{"id":"https://openalex.org/W2120539430","doi":"https://doi.org/10.1371/journal.pcbi.1002141","title":"Using Electronic Patient Records to Discover Disease Correlations and Stratify Patient Cohorts","display_name":"Using Electronic Patient Records to Discover Disease Correlations and Stratify Patient Cohorts","publication_year":2011,"publication_date":"2011-08-25","ids":{"openalex":"https://openalex.org/W2120539430","doi":"https://doi.org/10.1371/journal.pcbi.1002141","mag":"2120539430","pmid":"https://pubmed.ncbi.nlm.nih.gov/21901084"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1002141","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1002141","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002141&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002141&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109223946","display_name":"Francisco S. Roque","orcid":null},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Francisco S. Roque","raw_affiliation_strings":["Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Lyngby, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Lyngby, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017072444","display_name":"Peter Bj\u00f8dstrup Jensen","orcid":"https://orcid.org/0000-0001-5435-9092"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Peter B. Jensen","raw_affiliation_strings":["NNF Center for Protein Research, University of Copenhagen, Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"NNF Center for Protein Research, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059875356","display_name":"Henriette Schmock","orcid":"https://orcid.org/0000-0003-3566-4942"},"institutions":[{"id":"https://openalex.org/I2802567020","display_name":"Copenhagen University Hospital","ror":"https://ror.org/05bpbnx46","country_code":"DK","type":"healthcare","lineage":["https://openalex.org/I2802567020"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Henriette Schmock","raw_affiliation_strings":["Institute of Biological Psychiatry, Mental Health Center Sct. Hans, Copenhagen University Hospital, Roskilde, Denmark"],"affiliations":[{"raw_affiliation_string":"Institute of Biological Psychiatry, Mental Health Center Sct. Hans, Copenhagen University Hospital, Roskilde, Denmark","institution_ids":["https://openalex.org/I2802567020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089609097","display_name":"Marlene Dalgaard","orcid":"https://orcid.org/0000-0002-4036-6408"},"institutions":[{"id":"https://openalex.org/I2802709434","display_name":"Rigshospitalet","ror":"https://ror.org/03mchdq19","country_code":"DK","type":"healthcare","lineage":["https://openalex.org/I2802567020","https://openalex.org/I2802709434","https://openalex.org/I4210145385"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Marlene Dalgaard","raw_affiliation_strings":["Department of Growth and Reproduction GR, Rigshospitalet, Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Growth and Reproduction GR, Rigshospitalet, Copenhagen, Denmark","institution_ids":["https://openalex.org/I2802709434"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003717199","display_name":"Massimo Andreatta","orcid":"https://orcid.org/0000-0002-8036-2647"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Massimo Andreatta","raw_affiliation_strings":["Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Lyngby, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Lyngby, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007978629","display_name":"Thomas Folkmann Hansen","orcid":"https://orcid.org/0000-0001-6703-7762"},"institutions":[{"id":"https://openalex.org/I2802567020","display_name":"Copenhagen University Hospital","ror":"https://ror.org/05bpbnx46","country_code":"DK","type":"healthcare","lineage":["https://openalex.org/I2802567020"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Thomas Hansen","raw_affiliation_strings":["Institute of Biological Psychiatry, Mental Health Center Sct. Hans, Copenhagen University Hospital, Roskilde, Denmark"],"affiliations":[{"raw_affiliation_string":"Institute of Biological Psychiatry, Mental Health Center Sct. Hans, Copenhagen University Hospital, Roskilde, Denmark","institution_ids":["https://openalex.org/I2802567020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064356274","display_name":"Karen S\u00f8eby","orcid":null},"institutions":[{"id":"https://openalex.org/I2802567020","display_name":"Copenhagen University Hospital","ror":"https://ror.org/05bpbnx46","country_code":"DK","type":"healthcare","lineage":["https://openalex.org/I2802567020"]},{"id":"https://openalex.org/I2801942218","display_name":"Hvidovre Hospital","ror":"https://ror.org/00edrn755","country_code":"DK","type":"healthcare","lineage":["https://openalex.org/I2801942218","https://openalex.org/I2802567020"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Karen S\u00f8eby","raw_affiliation_strings":["Department of Clinical Biochemistry, Hvidovre Hospital, Copenhagen University Hospital, Hvidovre, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Clinical Biochemistry, Hvidovre Hospital, Copenhagen University Hospital, Hvidovre, Denmark","institution_ids":["https://openalex.org/I2801942218","https://openalex.org/I2802567020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066943001","display_name":"S\u00f8ren Bredkj\u00e6r","orcid":null},"institutions":[{"id":"https://openalex.org/I2802567020","display_name":"Copenhagen University