{"id":"https://openalex.org/W2058746325","doi":"https://doi.org/10.1371/journal.pcbi.1004013","title":"What Makes a Protein Sequence a Prion?","display_name":"What Makes a Protein Sequence a Prion?","publication_year":2015,"publication_date":"2015-01-08","ids":{"openalex":"https://openalex.org/W2058746325","doi":"https://doi.org/10.1371/journal.pcbi.1004013","mag":"2058746325","pmid":"https://pubmed.ncbi.nlm.nih.gov/25569335"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1004013","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1004013","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004013&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004013&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051025265","display_name":"Raimon Sabat\u00e9","orcid":"https://orcid.org/0000-0003-3894-2362"},"institutions":[{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I4401200369","display_name":"Institut de Nanoci\u00e8ncia i Nanotecnologia de la Universitat de Barcelona","ror":"https://ror.org/034nc1205","country_code":null,"type":"facility","lineage":["https://openalex.org/I4401200369","https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Raimon Sabate","raw_affiliation_strings":["Departament de Fisicoqu\u00edmica, Facultat de Farm\u00e0cia, Universitat de Barcelona, Barcelona, Spain; Institut de Nanoci\u00e8ncia i Nanotecnologia (IN2UB), Universitat de Barcelona, Barcelona, Spain","Departament de Fisicoqu\u00edmica, Facultat de Farm\u00e0cia, Universitat de Barcelona, Barcelona, Spain","Institut de Nanoci\u00e8ncia i Nanotecnologia (IN2UB), Universitat de Barcelona, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament de Fisicoqu\u00edmica, Facultat de Farm\u00e0cia, Universitat de Barcelona, Barcelona, Spain; Institut de Nanoci\u00e8ncia i Nanotecnologia (IN2UB), Universitat de Barcelona, Barcelona, Spain","institution_ids":[]},{"raw_affiliation_string":"Departament de Fisicoqu\u00edmica, Facultat de Farm\u00e0cia, Universitat de Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]},{"raw_affiliation_string":"Institut de Nanoci\u00e8ncia i Nanotecnologia (IN2UB), Universitat de Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I4401200369","https://openalex.org/I71999127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008256216","display_name":"Fr\u00e9d\u00e9ric Rousseau","orcid":"https://orcid.org/0000-0002-9189-7399"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]},{"id":"https://openalex.org/I4210153928","display_name":"VIB-KU Leuven Center for Brain & Disease Research","ror":"https://ror.org/045c7t348","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I4210153928","https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Frederic Rousseau","raw_affiliation_strings":["VIB Switch Laboratory, VIB, Leuven, Belgium; Departement for Cellular and Molecular Medicine, KU Leuven, Leuven, Belgium","Departement for Cellular and Molecular Medicine, KU Leuven, Leuven, Belgium","VIB Switch Laboratory, VIB, Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"VIB Switch Laboratory, VIB, Leuven, Belgium; Departement for Cellular and Molecular Medicine, KU Leuven, Leuven, Belgium","institution_ids":[]},{"raw_affiliation_string":"Departement for Cellular and Molecular Medicine, KU Leuven, Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"VIB Switch Laboratory, VIB, Leuven, Belgium","institution_ids":["https://openalex.org/I4210153928"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031589452","display_name":"Joost Schymkowitz","orcid":"https://orcid.org/0000-0003-2020-0168"},"institutions":[{"id":"https://openalex.org/I4210153928","display_name":"VIB-KU Leuven Center for Brain & Disease Research","ror":"https://ror.org/045c7t348","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I4210153928","https://openalex.org/I99464096"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Joost Schymkowitz","raw_affiliation_strings":["VIB Switch Laboratory, VIB, Leuven, Belgium; Departement for Cellular and Molecular Medicine, KU Leuven, Leuven, Belgium","Departement for Cellular and Molecular Medicine, KU Leuven, Leuven, Belgium","VIB Switch Laboratory, VIB, Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"VIB Switch Laboratory, VIB, Leuven, Belgium; Departement for Cellular and Molecular Medicine, KU Leuven, Leuven, Belgium","institution_ids":[]},{"raw_affiliation_string":"Departement for Cellular and Molecular Medicine, KU Leuven, Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"VIB Switch Laboratory, VIB, Leuven, Belgium","institution_ids":["https://openalex.org/I4210153928"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025858582","display_name":"Salvador