{"id":"https://openalex.org/W2148037929","doi":"https://doi.org/10.1371/journal.pcbi.1003229","title":"Tunable Stochastic Pulsing in the Escherichia coli Multiple Antibiotic Resistance Network from Interlinked Positive and Negative Feedback Loops","display_name":"Tunable Stochastic Pulsing in the Escherichia coli Multiple Antibiotic Resistance Network from Interlinked Positive and Negative Feedback Loops","publication_year":2013,"publication_date":"2013-09-26","ids":{"openalex":"https://openalex.org/W2148037929","doi":"https://doi.org/10.1371/journal.pcbi.1003229","mag":"2148037929","pmid":"https://pubmed.ncbi.nlm.nih.gov/24086119"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1003229","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1003229","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1003229&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1003229&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045451254","display_name":"Javier Garc\u00eda-Bernardo","orcid":"https://orcid.org/0000-0002-6119-1790"},"institutions":[{"id":"https://openalex.org/I111236770","display_name":"University of Vermont","ror":"https://ror.org/0155zta11","country_code":"US","type":"education","lineage":["https://openalex.org/I111236770"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Javier Garcia-Bernardo","raw_affiliation_strings":["School of Engineering, University of Vermont, Burlington, Vermont, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, University of Vermont, Burlington, Vermont, United States of America","institution_ids":["https://openalex.org/I111236770"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062640971","display_name":"Mary J. Dunlop","orcid":"https://orcid.org/0000-0002-9261-8216"},"institutions":[{"id":"https://openalex.org/I111236770","display_name":"University of Vermont","ror":"https://ror.org/0155zta11","country_code":"US","type":"education","lineage":["https://openalex.org/I111236770"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Mary J. Dunlop","raw_affiliation_strings":["School of Engineering, University of Vermont, Burlington, Vermont, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, University of Vermont, Burlington, Vermont, United States of America","institution_ids":["https://openalex.org/I111236770"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5062640971"],"corresponding_institution_ids":["https://openalex.org/I111236770"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":2.3933,"has_fulltext":true,"cited_by_count":46,"citation_normalized_percentile":{"value":0.89133298,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"9","issue":"9","first_page":"e1003229","last_page":"e1003229"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/negative-feedback","display_name":"Negative feedback","score":0.8125238418579102},{"id":"https://openalex.org/keywords/positive-feedback","display_name":"Positive feedback","score":0.7971030473709106},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.6149699687957764},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.5160498023033142},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.5134352445602417},{"id":"https://openalex.org/keywords/feedback-loop","display_name":"Feedback loop","score":0.49513235688209534},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.4948729872703552},{"id":"https://openalex.org/keywords/stochastic-modelling","display_name":"Stochastic modelling","score":0.4815273880958557},{"id":"https://openalex.org/keywords/stochastic-process","display_name":"Stochastic process","score":0.4737466275691986},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.41597577929496765},{"id":"https://openalex.org/keywords/control-theory","display_name":"Control theory (sociology)","score":0.408771276473999},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3947267234325409},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.39008867740631104},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.36678773164749146},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.3427088260650635},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.25698769092559814},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2277422845363617},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.19357085227966309},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.19132044911384583},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.1471894383430481},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11241960525512695}],"concepts":[{"id":"https://openalex.org/C93586867","wikidata":"https://www.wikidata.org/wiki/Q62527","display_name":"Negative feedback","level":3,"score":0.8125238418579102},{"id":"https://openalex.org/C48207687","wikidata":"https://www.wikidata.org/wiki/Q918004","display_name":"Positive