Hospital","ror":"https://ror.org/05bpbnx46","country_code":"DK","type":"healthcare","lineage":["https://openalex.org/I2802567020"]},{"id":"https://openalex.org/I4210131195","display_name":"Ringsted Sygehus","ror":"https://ror.org/03gn6hs29","country_code":"DK","type":"healthcare","lineage":["https://openalex.org/I4210131195"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"S\u00f8ren Bredkj\u00e6r","raw_affiliation_strings":["Institute of Biological Psychiatry, Mental Health Center Sct. Hans, Copenhagen University Hospital, Roskilde, Denmark","Psychiatry Region Sealand, Ringsted, Denmark"],"affiliations":[{"raw_affiliation_string":"Institute of Biological Psychiatry, Mental Health Center Sct. Hans, Copenhagen University Hospital, Roskilde, Denmark","institution_ids":["https://openalex.org/I2802567020"]},{"raw_affiliation_string":"Psychiatry Region Sealand, Ringsted, Denmark","institution_ids":["https://openalex.org/I4210131195"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045917807","display_name":"Anders Juul","orcid":"https://orcid.org/0000-0002-0534-4350"},"institutions":[{"id":"https://openalex.org/I2802709434","display_name":"Rigshospitalet","ror":"https://ror.org/03mchdq19","country_code":"DK","type":"healthcare","lineage":["https://openalex.org/I2802567020","https://openalex.org/I2802709434","https://openalex.org/I4210145385"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Anders Juul","raw_affiliation_strings":["Department of Growth and Reproduction GR, Rigshospitalet, Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Growth and Reproduction GR, Rigshospitalet, Copenhagen, Denmark","institution_ids":["https://openalex.org/I2802709434"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051228367","display_name":"Thomas Werge","orcid":"https://orcid.org/0000-0003-1829-0766"},"institutions":[{"id":"https://openalex.org/I2802567020","display_name":"Copenhagen University Hospital","ror":"https://ror.org/05bpbnx46","country_code":"DK","type":"healthcare","lineage":["https://openalex.org/I2802567020"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Thomas Werge","raw_affiliation_strings":["Institute of Biological Psychiatry, Mental Health Center Sct. Hans, Copenhagen University Hospital, Roskilde, Denmark"],"affiliations":[{"raw_affiliation_string":"Institute of Biological Psychiatry, Mental Health Center Sct. Hans, Copenhagen University Hospital, Roskilde, Denmark","institution_ids":["https://openalex.org/I2802567020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005772961","display_name":"Lars Juhl Jensen","orcid":"https://orcid.org/0000-0001-7885-715X"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Lars J. Jensen","raw_affiliation_strings":["NNF Center for Protein Research, University of Copenhagen, Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"NNF Center for Protein Research, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011862057","display_name":"S\u00f8ren Brunak","orcid":"https://orcid.org/0000-0003-0316-5866"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]},{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"S\u00f8ren Brunak","raw_affiliation_strings":["Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Lyngby, Denmark","NNF Center for Protein Research, University of Copenhagen, Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Lyngby, Denmark","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"NNF Center for Protein Research, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5011862057"],"corresponding_institution_ids":["https://openalex.org/I124055696","https://openalex.org/I96673099"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":11.0729,"has_fulltext":true,"cited_by_count":285,"citation_normalized_percentile":{"value":0.99076437,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"7","issue":"8","first_page":"e1002141","last_page":"e1002141"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9850000143051147,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.975600004196167,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/medical-record","display_name":"Medical record","score":0.6403490304946899},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5416891574859619},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5130878686904907},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5116141438484192},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.506241500377655},{"id":"https://openalex.org/keywords/danish","display_name":"Danish","score":0.48689547181129456},{"id":"https://openalex.org/keywords/cohort","display_name":"Cohort","score":0.4550545811653137},{"id":"https://openalex.org/keywords/health-records","display_name":"Health records","score":0.41379982233047485},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.4035012125968933},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3722477853298187},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.36884185671806335},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18857687711715698},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.1571582853794098},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.10892629623413086},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.08970680832862854},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.0854264497756958}],"concepts":[{"id":"https://openalex.org/C195910791","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Medical