Ventura","orcid":"https://orcid.org/0000-0002-9652-6351"},"institutions":[{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Salvador Ventura","raw_affiliation_strings":["Institut de Biotecnologia i de Biomedicina, Universitat Aut\u00f2noma de Barcelona, Bellaterra, Spain; Departament de Bioqu\u00edmica i Biologia Molecular, Universitat Aut\u00f2noma de Barcelona, Bellaterra, Spain","Institut de Biotecnologia i de Biomedicina, Universitat Aut\u00f2noma de Barcelona, Bellaterra, Spain","Departament de Bioqu\u00edmica i Biologia Molecular, Universitat Aut\u00f2noma de Barcelona, Bellaterra, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut de Biotecnologia i de Biomedicina, Universitat Aut\u00f2noma de Barcelona, Bellaterra, Spain; Departament de Bioqu\u00edmica i Biologia Molecular, Universitat Aut\u00f2noma de Barcelona, Bellaterra, Spain","institution_ids":[]},{"raw_affiliation_string":"Institut de Biotecnologia i de Biomedicina, Universitat Aut\u00f2noma de Barcelona, Bellaterra, Spain","institution_ids":["https://openalex.org/I123044942"]},{"raw_affiliation_string":"Departament de Bioqu\u00edmica i Biologia Molecular, Universitat Aut\u00f2noma de Barcelona, Bellaterra, Spain","institution_ids":["https://openalex.org/I123044942"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5025858582","https://openalex.org/A5051025265"],"corresponding_institution_ids":["https://openalex.org/I123044942","https://openalex.org/I4401200369","https://openalex.org/I71999127"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":4.6682,"has_fulltext":true,"cited_by_count":94,"citation_normalized_percentile":{"value":0.95521563,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"11","issue":"1","first_page":"e1004013","last_page":"e1004013"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11335","display_name":"Prion Diseases and Protein Misfolding","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11335","display_name":"Prion Diseases and Protein Misfolding","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10086","display_name":"Alzheimer's disease research and treatments","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12770","display_name":"Amino Acid Enzymes and Metabolism","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1303","display_name":"Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6629999876022339},{"id":"https://openalex.org/keywords/asparagine","display_name":"Asparagine","score":0.6461477875709534},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6271228790283203},{"id":"https://openalex.org/keywords/amyloid","display_name":"Amyloid (mycology)","score":0.5791614651679993},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5350139737129211},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5343218445777893},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.530700147151947},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.5079260468482971},{"id":"https://openalex.org/keywords/prion-protein","display_name":"Prion protein","score":0.4845808744430542},{"id":"https://openalex.org/keywords/glutamine","display_name":"Glutamine","score":0.41772767901420593},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.36012858152389526},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.3323783576488495},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.08277106285095215},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.07914614677429199},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07302528619766235}],"concepts":[{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6629999876022339},{"id":"https://openalex.org/C2775895851","wikidata":"https://www.wikidata.org/wiki/Q185906","display_name":"Asparagine","level":3,"score":0.6461477875709534},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6271228790283203},{"id":"https://openalex.org/C2777633098","wikidata":"https://www.wikidata.org/wiki/Q2736051","display_name":"Amyloid (mycology)","level":2,"score":0.5791614651679993},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5350139737129211},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5343218445777893},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.530700147151947},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.5079260468482971},{"id":"https://openalex.org/C3019804061","wikidata":"https://www.wikidata.org/wiki/Q14881255","display_name":"Prion