{"id":"https://openalex.org/W2139513028","doi":"https://doi.org/10.1371/journal.pcbi.1000456","title":"Towards Reproducible Descriptions of Neuronal Network Models","display_name":"Towards Reproducible Descriptions of Neuronal Network Models","publication_year":2009,"publication_date":"2009-08-06","ids":{"openalex":"https://openalex.org/W2139513028","doi":"https://doi.org/10.1371/journal.pcbi.1000456","mag":"2139513028","pmid":"https://pubmed.ncbi.nlm.nih.gov/19662159"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1000456","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1000456","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000456&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000456&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067473436","display_name":"Eilen Nordlie","orcid":null},"institutions":[{"id":"https://openalex.org/I54108979","display_name":"Norwegian University of Life Sciences","ror":"https://ror.org/04a1mvv97","country_code":"NO","type":"education","lineage":["https://openalex.org/I54108979"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Eilen Nordlie","raw_affiliation_strings":["Department of Mathematical Sciences and Technology, Norwegian University of Life Sciences, Aas, Norway"],"affiliations":[{"raw_affiliation_string":"Department of Mathematical Sciences and Technology, Norwegian University of Life Sciences, Aas, Norway","institution_ids":["https://openalex.org/I54108979"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039657185","display_name":"Marc-Oliver Gewaltig","orcid":"https://orcid.org/0000-0002-1566-8711"},"institutions":[{"id":"https://openalex.org/I4210112253","display_name":"Honda (Germany)","ror":"https://ror.org/022c1xk47","country_code":"DE","type":"company","lineage":["https://openalex.org/I1283473643","https://openalex.org/I4210112253"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Marc-Oliver Gewaltig","raw_affiliation_strings":["Honda Research Institute Europe GmbH, Offenbach, Germany","HONDA Research Institute Europe GmbH, Offenbach, Germany"],"affiliations":[{"raw_affiliation_string":"Honda Research Institute Europe GmbH, Offenbach, Germany","institution_ids":["https://openalex.org/I4210112253"]},{"raw_affiliation_string":"HONDA Research Institute Europe GmbH, Offenbach, Germany","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044075852","display_name":"Hans Ekkehard Ple\u00dfer","orcid":"https://orcid.org/0000-0001-7843-5993"},"institutions":[{"id":"https://openalex.org/I2800939219","display_name":"RIKEN Center for Brain Science","ror":"https://ror.org/04j1n1c04","country_code":"JP","type":"facility","lineage":["https://openalex.org/I2800939219","https://openalex.org/I4210110652"]},{"id":"https://openalex.org/I54108979","display_name":"Norwegian University of Life Sciences","ror":"https://ror.org/04a1mvv97","country_code":"NO","type":"education","lineage":["https://openalex.org/I54108979"]},{"id":"https://openalex.org/I2799829267","display_name":"Simula Research Laboratory","ror":"https://ror.org/00vn06n10","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2799829267"]}],"countries":["JP","NO"],"is_corresponding":true,"raw_author_name":"Hans Ekkehard Plesser","raw_affiliation_strings":["Center for Biomedical Computing, Simula Research Laboratory, Lysaker, Norway","Department of Mathematical Sciences and Technology, Norwegian University of Life Sciences, Aas, Norway","RIKEN Brain Science Institute, Wako-shi, Saitama, Japan"],"affiliations":[{"raw_affiliation_string":"Center for Biomedical Computing, Simula Research Laboratory, Lysaker, Norway","institution_ids":["https://openalex.org/I2799829267"]},{"raw_affiliation_string":"Department of Mathematical Sciences and Technology, Norwegian University of Life Sciences, Aas, Norway","institution_ids":["https://openalex.org/I54108979"]},{"raw_affiliation_string":"RIKEN Brain Science Institute, Wako-shi, Saitama, Japan","institution_ids":["https://openalex.org/I2800939219"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5044075852"],"corresponding_institution_ids":["https://openalex.org/I2799829267","https://openalex.org/I2800939219","https://openalex.org/I54108979"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":8.2993,"has_fulltext":true,"cited_by_count":184,"citation_normalized_percentile":{"value":0.98366815,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"5","issue":"8","first_page":"e1000456","last_page":"e1000456"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10320","display_name":"Neural Networks and