"clinical":[98],"epidemiological":[100],"studies.":[101]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