protein","level":3,"score":0.4845808744430542},{"id":"https://openalex.org/C2779349466","wikidata":"https://www.wikidata.org/wiki/Q181619","display_name":"Glutamine","level":3,"score":0.41772767901420593},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.36012858152389526},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.3323783576488495},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.08277106285095215},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.07914614677429199},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07302528619766235},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D000682","descriptor_name":"Amyloid","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000682","descriptor_name":"Amyloid","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000682","descriptor_name":"Amyloid","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000682","descriptor_name":"Amyloid","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000682","descriptor_name":"Amyloid","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000682","descriptor_name":"Amyloid","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":11,"locations":[{"id":"doi:10.1371/journal.pcbi.1004013","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1004013","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004013&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},{"id":"pmid:25569335","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25569335","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:diposit.ub.edu:2445/102347","is_oa":true,"landing_page_url":"https://hdl.handle.net/2445/102347","pdf_url":null,"source":{"id":"https://openalex.org/S4306401653","display_name":"Dip\u00f2sit Digital de la Universitat de Barcelona (Universitat de Barcelona)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I71999127","host_organization_name":"Universitat de Barcelona","host_organization_lineage":["https://openalex.org/I71999127"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Articles publicats en revistes (Farm\u00e0cia, Tecnologia Farmac\u00e8utica i Fisicoqu\u00edmica)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.804.196","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.804.196","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/0e/d1/pcbi.1004013.PMC4288708.pdf","raw_type":"text"},{"id":"pmh:oai:ddd.uab.cat:185230","is_oa":true,"landing_page_url":"https://ddd.uab.cat/record/185230","pdf_url":null,"source":{"id":"https://openalex.org/S4306400380","display_name":"Dip\u00f2sit Digital de Documents de la UAB (Universitat Aut\u00f2noma de Barcelona)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I123044942","host_organization_name":"Universitat Aut\u00f2noma de Barcelona","host_organization_lineage":["https://openalex.org/I123044942"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:dnet:uabarcelona_::fff982abb9b62173a50151c4b386da1d","is_oa":true,"landing_page_url":"http://ddd.uab.cat/record/185230","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:e9e3bd1cf14a43159ac748faf14c5d4f","is_oa":true,"landing_page_url":"https://doaj.org/article/e9e3bd1cf14a43159ac748faf14c5d4f","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 11, Iss 1, p e1004013 (2015)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/1286425","is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/_What_Makes_a_Protein_Sequence_a_Prion_/1286425","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:lirias2repo.kuleuven.be:123456789/478485","is_oa":true,"landing_page_url":"http://dx.plos.org/10.1371/journal.pcbi.1004013","pdf_url":null,"source":{"id":"https://openalex.org/S4306401954","display_name":"Lirias (KU Leuven)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I99464096","host_organization_name":"KU Leuven","host_organization_lineage":["https://openalex.org/I99464096"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, vol. 11 (1), Art.No. ARTN e1004013","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:4288708","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4288708","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:www.recercat.cat:2072/267114","is_oa":true,"landing_page_url":"http://hdl.handle.net/2445/102347","pdf_url":null,"source":{"id":"https://openalex.org/S4306402147","display_name":"RECERCAT (Consorci de Serveis Universitaris de Catalunya)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210090028","host_organization_name":"Consorci de Serveis Universitaris de Catalunya","host_organization_lineage":["https://openalex.org/I4210090028"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1004013","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1004013","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004013&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321505","display_name":"Generalitat de Catalunya","ror":"https://ror.org/01bg62x04"},{"id":"https://openalex.org/F4320321730","display_name":"Fonds Wetenschappelijk Onderzoek","ror":"https://ror.org/03qtxy027"},{"id":"https://openalex.org/F4320322121","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230"},{"id":"https://openalex.org/F4320327336","display_name":"Vlaamse regering","ror":null},{"id":"https://openalex.org/F4320334830","display_name":"Ag\u00e8ncia de Gesti\u00f3 d'Ajuts Universitaris i de Recerca","ror":"https://ror.org/01n4pqe45"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2058746325.pdf","grobid_xml":"https://content.openalex.org/works/W2058746325.