Applications","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5048530697822571},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45236724615097046},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3274429142475128},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2580094635486603}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5048530697822571},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45236724615097046},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3274429142475128},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2580094635486603}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008564","descriptor_name":"Membrane Potentials","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008564","descriptor_name":"Membrane Potentials","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008564","descriptor_name":"Membrane Potentials","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pcbi.1000456","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1000456","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000456&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},{"id":"pmid:19662159","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19662159","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.797.897","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.797.897","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/4a/e4/pcbi.1000456.PMC2713426.pdf","raw_type":"text"},{"id":"pmh:oai:RePEc:plo:pcbi00:1000456","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1000456","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:08cb1fe7da604dcab6c2d6668134bc5b","is_oa":true,"landing_page_url":"https://doaj.org/article/08cb1fe7da604dcab6c2d6668134bc5b","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 5, Iss 8, p e1000456 (2009)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:1865453","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2713426","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:figshare.com:article/146805","is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Towards_Reproducible_Descriptions_of_Neuronal_Network_Models/146805","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1000456","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1000456","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000456&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4019504803","display_name":null,"funder_award_id":"178892","funder_id":"https://openalex.org/F4320323299","funder_display_name":"Norges Forskningsr\u00e5d"}],"funders":[{"id":"https://openalex.org/F4320323299","display_name":"Norges Forskningsr\u00e5d","ror":"https://ror.org/00epmv149"},{"id":"https://openalex.org/F4320324888","display_name":"Norges Milj\u00f8- og Biovitenskapelige Universitet","ror":"https://ror.org/04a1mvv97"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2139513028.pdf","grobid_xml":"https://content.openalex.org/works/W2139513028.grobid-xml"},"referenced_works_count":89,"referenced_works":["https://openalex.org/W78840005","https://openalex.org/W161810860","https://openalex.org/W209553811","https://openalex.org/W239579907","https://openalex.org/W629021573","https://openalex.org/W639309485","https://openalex.org/W1520349023","https://openalex.org/W1541343226","https://openalex.org/W1548362700","https://openalex.org/W1560731918","https://openalex.org/W1582051163","https://openalex.org/W1642165138","https://openalex.org/W1671780265","https://openalex.org/W1804277299","https://openalex.org/W1835879695","https://openalex.org/W1955585424","https://openalex.org/W1960161395","https://openalex.org/W1966654135","https://openalex.org/W1969437003","https://openalex.org/W1973327463","https://openalex.org/W1974979654","https://openalex.org/W1982602109","https://openalex.org/W2000851768","https://openalex.org/W2014890444","https://openalex.org/W2017419154","https://openalex.org/W2019884871","https://openalex.org/W2020561965","https://openalex.org/W2021173792","https://openalex.org/W2022129758","https://openalex.org/W2022419582","https://openalex.org/W2030620341","https://openalex.org/W2031316548","https://openalex.org/W2037964461","https://openalex.org/W2043679829","https://openalex.org/W2044742151","https://openalex.org/W2045478141","https://openalex.org/W2051356548","https://openalex.org/W2053619330","https://openalex.org/W2053621018","https://openalex.org/W2057819555","https://openalex.org/W2059715474","https://openalex.org/W2067423349","https://openalex.org/W2069169214","https://openalex.org/W2071633981","https://openalex.org/W2074040903","https://openalex.org/W2077509789","https://openalex.org/W2080573473","https://openalex.org/W2081209729","https://openalex.org/W2090943376","https://openalex.org/W2105893725","https://openalex.org/W2107062718","https://openalex.org/W2108083055","