feedback","level":2,"score":0.7971030473709106},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.6149699687957764},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.5160498023033142},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.5134352445602417},{"id":"https://openalex.org/C186886427","wikidata":"https://www.wikidata.org/wiki/Q5441213","display_name":"Feedback loop","level":2,"score":0.49513235688209534},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.4948729872703552},{"id":"https://openalex.org/C127491075","wikidata":"https://www.wikidata.org/wiki/Q7617825","display_name":"Stochastic modelling","level":2,"score":0.4815273880958557},{"id":"https://openalex.org/C8272713","wikidata":"https://www.wikidata.org/wiki/Q176737","display_name":"Stochastic process","level":2,"score":0.4737466275691986},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.41597577929496765},{"id":"https://openalex.org/C47446073","wikidata":"https://www.wikidata.org/wiki/Q5165890","display_name":"Control theory (sociology)","level":3,"score":0.408771276473999},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3947267234325409},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.39008867740631104},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.36678773164749146},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.3427088260650635},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.25698769092559814},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2277422845363617},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.19357085227966309},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.19132044911384583},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.1471894383430481},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11241960525512695},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C2775924081","wikidata":"https://www.wikidata.org/wiki/Q55608371","display_name":"Control (management)","level":2,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C165801399","wikidata":"https://www.wikidata.org/wiki/Q25428","display_name":"Voltage","level":2,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D005246","descriptor_name":"Feedback","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005246","descriptor_name":"Feedback","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005246","descriptor_name":"Feedback","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D024901","descriptor_name":"Drug Resistance, Multiple, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D024901","descriptor_name":"Drug Resistance, Multiple, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D024901","descriptor_name":"Drug Resistance, Multiple, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1003229","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1003229","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1003229&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},{"id":"pmid:24086119","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24086119","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:3a72ec832d004864a0f89be1f717a2e5","is_oa":true,"landing_page_url":"https://doaj.org/article/3a72ec832d004864a0f89be1f717a2e5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 9, Iss 9, p e1003229 (2013)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2781327","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3784492","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:figshare.com:article/809312","is_oa":true,"landing_page_url":"https://figshare.com/articles/Tunable_Stochastic_Pulsing_in_the_Escherichia_coli_Multiple_Antibiotic_Resistance_Network_from_Interlinked_Positive_and_Negative_Feedback_Loops/809312","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pubmedcentral.nih.gov:3784492","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3784492","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1003229","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1003229","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1003229&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.6600000262260437,"display_name":"Life in Land"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320312462","display_name":"University of Vermont","ror":"https://ror.org/0155zta11"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2148037929.pdf","grobid_xml":"https://content.openalex.org/works/W2148037929.grobid-xml"},"referenced_works_count":67,"referenced_works":["https://openalex.org/W1498305978","https://openalex.org/W1513616826","https://openalex.org/W1540179470","https://openalex.org/W1572779399","https://openalex.org/W1769572426","https://openalex.org/W1950708157","https://openalex.org/W1967668980","https://openalex.org/W1970786682","https://openalex.org/W1971154088","https://openalex.org/W1978182054","https://openalex.org/W1981825588","https://openalex.org/W1982204394","https://openalex.org/W1985161570","https://openalex.org/W1988704611","https://openalex.org/W1992644222","https://openalex.org/W1993849783","https://openalex.org/W1998418064","https://openalex.org/W2002633382","https://openalex.org/W2007328617","https://openalex.org/W2009646503","https://openalex.org/W2017223198","https://openalex.org/W2020369705","https://openalex.org/W2022007240","https://openalex.org/W2023543015","https://openalex.org/W2034873282","https://openalex.org/W2038168727","https://openalex.org/W2038819846","https://openalex.org/W2043487490","https://openalex.org/W2044917835","https://openalex.org/W2046417832","https://openalex.org/W2047908973","https://openalex.org/W2049415064","https://openalex.org/W2051497876","https://openalex.org/W2055571822","https://openalex.org/W2056406543","https://openalex.org/W2058952776","https://openalex.org/W2063346607","https://openalex.org/W2067588061","https://openalex.org/W2069250280","https://openalex.org/W2091198609","https://openalex.org/W2092724797","https://openalex.org/W2096015757","https://openalex.org/W2109214045","https://openalex.org/W2113556104","https://openalex.org/W2114228460","https://openalex.org/W2115606218","https://openalex.org/W2121747816","https://openalex.org/W2123707462","https://openalex.org/W2127013070","https://openalex.org/W2127878017","https://openalex.org/W2132828256","https://openalex.org/W2134409022","https://openalex.org/W2134548479","https://openalex.org/W2135087037","https://openalex.org/W2135106844","https://openalex.org/W2136410702","https://openalex.org/W2141564052","https://openalex.org/W2149820656","https://openalex.org/W2149884465","https://openalex.org/W2154881669","https://openalex.org/W2155418451","https://openalex.org/W2163999241","https://openalex.org/W2166692079","https://openalex.org/W2407659607","https://openalex.org/W2499088278","https://openalex.org/W4213353716","https://openalex.org/W6817966389"],"related_works":["https://openalex.org/W2771707358","https://openalex.org/W2773320882","https://openalex.org/W2899244556","https://openalex.org/W2106469366","https://openalex.org/W1970980747","https://openalex.org/W2038819846","https://openalex.org/W1603824164","https://openalex.org/W2051497876","https://openalex.org/W1971938644","https://openalex.org/W1976535961"],"abstract_inverted_index":{"Cells":[0,45],"live":[1],"in":[2,16,22,57,104,126,160,223,238,255],"uncertain,":[3],"dynamic":[4],"environments":[5],"and":[6,12,95,118,178],"have":[7,39],"many":[8],"mechanisms":[9,174],"for":[10,236,249],"sensing":[11],"responding":[13],"to":[14,28,147,169,247],"changes":[15],"their":[17],"surroundings.":[18],"However,":[19],"sudden":[20],"fluctuations":[21],"the":[23,58,87,105,128,131,149,155,170,206,224,256],"environment":[24],"can":[25,46,99,190,228],"be":[26,191],"catastrophic":[27],"a":[29,40,52,61,73,83,113,137,161,231,250,259],"population":[30],"if":[31],"it":[32,98],"relies":[33],"solely":[34],"on":[35],"sensory":[36],"responses,":[37],"which":[38],"delay":[41],"associated":[42],"with":[43],"them.":[44],"reconcile":[47],"these":[48],"effects":[49,208],"by":[50,193],"using":[51],"tunable":[53,101,246],"stochastic":[54,84,102,132,188],"response,":[55],"where":[56],"absence":[59],"of":[60,86,92,115,130,166,209,226,258],"stressor":[62],"they":[63],"create":[64],"phenotypic":[65],"diversity":[66],"within":[67],"an":[68,123,212],"isogenic":[69],"population,":[70],"but":[71],"use":[72],"deterministic":[74,253],"response":[75,139,254],"when":[76,211],"stressors":[77],"are":[78,175,203],"sensed.":[79],"Here,":[80],"we":[81,110],"develop":[82],"model":[85],"multiple":[88],"antibiotic":[89],"resistance":[90,173],"network":[91,158],"Escherichia":[93],"coli":[94],"show":[96,111,153,220],"that":[97,112,140,154,164,197,221],"produce":[100],"pulses":[103],"activator":[106],"MarA.":[107],"In":[108],"particular,":[109],"combination":[114],"interlinked":[116],"positive":[117,144],"negative":[119],"feedback":[120,135,145],"loops":[121],"plays":[122],"important":[124],"role":[125],"setting":[127],"dynamics":[129],"pulses.":[133],"Negative":[134],"produces":[136],"pulsatile":[138],"is":[141,159,165,185,199,216,245],"tunable,":[142],"while":[143],"serves":[146],"amplify":[148],"effect.":[150],"Our":[151],"simulations":[152],"uninduced":[156],"native":[157],"parameter":[162],"regime":[163],"low":[167],"cost":[168],"cell":[171],"(taxing":[172],"expressed":[176],"infrequently)":[177],"also":[179],"elevated":[180],"noise":[181,210],"strength":[182],"(phenotypic":[183],"variability":[184,198,222],"high).":[186],"The":[187],"pulsing":[189],"tuned":[192],"MarA":[194,214,227],"induction":[195],"such":[196],"decreased":[200],"once":[201],"stresses":[202],"sensed,":[204],"avoiding":[205],"detrimental":[207],"optimal":[213],"concentration":[215],"needed.":[217],"We":[218],"further":[219],"expression":[225],"act":[229],"as":[230],"bet":[232],"hedging":[233],"mechanism,":[234],"allowing":[235],"survival":[237],"time-varying":[239],"stress":[240],"environments,":[241],"however":[242],"this":[243],"effect":[244],"allow":[248],"fully":[251],"induced,":[252],"presence":[257],"stressor.":[260]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