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W1965286266","https://openalex.org/W1968726777","https://openalex.org/W1972798923","https://openalex.org/W1977034658","https://openalex.org/W1977267085","https://openalex.org/W1978959047","https://openalex.org/W1982797857","https://openalex.org/W1995646291","https://openalex.org/W2000204824","https://openalex.org/W2005763227","https://openalex.org/W2009624913","https://openalex.org/W2012108346","https://openalex.org/W2012385113","https://openalex.org/W2013145010","https://openalex.org/W2014297210","https://openalex.org/W2017754448","https://openalex.org/W2028510176","https://openalex.org/W2034942377","https://openalex.org/W2043876754","https://openalex.org/W2060983898","https://openalex.org/W2067682626","https://openalex.org/W2072613948","https://openalex.org/W2079615523","https://openalex.org/W2091441518","https://openalex.org/W2099340107","https://openalex.org/W2105818305","https://openalex.org/W2106533005","https://openalex.org/W2114185596","https://openalex.org/W2116063507","https://openalex.org/W2117537971","https://openalex.org/W2119651404","https://openalex.org/W2121543180","https://openalex.org/W2128311557","https://openalex.org/W2129602427","https://openalex.org/W2131965976","https://openalex.org/W2132121416","https://openalex.org/W2133338797","https://openalex.org/W2138906088","https://openalex.org/W2139418286","https://openalex.org/W2141110287","https://openalex.org/W2149472608","https://openalex.org/W2150780222","https://openalex.org/W2161004584","https://openalex.org/W2165186407"],"related_works":["https://openalex.org/W2374232366","https://openalex.org/W3176317447","https://openalex.org/W2783201301","https://openalex.org/W1533598637","https://openalex.org/W2967582727","https://openalex.org/W2431577519","https://openalex.org/W3123453024","https://openalex.org/W2613121588","https://openalex.org/W3214722919","https://openalex.org/W2395903329"],"abstract_inverted_index":{"Typical":[0],"amyloid":[1,166],"diseases":[2],"such":[3],"as":[4],"Alzheimer's":[5],"and":[6,116,139,150,168],"Parkinson's":[7],"were":[8],"thought":[9],"to":[10,44],"exclusively":[11],"result":[12],"from":[13],"de":[14],"novo":[15],"aggregation,":[16],"but":[17],"recently":[18],"it":[19,51,87,111],"was":[20],"shown":[21],"that":[22,86,101,110,123,130],"amyloids":[23],"formed":[24],"in":[25,31,61,156,158],"one":[26],"cell":[27],"can":[28],"cross-seed":[29],"aggregation":[30],"other":[32],"cells,":[33],"following":[34],"a":[35,144,162],"prion-like":[36],"mechanism.":[37],"Despite":[38],"the":[39,46,62,74,89,114,137,147,159],"large":[40,78],"experimental":[41],"effort":[42],"devoted":[43],"understanding":[45],"phenomenon":[47],"of":[48,76,93,118,152,161],"prion":[49,68,133,153,169],"transmissibility,":[50],"is":[52,59,71,88,112],"still":[53],"poorly":[54],"understood":[55],"how":[56],"this":[57],"property":[58],"encoded":[60],"primary":[63],"sequence.":[64],"In":[65],"many":[66],"cases,":[67],"structural":[69,138],"conversion":[70],"driven":[72],"by":[73,136],"presence":[75,115],"relatively":[77],"glutamine/asparagine":[79],"(Q/N)":[80],"enriched":[81],"segments.":[82],"Several":[83],"studies":[84],"suggest":[85],"amino":[90],"acid":[91],"composition":[92],"these":[94],"regions":[95,129],"rather":[96],"than":[97],"their":[98,104,132],"specific":[99,119],"sequence":[100],"accounts":[102],"for":[103,146,165],"priogenicity.":[105],"However,":[106],"our":[107],"analysis":[108],"indicates":[109],"instead":[113],"potency":[117],"short":[120],"amyloid-prone":[121],"sequences":[122,155],"occur":[124],"within":[125],"intrinsically":[126],"disordered":[127],"Q/N-rich":[128],"determine":[131],"behaviour,":[134],"modulated":[135],"compositional":[140],"context.":[141],"This":[142],"provides":[143],"basis":[145],"accurate":[148],"identification":[149],"evaluation":[151],"candidate":[154],"proteomes":[157],"context":[160],"unified":[163],"framework":[164],"formation":[167],"propagation.":[170]},"counts_by_year":[{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":13},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":7}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
