{"id":"https://openalex.org/W1999332840","doi":"https://doi.org/10.1371/journal.pcbi.1002003","title":"A Review of 2010 for PLoS Computational Biology","display_name":"A Review of 2010 for PLoS Computational Biology","publication_year":2011,"publication_date":"2011-01-27","ids":{"openalex":"https://openalex.org/W1999332840","doi":"https://doi.org/10.1371/journal.pcbi.1002003","mag":"1999332840","pmid":"https://pubmed.ncbi.nlm.nih.gov/21298077"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1002003","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1002003","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002003&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002003&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089089938","display_name":"Rosemary Dickin","orcid":null},"institutions":[{"id":"https://openalex.org/I108652713","display_name":"Public Library of Science","ror":"https://ror.org/008zgvp64","country_code":"US","type":"archive","lineage":["https://openalex.org/I108652713"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rosemary Dickin","raw_affiliation_strings":["Public Library of Science, Cambridge, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Public Library of Science, Cambridge, United Kingdom","institution_ids":["https://openalex.org/I108652713"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038801297","display_name":"Cecy Marden","orcid":"https://orcid.org/0000-0002-6859-3741"},"institutions":[{"id":"https://openalex.org/I108652713","display_name":"Public Library of Science","ror":"https://ror.org/008zgvp64","country_code":"US","type":"archive","lineage":["https://openalex.org/I108652713"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cecy Marden","raw_affiliation_strings":["Public Library of Science, Cambridge, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Public Library of Science, Cambridge, United Kingdom","institution_ids":["https://openalex.org/I108652713"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031370557","display_name":"Andy Collings","orcid":"https://orcid.org/0000-0001-9570-2061"},"institutions":[{"id":"https://openalex.org/I108652713","display_name":"Public Library of Science","ror":"https://ror.org/008zgvp64","country_code":"US","type":"archive","lineage":["https://openalex.org/I108652713"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew M. Collings","raw_affiliation_strings":["Public Library of Science, Cambridge, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Public Library of Science, Cambridge, United Kingdom","institution_ids":["https://openalex.org/I108652713"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025357844","display_name":"Ruth Nussinov","orcid":"https://orcid.org/0000-0002-8115-6415"},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]},{"id":"https://openalex.org/I880747138","display_name":"Science Applications International Corporation (United States)","ror":"https://ror.org/00zv91802","country_code":"US","type":"company","lineage":["https://openalex.org/I880747138"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Ruth Nussinov","raw_affiliation_strings":["National Cancer Institute, SAIC-Frederick, Maryland, United States of America","Tel Aviv University, Tel Aviv, Israel"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, SAIC-Frederick, Maryland, United States of America","institution_ids":["https://openalex.org/I880747138","https://openalex.org/I4210140884"]},{"raw_affiliation_string":"Tel Aviv University, Tel Aviv, Israel","institution_ids":["https://openalex.org/I16391192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075833022","display_name":"Philip E. Bourne","orcid":"https://orcid.org/0000-0002-7618-7292"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Philip E. Bourne","raw_affiliation_strings":["Department of Pharmacology, University of California San Diego, La Jolla, California, United States of America","Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, California, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Pharmacology, University of California San Diego, La Jolla, California, United States of America","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, California, United States of America","institution_ids":["https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5075833022"],"corresponding_institution_ids":["https://openalex.org/I36258959"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.07706012,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"7","issue":"1","first_page":"e1002003","last_page":"e1002003"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.974399983882904,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/audience-measurement","display_name":"Audience measurement","score":0.6664878726005554},{"id":"https://openalex.org/keywords/table-of-contents","display_name":"Table of contents","score":0.5333917737007141},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.5277246236801147},{"id":"https://openalex.org/keywords/citation","display_name":"Citation","score":0.47823160886764526},{"id":"https://openalex.org/keywords/impact-factor","display_name":"Impact factor","score":0.4617602527141571},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.42503225803375244},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3528992533683777},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.218824565410614},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.14109140634536743}],"concepts":[{"id":"https://openalex.org/C82307848","wikidata":"https://www.wikidata.org/wiki/Q847520","display_name":"Audience measurement","level":2,"score":0.6664878726005554},{"id":"https://openalex.org/C68476402","wikidata":"https://www.wikidata.org/wiki/Q1456936","display_name":"Table of