record","level":2,"score":0.6403490304946899},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5416891574859619},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5130878686904907},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5116141438484192},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.506241500377655},{"id":"https://openalex.org/C164622146","wikidata":"https://www.wikidata.org/wiki/Q9035","display_name":"Danish","level":2,"score":0.48689547181129456},{"id":"https://openalex.org/C72563966","wikidata":"https://www.wikidata.org/wiki/Q1303415","display_name":"Cohort","level":2,"score":0.4550545811653137},{"id":"https://openalex.org/C3019952477","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Health records","level":3,"score":0.41379982233047485},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4035012125968933},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3722477853298187},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.36884185671806335},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18857687711715698},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.1571582853794098},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.10892629623413086},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.08970680832862854},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.0854264497756958},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015331","descriptor_name":"Cohort Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015331","descriptor_name":"Cohort Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015331","descriptor_name":"Cohort Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015897","descriptor_name":"Comorbidity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015897","descriptor_name":"Comorbidity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015897","descriptor_name":"Comorbidity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":9,"locations":[{"id":"doi:10.1371/journal.pcbi.1002141","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1002141","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002141&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},{"id":"pmid:21901084","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21901084","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.803.4942","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.803.4942","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/a0/39/pcbi.1002141.PMC3161904.pdf","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:99ba46806dcc46edb876c08be452b359","is_oa":true,"landing_page_url":"https://doaj.org/article/99ba46806dcc46edb876c08be452b359","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 7, Iss 8, p e1002141 (2011)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2174937","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3161904","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:figshare.com:article/133941","is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Using_Electronic_Patient_Records_to_Discover_Disease_Correlations_and_Stratify_Patient_Cohorts/133941","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/4b0328de-49b1-4b85-a63a-e97bb274506e","is_oa":false,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/4b0328de-49b1-4b85-a63a-e97bb274506e","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Roque , F S , Jensen , P B , Schmock , H , Dalgaard , M , Andreatta , M , Hansen , T , S\u00f8eby , K , Bredkj\u00e6r , S , Juul , A , Werge , T , Jensen , L J & Brunak , S 2011 , ' Using electronic patient records to discover disease correlations and stratify patient cohorts ' , P L o S Computational Biology , vol. 7 , no. 8 , pp. e1002141 . https://doi.org/10.1371/journal.pcbi.1002141","raw_type":"article"},{"id":"pmh:oai:pure.atira.dk:publications/4b0328de-49b1-4b85-a63a-e97bb274506e","is_oa":false,"landing_page_url":"https://curis.ku.dk/portal/da/publications/using-electronic-patient-records-to-discover-disease-correlations-and-stratify-patient-cohorts(4b0328de-49b1-4b85-a63a-e97bb274506e).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Roque , F S , Jensen , P B , Schmock , H , Dalgaard , M , Andreatta , M , Hansen , T , S\u00f8eby , K , Bredkj\u00e6r , S , Juul , A , Werge , T , Jensen , L J & Brunak , S 2011 , ' Using electronic patient records to discover disease correlations and stratify patient cohorts ' , P L o S Computational Biology , vol. 7 , no. 8 , pp. e1002141 . https://doi.org/10.1371/journal.pcbi.1002141","raw_type":"article"},{"id":"pmh:oai:pure.atira.dk:publications/a3a518a4-6549-43ca-b132-b2e73c14b64c","is_oa":true,"landing_page_url":"https://orbit.dtu.dk/en/publications/a3a518a4-6549-43ca-b132-b2e73c14b64c","pdf_url":null,"source":{"id":"https://openalex.org/S4306400705","display_name":"Technical University of Denmark, DTU Orbit (Technical University of Denmark, DTU)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I96673099","host_organization_name":"Technical University of Denmark","host_organization_lineage":["https://openalex.org/I96673099"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Roque , F S , Jensen , P B , Schmock , H , Dalgaard , M , Andreatta , M , Hansen , T , S\u00f8eby , K , Bredkjaer , S , Juul , A , Werge , T , Jensen , L J &amp; Brunak , S 2011 , ' Using Electronic Patient Records to Discover Disease Correlations and Stratify Patient Cohorts ' , P L o S Computational Biology (Online) , vol. 7 , no. 8 . https://doi.org/10.1371/journal.pcbi.1002141","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1002141","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1002141","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002141&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322436","display_name":"Novo