{"id":"https://openalex.org/W1984982520","doi":"https://doi.org/10.1371/journal.pcbi.1003951","title":"The HIV Mutation Browser: A Resource for Human Immunodeficiency Virus Mutagenesis and Polymorphism Data","display_name":"The HIV Mutation Browser: A Resource for Human Immunodeficiency Virus Mutagenesis and Polymorphism Data","publication_year":2014,"publication_date":"2014-12-04","ids":{"openalex":"https://openalex.org/W1984982520","doi":"https://doi.org/10.1371/journal.pcbi.1003951","mag":"1984982520","pmid":"https://pubmed.ncbi.nlm.nih.gov/25474213"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1003951","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1003951","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1003951&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1003951&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088993735","display_name":"Norman E. Davey","orcid":"https://orcid.org/0000-0001-6988-4850"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]},{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE","US"],"is_corresponding":false,"raw_author_name":"Norman E. Davey","raw_affiliation_strings":["Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany; Department of Physiology and Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, California, United States of America","Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","Department of Physiology and Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, California, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany; Department of Physiology and Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I4210153543"]},{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]},{"raw_affiliation_string":"Department of Physiology and Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088017410","display_name":"Venkata Satagopam","orcid":"https://orcid.org/0000-0002-6532-5880"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Venkata P. Satagopam","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine, Belval, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056884505","display_name":"Salvador Santiago-Mozos","orcid":null},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Salvador Santiago-Mozos","raw_affiliation_strings":["Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052352078","display_name":"Carlos Villacorta-Mart\u00edn","orcid":"https://orcid.org/0000-0002-1350-465X"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Carlos Villacorta-Martin","raw_affiliation_strings":["Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026479727","display_name":"Tanmay A. M. Bharat","orcid":"https://orcid.org/0000-0002-0168-0277"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tanmay A. M. Bharat","raw_affiliation_strings":["Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079833473","display_name":"Reinhard Schneider","orcid":"https://orcid.org/0000-0002-8278-1618"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":true,"raw_author_name":"Reinhard Schneider","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine, Belval, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028628838","display_name":"John A. G. Briggs","orcid":"https://orcid.org/0000-0003-3990-6910"},"institutions":[{"id":"https://openalex.org/I1303691731","display_name":"European Molecular Biology Organization","ror":"https://ror.org/04wfr2810","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I1303691731"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]},{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"John A. G. Briggs","raw_affiliation_strings":["Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany; Molecular Medicine Partnership Unit, EMBL/Universit\u00e4tsklinikum Heidelberg, Heidelberg, Germany","Molecular Medicine Partnership Unit, EMBL/Universit\u00e4tsklinikum Heidelberg, Heidelberg, Germany","Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany; Molecular Medicine Partnership Unit, EMBL/Universit\u00e4tsklinikum Heidelberg, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303691731","https://openalex.org/I223822909","https://openalex.org/I2802164966","https://openalex.org/I4210138560","https://openalex.org/I4210153543"]},{"raw_affiliation_string":"Molecular Medicine Partnership Unit, EMBL/Universit\u00e4tsklinikum Heidelberg, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303691731","https://openalex.org/I223822909","https://openalex.org/I2802164966"]},{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5028628838","https://openalex.org/A5079833473"],"corresponding_institution_ids":["https://openalex.org/I1303691731","https://openalex.org/I186903577","https://openalex.org/I223822909","https://openalex.org/I2802164966","https://openalex.org/I4210138560","https://openalex.org/I4210153543"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":1.1696,"has_fulltext":true,"cited_by_count":28,"citation_normalized_percentile":{"value":0.76535955,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"10","issue":"12","first_page":"e1003951","last_page":"e1003951"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/human-immunodeficiency-virus","display_name":"Human immunodeficiency virus (HIV)","score":0.6686474084854126},{"id":"https://openalex.org/keywords/mutagenesis","display_name":"Mutagenesis","score":0.626926600933075},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5898414254188538},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5623077154159546},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.5362301468849182},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.47643572092056274},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.44399333000183105},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15198320150375366}],"concepts":[{"id":"https://openalex.org/C3013748606","wikidata":"https://www.wikidata.org/wiki/Q15787","display_name":"Human immunodeficiency virus (HIV)","level":2,"score":0.6686474084854126},{"id":"https://openalex.org/C16318435","wikidata":"https://www.wikidata.org/wiki/Q149299","display_name":"Mutagenesis","level":4,"score":0.626926600933075},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5898414254188538},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5623077154159546},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.5362301468849182},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.47643572092056274},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44399333000183105},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15198320150375366}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pcbi.1003951","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1003951","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1003951&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},{"id":"pmid:25474213","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25474213","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.819.893","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.819.893","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/27/48/pcbi.1003951.PMC4256008.pdf","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:8e6f4c69bb7b49c3853f2bd2bcbebf3c","is_oa":true,"landing_page_url":"https://doaj.org/article/8e6f4c69bb7b49c3853f2bd2bcbebf3c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 10, Iss 12, p e1003951 (2014)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/1260980","is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/_The_HIV_Mutation_Browser_A_Resource_for_Human_Immunodeficiency_Virus_Mutagenesis_and_Polymorphism_Data_/1260980","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:orbilu.uni.lu:10993/24363","is_oa":true,"landing_page_url":"https://orbilu.uni.lu/handle/10993/24363","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology (2014)","raw_type":"http://purl.org/coar/resource_type/c_6501"},{"id":"pmh:oai:pubmedcentral.nih.gov:4256008","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4256008","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1003951","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1003951","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1003951&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.4099999964237213}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1984982520.pdf"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1975622992","https://openalex.org/W1982635910","https://openalex.org/W1987522618","https://openalex.org/W2021064407","https://openalex.org/W2021067210","https://openalex.org/W2059044388","https://openalex.org/W2104410034","https://openalex.org/W2120681671","https://openalex.org/W2131285447","https://openalex.org/W2133018204","https://openalex.org/W2138807684","https://openalex.org/W2150215096","https://openalex.org/W2155518941","https://openalex.org/W2160378127","https://openalex.org/W2161199282","https://openalex.org/W2168708922","https://openalex.org/W2605068739","https://openalex.org/W4297914773"],"related_works":["https://openalex.org/W1576852562","https://openalex.org/W3141735581","https://openalex.org/W191244194","https://openalex.org/W2386140904","https://openalex.org/W1827023575","https://openalex.org/W2411516357","https://openalex.org/W2007930761","https://openalex.org/W2106106031","https://openalex.org/W1507987608","https://openalex.org/W2032247992"],"abstract_inverted_index":{"Huge":[0],"research":[1,35,65,84,221],"effort":[2,36,202],"has":[3],"been":[4],"invested":[5],"over":[6],"many":[7],"years":[8],"to":[9,49,103,186,203],"determine":[10],"the":[11,40,60,68,82,92,112,117,136,144,149,159,164,187,205,220],"phenotypes":[12,23,150],"of":[13,21,28,33,143,151,166,193,207],"natural":[14],"or":[15,67],"artificial":[16],"mutations":[17,154],"in":[18,39,158,177],"HIV":[19,83,94,113,137,145,160,194,208,211,224],"proteins--interpretation":[20],"mutation":[22,95,138,146,170,212,225],"is":[24,45,77,175,184,227],"an":[25],"invaluable":[26],"source":[27],"new":[29,217],"knowledge.":[30],"The":[31,140,169,191,210,223],"results":[32],"this":[34],"are":[37,73],"recorded":[38],"scientific":[41],"literature,":[42,114],"but":[43],"it":[44,131],"difficult":[46],"for":[47,172,219],"virologists":[48],"rapidly":[50],"find":[51],"it.":[52],"Manually":[53],"locating":[54],"data":[55,118],"on":[56],"phenotypic":[57],"variation":[58],"within":[59],"approximately":[61],"270,000":[62],"available":[63,93,228],"HIV-related":[64],"articles,":[66],"further":[69],"1,500":[70],"articles":[71],"that":[72],"published":[74],"each":[75,173,182],"month":[76],"a":[78,89,125,178,196,215],"daunting":[79],"task.":[80],"Accordingly,":[81],"community":[85],"would":[86],"benefit":[87],"from":[88,111,163],"resource":[90,218],"cataloguing":[91],"literature.":[96,190],"We":[97],"have":[98,115,123],"applied":[99],"computational":[100],"text-mining":[101],"techniques":[102],"parse":[104],"and":[105,108,122,181],"map":[106],"mutagenesis":[107],"polymorphism":[109],"information":[110,121,171],"enriched":[116],"with":[119],"ancillary":[120],"developed":[124],"public,":[126],"web-based":[127],"interface":[128],"through":[129],"which":[130],"can":[132],"be":[133],"intuitively":[134],"explored:":[135],"browser.":[139],"current":[141],"release":[142],"browser":[147,213,226],"describes":[148],"7,608":[152],"unique":[153],"at":[155],"2,520":[156],"sites":[157],"proteome,":[161],"resulting":[162],"analysis":[165],"120,899":[167],"papers.":[168],"protein":[174],"organised":[176],"residue-centric":[179],"manner":[180],"residue":[183],"linked":[185],"relevant":[188],"experimental":[189],"importance":[192],"as":[195],"global":[197],"health":[198],"burden":[199],"advocates":[200],"extensive":[201],"maximise":[204],"efficiency":[206],"research.":[209],"provides":[214],"valuable":[216],"community.":[222],"at:":[229],"http://hivmut.org.":[230]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