contents","level":2,"score":0.5333917737007141},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.5277246236801147},{"id":"https://openalex.org/C2778805511","wikidata":"https://www.wikidata.org/wiki/Q1713","display_name":"Citation","level":2,"score":0.47823160886764526},{"id":"https://openalex.org/C2779455604","wikidata":"https://www.wikidata.org/wiki/Q5330","display_name":"Impact factor","level":2,"score":0.4617602527141571},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.42503225803375244},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3528992533683777},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.218824565410614},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.14109140634536743},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D011643","descriptor_name":"Publishing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011643","descriptor_name":"Publishing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011643","descriptor_name":"Publishing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1002003","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1002003","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002003&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},{"id":"pmid:21298077","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21298077","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:05081179df4b40f5ba374f2b3f03710d","is_oa":true,"landing_page_url":"https://doaj.org/article/05081179df4b40f5ba374f2b3f03710d","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 6, Iss 2 (2010)","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:a192dc3136414320acaeb6bd543854e2","is_oa":true,"landing_page_url":"https://doaj.org/article/a192dc3136414320acaeb6bd543854e2","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 7, Iss 1, p e1002003 (2011)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/139220","is_oa":true,"landing_page_url":"https://figshare.com/articles/A_Review_of_2010_for_PLoS_Computational_Biology_/139220","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pubmedcentral.nih.gov:3029231","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3029231","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1002003","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1002003","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1002003&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1999332840.pdf","grobid_xml":"https://content.openalex.org/works/W1999332840.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W1975981804","https://openalex.org/W1984053739","https://openalex.org/W1999290017","https://openalex.org/W2010124835","https://openalex.org/W2018207366","https://openalex.org/W2026942141","https://openalex.org/W2027562621","https://openalex.org/W2031348767","https://openalex.org/W2038303173","https://openalex.org/W2040657708","https://openalex.org/W2049850610","https://openalex.org/W2068886104","https://openalex.org/W2073495809","https://openalex.org/W2079427367","https://openalex.org/W2080287072","https://openalex.org/W2081501570","https://openalex.org/W2115990221","https://openalex.org/W2117630412","https://openalex.org/W2118125070","https://openalex.org/W2134427620","https://openalex.org/W2142510328","https://openalex.org/W2144161366","https://openalex.org/W2151227169","https://openalex.org/W2158826174","https://openalex.org/W2988749684"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W3212037913","https://openalex.org/W2129611589","https://openalex.org/W1904308805","https://openalex.org/W2740362951","https://openalex.org/W2410077831","https://openalex.org/W3022381079","https://openalex.org/W4210614060","https://openalex.org/W240152639","https://openalex.org/W4388566120"],"abstract_inverted_index":{"Computational":[0],"Biology":[1],"celebrated":[2],"its":[3],"fifth":[4],"anniversary":[5],"in":[6,10,22,27,53,65,84,87,127],"2010,":[7,66],"and":[8,55,71,149,184,191],"all":[9],"our":[11,48,170],"community,":[12],"either":[13],"as":[14,89],"readers,":[15],"authors,":[16],"or":[17],"editors,":[18],"should":[19],"take":[20],"pride":[21],"what":[23],"has":[24],"been":[25],"accomplished":[26],"such":[28],"a":[29,44,56,101,139,166],"short":[30],"space":[31],"of":[32,51,73,99,141,194],"time.":[33],"In":[34],"the":[35,62,96,105,128,135,173,189],"past":[36,147],"year":[37,50,148],"we":[38,161,192],"received":[39],"1,403":[40],"new":[41,143],"Research":[42,111],"Articles,":[43],"295%":[45],"increase":[46,58,103],"from":[47,125],"first":[49],"operation":[52],"2005-2006":[54],"17%":[57],"over":[59,104],"2009.":[60],"Of":[61],"articles":[63,120],"submitted":[64],"875":[67],"(62%)":[68],"were":[69,75],"rejected,":[70],"70%":[72],"these":[74],"before":[76],"review.":[77],"We":[78,108,152],"have":[79],"seen":[80],"growth":[81],"not":[82],"only":[83],"submissions,":[85,137,190],"but":[86],"readership":[88],"well.":[90],"Currently,":[91],"around":[92],"16,000":[93],"readers":[94],"receive":[95],"electronic":[97],"table":[98],"contents,":[100],"14%":[102],"previous":[106,129],"year.":[107,130],"published":[109],"392":[110],"Articles":[112],"this":[113,146],"year,":[114],"along":[115],"with":[116,138,178],"23":[117],"''front":[118],"section''":[119],"(Reviews,":[121],"Perspectives,":[122],"Education),":[123],"down":[124],"33":[126],"Eighty":[131],"Associate":[132],"Editors":[133],"handled":[134],"combined":[136],"total":[140],"26":[142],"editors":[144,176,183],"joining":[145],"six":[150],"departing.":[151],"are":[153,193],"proud":[154],"to":[155,163,168,187],"say":[156],"that":[157],"virtually":[158],"every":[159],"editor":[160],"asked":[162],"join":[164],"accepted,":[165],"testament":[167],"how":[169],"community":[171],"values":[172],"journal.":[174],"These":[175],"worked":[177],"more":[179],"than":[180],"180":[181],"guest":[182],"1,800":[185],"reviewers":[186],"handle":[188],"course":[195],"very":[196],"grateful":[197],"for":[198],"their":[199],"support":[200],"(Table":[201]},"counts_by_year":[],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
