{"id":"https://openalex.org/W1964303520","doi":"https://doi.org/10.1371/journal.pcbi.1002632","title":"An Online Bioinformatics Curriculum","display_name":"An Online Bioinformatics Curriculum","publication_year":2012,"publication_date":"2012-09-13","ids":{"openalex":"https://openalex.org/W1964303520","doi":"https://doi.org/10.1371/journal.pcbi.1002632","mag":"1964303520","pmid":"https://pubmed.ncbi.nlm.nih.gov/23028269"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1002632","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1002632","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002632&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002632&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010900550","display_name":"David B. Searls","orcid":"https://orcid.org/0000-0001-7840-8274"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"David B. Searls","raw_affiliation_strings":["david.b.searls@gmail.com","Independent Consultant, Philadelphia, Pennsylvania, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"david.b.searls@gmail.com","institution_ids":[]},{"raw_affiliation_string":"Independent Consultant, Philadelphia, Pennsylvania, United States of America","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5010900550"],"corresponding_institution_ids":[],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":1.1048,"has_fulltext":true,"cited_by_count":28,"citation_normalized_percentile":{"value":0.74799121,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"8","issue":"9","first_page":"e1002632","last_page":"e1002632"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13280","display_name":"Biomedical and Engineering Education","score":0.9514999985694885,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/curriculum","display_name":"Curriculum","score":0.7138177156448364},{"id":"https://openalex.org/keywords/presentation","display_name":"Presentation (obstetrics)","score":0.6237077116966248},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6104078888893127},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.5662178993225098},{"id":"https://openalex.org/keywords/strengths-and-weaknesses","display_name":"Strengths and weaknesses","score":0.5027570724487305},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.501201868057251},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.49732473492622375},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4839244484901428},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.44794631004333496},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.41235268115997314},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24423274397850037},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.16567480564117432},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15948054194450378},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1512155830860138}],"concepts":[{"id":"https://openalex.org/C47177190","wikidata":"https://www.wikidata.org/wiki/Q207137","display_name":"Curriculum","level":2,"score":0.7138177156448364},{"id":"https://openalex.org/C2777601897","wikidata":"https://www.wikidata.org/wiki/Q3409113","display_name":"Presentation (obstetrics)","level":2,"score":0.6237077116966248},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6104078888893127},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.5662178993225098},{"id":"https://openalex.org/C63882131","wikidata":"https://www.wikidata.org/wiki/Q17122954","display_name":"Strengths and weaknesses","level":2,"score":0.5027570724487305},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.501201868057251},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.49732473492622375},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4839244484901428},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.44794631004333496},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.41235268115997314},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24423274397850037},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.16567480564117432},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15948054194450378},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1512155830860138},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0},{"id":"https://openalex.org/C77805123","wikidata":"https://www.wikidata.org/wiki/Q161272","display_name":"Social psychology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003194","descriptor_name":"Computer-Assisted Instruction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003194","descriptor_name":"Computer-Assisted Instruction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003194","descriptor_name":"Computer-Assisted Instruction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003479","descriptor_name":"Curriculum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003479","descriptor_name":"Curriculum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003479","descriptor_name":"Curriculum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009862","descriptor_name":"Online Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009862","descriptor_name":"Online Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009862","descriptor_name":"Online Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pcbi.1002632","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1002632","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002632&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},{"id":"pmid:23028269","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23028269","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:europepmc.org:2452177","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3441465","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:RePEc:plo:pcbi00:1002632","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1002632","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:cdb0ee8d523b4d69be8d8fa05c1bf4a9","is_oa":true,"landing_page_url":"https://doaj.org/article/cdb0ee8d523b4d69be8d8fa05c1bf4a9","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 8, Iss 9, p e1002632 (2012)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1002632","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1002632","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002632&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.4300000071525574,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1964303520.pdf","grobid_xml":"https://content.openalex.org/works/W1964303520.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W19838944","https://openalex.org/W121658990","https://openalex.org/W150699103","https://openalex.org/W285471286","https://openalex.org/W585964221","https://openalex.org/W638800637","https://openalex.org/W1464106189","https://openalex.org/W1483736078","https://openalex.org/W1504510381","https://openalex.org/W1516441385","https://openalex.org/W1519038128","https://openalex.org/W1521626219","https://openalex.org/W1543636183","https://openalex.org/W1554944419","https://openalex.org/W1554960070","https://openalex.org/W1560890255","https://openalex.org/W1581366099","https://openalex.org/W1607198972","https://openalex.org/W1990061958","https://openalex.org/W1994584977","https://openalex.org/W2025875245","https://openalex.org/W2054688981","https://openalex.org/W2089674328","https://openalex.org/W2095674846","https://openalex.org/W2099111195","https://openalex.org/W2121495423","https://openalex.org/W2122410182","https://openalex.org/W2172151447","https://openalex.org/W2296319761","https://openalex.org/W2337068785","https://openalex.org/W2337092215","https://openalex.org/W2340541605","https://openalex.org/W2496945004","https://openalex.org/W2751555667","https://openalex.org/W2753848022","https://openalex.org/W2978043705","https://openalex.org/W2982900375","https://openalex.org/W3123935820","https://openalex.org/W3140968660","https://openalex.org/W3145128584","https://openalex.org/W3202619697","https://openalex.org/W3215186461","https://openalex.org/W4230225009","https://openalex.org/W4240773390","https://openalex.org/W4246219036","https://openalex.org/W4251136000","https://openalex.org/W4298298418","https://openalex.org/W4300124000","https://openalex.org/W4301892037"],"related_works":["https://openalex.org/W4295769391","https://openalex.org/W2972220648","https://openalex.org/W4387426029","https://openalex.org/W2332667808","https://openalex.org/W4254162896","https://openalex.org/W4388792380","https://openalex.org/W1997921863","https://openalex.org/W1477999932","https://openalex.org/W4386731653","https://openalex.org/W2376001620"],"abstract_inverted_index":{"Online":[0],"learning":[1,104],"initiatives":[2],"over":[3],"the":[4,23,42,59,80],"past":[5],"decade":[6],"have":[7],"become":[8],"increasingly":[9],"comprehensive":[10,63],"in":[11,18,22,79,105],"their":[12,19],"selection":[13],"of":[14,26,29,45,82,94],"courses":[15],"and":[16,31,91,97],"sophisticated":[17],"presentation,":[20],"culminating":[21],"recent":[24],"announcement":[25],"a":[27,38,47,76,83],"number":[28],"consortium":[30],"startup":[32],"activities":[33],"that":[34],"promise":[35],"to":[36,57],"make":[37],"university":[39],"education":[40],"on":[41],"internet,":[43],"free":[44,69],"charge,":[46],"real":[48],"possibility.":[49],"At":[50],"this":[51,106],"pivotal":[52],"moment":[53],"it":[54],"is":[55],"appropriate":[56],"explore":[58],"potential":[60],"for":[61,101],"obtaining":[62],"bioinformatics":[64,77],"training":[65],"with":[66,88],"currently":[67],"existing":[68],"video":[70],"resources.":[71],"This":[72],"article":[73],"presents":[74],"such":[75],"curriculum":[78],"form":[81],"virtual":[84],"course":[85],"catalog,":[86],"together":[87],"editorial":[89],"commentary,":[90],"an":[92],"assessment":[93],"strengths,":[95],"weaknesses,":[96],"likely":[98],"future":[99],"directions":[100],"open":[102],"online":[103],"field.":[107]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