https://openalex.org/W2118033977","https://openalex.org/W2125637396","https://openalex.org/W2127918219","https://openalex.org/W2128392703","https://openalex.org/W2132250735","https://openalex.org/W2133938042","https://openalex.org/W2134919980","https://openalex.org/W2137413309","https://openalex.org/W2140886546","https://openalex.org/W2142483263","https://openalex.org/W2146384076","https://openalex.org/W2148329459","https://openalex.org/W2149991291","https://openalex.org/W2152502378","https://openalex.org/W2159049013","https://openalex.org/W2159749299","https://openalex.org/W2161585316","https://openalex.org/W2162859332","https://openalex.org/W2163130726","https://openalex.org/W2163464140","https://openalex.org/W2168059356","https://openalex.org/W2186125834","https://openalex.org/W2327344351","https://openalex.org/W2331193433","https://openalex.org/W2398751942","https://openalex.org/W2611578502","https://openalex.org/W2911607583","https://openalex.org/W4210897689","https://openalex.org/W4211182857","https://openalex.org/W4242098806","https://openalex.org/W4244237099","https://openalex.org/W4246062337","https://openalex.org/W4298862541","https://openalex.org/W4301319368","https://openalex.org/W6606626874","https://openalex.org/W6636617935","https://openalex.org/W6684001868"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Progress":[0],"in":[1,19,65,76,132,142,199,249,279],"science":[2],"depends":[3],"on":[4,145,230,258],"the":[5,60,80,116,121,133,139,159,193,215,269,290,293],"effective":[6],"exchange":[7,243],"of":[8,47,59,62,83,101,118,125,136,156,161,178,183,195,226,244,261,276,292],"ideas":[9,13,245],"among":[10,246],"scientists.":[11],"New":[12],"can":[14],"be":[15],"assessed":[16],"and":[17,39,56,104,120,123,138,174,233,240,282],"criticized":[18],"a":[20,54,150,163,190,200,224,238,273],"meaningful":[21],"manner":[22,201],"only":[23],"if":[24],"they":[25],"are":[26],"formulated":[27],"precisely.":[28],"This":[29,78],"applies":[30],"to":[31,37,109,114,188,203,207,237,251,272,286],"simulation":[32],"studies":[33],"as":[34,36,67,69,86,88,205],"well":[35,68,87],"experiments":[38],"theories.":[40],"But":[41],"after":[42],"more":[43,241],"than":[44],"50":[45],"years":[46,250],"neuronal":[48,98,196,265],"network":[49,74,84,99,197,280],"simulations,":[50],"we":[51,148],"still":[52],"lack":[53],"clear":[55],"common":[57],"understanding":[58,275],"role":[61],"computational":[63,247],"models":[64,75,85,100,198],"neuroscience":[66],"established":[70],"practices":[71],"for":[72,158,165,169,176],"describing":[73],"publications.":[77],"hinders":[79],"critical":[81],"evaluation":[82],"their":[89],"re-use.":[90],"We":[91,127,212,253],"analyze":[92],"here":[93],"14":[94],"research":[95],"papers":[96],"proposing":[97],"different":[102],"complexity":[103],"find":[105],"widely":[106],"varying":[107],"approaches":[108],"model":[110,152,166,172,209,217],"descriptions,":[111,167],"with":[112,223],"regard":[113],"both":[115],"means":[117],"description":[119,153,210,218],"ordering":[122],"placement":[124],"material.":[126],"further":[128,254],"observe":[129],"great":[130],"variation":[131],"graphical":[134],"representation":[135],"networks":[137,266],"notation":[140],"used":[141],"equations.":[143],"Based":[144],"our":[146],"observations,":[147],"propose":[149],"good":[151,185,216],"practice,":[154],"composed":[155],"guidelines":[157,175],"organization":[160],"publications,":[162],"checklist":[164],"templates":[168],"tables":[170],"presenting":[171],"structure,":[173],"diagrams":[177],"networks.":[179],"The":[180],"main":[181],"purpose":[182],"this":[184],"practice":[186,219],"is":[187],"trigger":[189],"debate":[191],"about":[192],"communication":[194],"comprehensible":[202],"humans,":[204],"opposed":[206],"machine-readable":[208],"languages.":[211],"believe":[213],"that":[214,256],"proposed":[220],"here,":[221],"together":[222],"number":[225],"other":[227],"recent":[228],"initiatives":[229],"data-,":[231],"model-,":[232],"software-sharing,":[234],"may":[235],"lead":[236,268,285],"deeper":[239,287],"fruitful":[242],"neuroscientists":[248],"come.":[252],"hope":[255],"work":[257],"standardized":[259],"ways":[260],"describing--and":[262],"thinking":[263],"about--complex":[264],"will":[267,283],"scientific":[270],"community":[271],"clearer":[274],"high-level":[277],"concepts":[278],"dynamics,":[281],"thus":[284],"insights":[288],"into":[289],"function":[291],"brain.":[294]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":15},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":9},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":13},{"year":2012,"cited_by_count":20}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
