{"id":"https://openalex.org/W1998529967","doi":"https://doi.org/10.1371/journal.pcbi.1000377","title":"Dating the Age of the SIV Lineages That Gave Rise to HIV-1 and HIV-2","display_name":"Dating the Age of the SIV Lineages That Gave Rise to HIV-1 and HIV-2","publication_year":2009,"publication_date":"2009-04-30","ids":{"openalex":"https://openalex.org/W1998529967","doi":"https://doi.org/10.1371/journal.pcbi.1000377","mag":"1998529967","pmid":"https://pubmed.ncbi.nlm.nih.gov/19412344"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1000377","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1000377","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000377&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000377&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069232831","display_name":"Joel O. Wertheim","orcid":"https://orcid.org/0000-0003-4882-5856"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Joel O. Wertheim","raw_affiliation_strings":["Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA. wertheim@email.arizona.edu","Department of Ecology and Evolutionary Biology University of Arizona  Tucson AZ USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA. wertheim@email.arizona.edu","institution_ids":["https://openalex.org/I138006243"]},{"raw_affiliation_string":"Department of Ecology and Evolutionary Biology University of Arizona  Tucson AZ USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019663083","display_name":"Michael Worobey","orcid":"https://orcid.org/0000-0002-3578-1367"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Worobey","raw_affiliation_strings":["Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, United States of America","Department of Ecology & Evolutionary Biology, University of Arizona, Tucson, Arizona, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, United States of America","institution_ids":["https://openalex.org/I138006243"]},{"raw_affiliation_string":"Department of Ecology & Evolutionary Biology, University of Arizona, Tucson, Arizona, United States of America","institution_ids":["https://openalex.org/I138006243"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5069232831"],"corresponding_institution_ids":["https://openalex.org/I138006243"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":6.2273,"has_fulltext":true,"cited_by_count":178,"citation_normalized_percentile":{"value":0.97385884,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"5","issue":"5","first_page":"e1000377","last_page":"e1000377"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.9706000089645386,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14334","display_name":"HIV/AIDS Impact and Responses","score":0.9656999707221985,"subfield":{"id":"https://openalex.org/subfields/2002","display_name":"Economics and Econometrics"},"field":{"id":"https://openalex.org/fields/20","display_name":"Economics, Econometrics and Finance"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/human-immunodeficiency-virus","display_name":"Human immunodeficiency virus (HIV)","score":0.7789926528930664},{"id":"https://openalex.org/keywords/simian-immunodeficiency-virus","display_name":"Simian immunodeficiency virus","score":0.6030363440513611},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.5221324563026428},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.47554609179496765}],"concepts":[{"id":"https://openalex.org/C3013748606","wikidata":"https://www.wikidata.org/wiki/Q15787","display_name":"Human immunodeficiency virus (HIV)","level":2,"score":0.7789926528930664},{"id":"https://openalex.org/C2777995582","wikidata":"https://www.wikidata.org/wiki/Q1890246","display_name":"Simian immunodeficiency virus","level":3,"score":0.6030363440513611},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5221324563026428},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.47554609179496765}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002679","descriptor_name":"Pan troglodytes","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D002679","descriptor_name":"Pan troglodytes","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D002679","descriptor_name":"Pan troglodytes","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013995","descriptor_name":"Time","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013995","descriptor_name":"Time","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013995","descriptor_name":"Time","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015302","descriptor_name":"Simian Immunodeficiency Virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015302","descriptor_name":"Simian Immunodeficiency Virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015302","descriptor_name":"Simian Immunodeficiency Virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015498","descriptor_name":"HIV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015498","descriptor_name":"HIV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015498","descriptor_name":"HIV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D015750","descriptor_name":"Genes, gag","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015750","descriptor_name":"Genes, gag","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015750","descriptor_name":"Genes, gag","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015751","descriptor_name":"Genes, pol","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015751","descriptor_name":"Genes, pol","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015751","descriptor_name":"Genes, pol","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015752","descriptor_name":"Genes, env","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015752","descriptor_name":"Genes, env","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015752","descriptor_name":"Genes, env","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016097","descriptor_name":"Simian Acquired Immunodeficiency Syndrome","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D016097","descriptor_name":"Simian Acquired Immunodeficiency Syndrome","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D016097","descriptor_name":"Simian