Nordisk","ror":"https://ror.org/0435rc536"},{"id":"https://openalex.org/F4320325957","display_name":"Novo Nordisk Fonden","ror":"https://ror.org/04txyc737"},{"id":"https://openalex.org/F4320335354","display_name":"Strategic Research Council","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2120539430.pdf","grobid_xml":"https://content.openalex.org/works/W2120539430.grobid-xml"},"referenced_works_count":79,"referenced_works":["https://openalex.org/W58804258","https://openalex.org/W78496535","https://openalex.org/W182767159","https://openalex.org/W1516037026","https://openalex.org/W1532325895","https://openalex.org/W1540453403","https://openalex.org/W1542760790","https://openalex.org/W1550258693","https://openalex.org/W1602694398","https://openalex.org/W1686401129","https://openalex.org/W1722431364","https://openalex.org/W1871067837","https://openalex.org/W1876097930","https://openalex.org/W1959452164","https://openalex.org/W1962919783","https://openalex.org/W1963918827","https://openalex.org/W1970967239","https://openalex.org/W1973754941","https://openalex.org/W1983126696","https://openalex.org/W1987195930","https://openalex.org/W1988967457","https://openalex.org/W1994306321","https://openalex.org/W1994803330","https://openalex.org/W2011833769","https://openalex.org/W2020860921","https://openalex.org/W2028828767","https://openalex.org/W2035313969","https://openalex.org/W2038650356","https://openalex.org/W2041223954","https://openalex.org/W2043909051","https://openalex.org/W2046831513","https://openalex.org/W2049521532","https://openalex.org/W2051743300","https://openalex.org/W2052568010","https://openalex.org/W2056585933","https://openalex.org/W2056798858","https://openalex.org/W2058924226","https://openalex.org/W2059331879","https://openalex.org/W2070533721","https://openalex.org/W2070654052","https://openalex.org/W2071606763","https://openalex.org/W2083045667","https://openalex.org/W2086294181","https://openalex.org/W2093551211","https://openalex.org/W2094627160","https://openalex.org/W2100060114","https://openalex.org/W2103397879","https://openalex.org/W2103579660","https://openalex.org/W2104261859","https://openalex.org/W2107021160","https://openalex.org/W2109206523","https://openalex.org/W2110065044","https://openalex.org/W2110094249","https://openalex.org/W2111352465","https://openalex.org/W2113105800","https://openalex.org/W2114388055","https://openalex.org/W2114668172","https://openalex.org/W2119412782","https://openalex.org/W2125260686","https://openalex.org/W2129299248","https://openalex.org/W2137200212","https://openalex.org/W2139649358","https://openalex.org/W2139865360","https://openalex.org/W2146089916","https://openalex.org/W2147842136","https://openalex.org/W2148415940","https://openalex.org/W2151524994","https://openalex.org/W2152415104","https://openalex.org/W2171766700","https://openalex.org/W2245363045","https://openalex.org/W2422900177","https://openalex.org/W2790034851","https://openalex.org/W2791938577","https://openalex.org/W3025884923","https://openalex.org/W4231934124","https://openalex.org/W4237854050","https://openalex.org/W6631834165","https://openalex.org/W6632519949","https://openalex.org/W6680816128"],"related_works":["https://openalex.org/W2800223847","https://openalex.org/W4408752871","https://openalex.org/W3023624299","https://openalex.org/W2085994570","https://openalex.org/W2554558516","https://openalex.org/W2355354922","https://openalex.org/W2527724968","https://openalex.org/W2356296688","https://openalex.org/W2413325029","https://openalex.org/W2739554337"],"abstract_inverted_index":{"Electronic":[0],"patient":[1,68],"records":[2,30,47,101],"remain":[3],"a":[4,19,32,77,95,103],"rather":[5],"unexplored,":[6],"but":[7],"potentially":[8],"rich":[9],"data":[10],"source":[11],"for":[12,22,65],"discovering":[13],"correlations":[14],"between":[15],"diseases.":[16],"We":[17],"describe":[18],"general":[20],"approach":[21,75],"gathering":[23],"phenotypic":[24],"descriptions":[25],"of":[26,84,111],"patients":[27],"from":[28,42,102],"medical":[29],"in":[31,45,57,90],"systematic":[33],"and":[34,62,70,87],"non-cohort":[35],"dependent":[36],"manner.":[37],"By":[38],"extracting":[39],"phenotype":[40],"information":[41,55],"the":[43,54,58,81,109],"free-text":[44],"such":[46],"we":[48,51,98],"demonstrate":[49],"that":[50],"can":[52,116],"extend":[53],"contained":[56],"structured":[59],"record":[60],"data,":[61],"use":[63,96],"it":[64],"producing":[66],"fine-grained":[67],"stratification":[69],"disease":[71,112],"co-occurrence":[72],"statistics.":[73],"The":[74],"uses":[76],"dictionary":[78],"based":[79],"on":[80],"International":[82],"Classification":[83],"Disease":[85],"ontology":[86],"is":[88],"therefore":[89],"principle":[91],"language":[92],"independent.":[93],"As":[94],"case":[97],"show":[99],"how":[100],"Danish":[104],"psychiatric":[105],"hospital":[106],"lead":[107],"to":[108,119],"identification":[110],"correlations,":[113],"which":[114],"subsequently":[115],"be":[117],"mapped":[118],"systems":[120],"biology":[121],"frameworks.":[122]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":23},{"year":2020,"cited_by_count":20},{"year":2019,"cited_by_count":25},{"year":2018,"cited_by_count":25},{"year":2017,"cited_by_count":24},{"year":2016,"cited_by_count":31},{"year":2015,"cited_by_count":26},{"year":2014,"cited_by_count":37},{"year":2013,"cited_by_count":26},{"year":2012,"cited_by_count":16}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