Acquired Immunodeficiency Syndrome","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016665","descriptor_name":"Cercocebus atys","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D016665","descriptor_name":"Cercocebus atys","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D016665","descriptor_name":"Cercocebus atys","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1371/journal.pcbi.1000377","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1000377","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000377&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},{"id":"pmid:19412344","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19412344","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.794.3205","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.794.3205","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/71/d5/pcbi.1000377.PMC2669881.pdf","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:4113642e66794c00b851aebc357048b8","is_oa":true,"landing_page_url":"https://doaj.org/article/4113642e66794c00b851aebc357048b8","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 5, Iss 5, p e1000377 (2009)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/147725","is_oa":true,"landing_page_url":"https://figshare.com/articles/Dating_the_Age_of_the_SIV_Lineages_That_Gave_Rise_to_HIV_1_and_HIV_2/147725","pdf_url":null,"source":{"id":"https://openalex.org/S4306402621","display_name":"INDIGO (University of Illinois at Chicago)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I39422238","host_organization_name":"University of Illinois Chicago","host_organization_lineage":["https://openalex.org/I39422238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pubmedcentral.nih.gov:2669881","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2669881","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1000377","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1000377","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000377&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.8500000238418579}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306079","display_name":"David and Lucile Packard Foundation","ror":"https://ror.org/032atxq54"},{"id":"https://openalex.org/F4320310160","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1998529967.pdf","grobid_xml":"https://content.openalex.org/works/W1998529967.grobid-xml"},"referenced_works_count":46,"referenced_works":["https://openalex.org/W1546828436","https://openalex.org/W1659932244","https://openalex.org/W1971882980","https://openalex.org/W1988109653","https://openalex.org/W1991849538","https://openalex.org/W2001806929","https://openalex.org/W2022756574","https://openalex.org/W2029353650","https://openalex.org/W2034858284","https://openalex.org/W2044916494","https://openalex.org/W2052219130","https://openalex.org/W2058728528","https://openalex.org/W2089384420","https://openalex.org/W2092866733","https://openalex.org/W2094939159","https://openalex.org/W2097231226","https://openalex.org/W2097382368","https://openalex.org/W2098433844","https://openalex.org/W2103139187","https://openalex.org/W2110835349","https://openalex.org/W2115972379","https://openalex.org/W2116433762","https://openalex.org/W2123563614","https://openalex.org/W2124627199","https://openalex.org/W2126199339","https://openalex.org/W2126531452","https://openalex.org/W2133636845","https://openalex.org/W2134771735","https://openalex.org/W2135763337","https://openalex.org/W2138930698","https://openalex.org/W2140665904","https://openalex.org/W2142574667","https://openalex.org/W2143334889","https://openalex.org/W2143746087","https://openalex.org/W2146602601","https://openalex.org/W2152315568","https://openalex.org/W2153432740","https://openalex.org/W2154963941","https://openalex.org/W2158892874","https://openalex.org/W2161033472","https://openalex.org/W2162314119","https://openalex.org/W2162829158","https://openalex.org/W2167788081","https://openalex.org/W2169623461","https://openalex.org/W4285719527","https://openalex.org/W6632567943"],"related_works":["https://openalex.org/W2103160203","https://openalex.org/W2168298661","https://openalex.org/W2147242819","https://openalex.org/W2136865326","https://openalex.org/W2135838591","https://openalex.org/W2111089028","https://openalex.org/W2106328594","https://openalex.org/W2407681134","https://openalex.org/W2143473353","https://openalex.org/W2160388435"],"abstract_inverted_index":{"Great":[0],"strides":[1],"have":[2],"been":[3,34],"made":[4],"in":[5,36,86,97,128,140],"understanding":[6],"the":[7,16,40,54,62,69,79,95,126,134,155,158,165,178,188,195],"evolutionary":[8],"history":[9],"of":[10,56,71,78,84,136,138,147,157,187,197,200],"simian":[11],"immunodeficiency":[12],"virus":[13],"(SIV)":[14],"and":[15,23,66,73,94,131,163,185],"zoonoses":[17],"that":[18,109,146,206,215],"gave":[19],"rise":[20],"to":[21,42,52,90,102,120],"HIV-1":[22,72,170],"HIV-2.":[24,151],"What":[25],"remains":[26],"unknown":[27],"is":[28,88,100,143,208],"how":[29],"long":[30],"these":[31],"SIVs":[32,63],"had":[33],"circulating":[35],"non-human":[37],"primates":[38],"before":[39],"transmissions":[41],"humans.":[43],"Here,":[44],"we":[45,107],"use":[46],"relaxed":[47],"molecular":[48,123],"clock":[49],"dating":[50,220],"techniques":[51],"estimate":[53,154,168],"time":[55],"most":[57,80,180],"recent":[58,81,181],"common":[59,82,182],"ancestor":[60,83,183],"for":[61,169],"infecting":[64],"chimpanzees":[65,87],"sooty":[67,98,114,141],"mangabeys,":[68],"reservoirs":[70],"HIV-2,":[74],"respectively.":[75],"The":[76],"date":[77,96],"SIV":[85,110,139,179,207,216],"estimated":[89,101],"be":[91,103],"1492":[92],"(1266-1685),":[93],"mangabeys":[99,115,142],"1809":[104],"(1729-1875).":[105],"Notably,":[106],"demonstrate":[108],"sequences":[111],"sampled":[112],"from":[113,145],"possess":[116],"sufficient":[117],"clock-like":[118],"signal":[119],"calibrate":[121],"a":[122,192,209],"clock;":[124],"despite":[125],"differences":[127],"host":[129],"biology":[130],"viral":[132],"dynamics,":[133],"rate":[135],"evolution":[137],"indistinguishable":[144],"its":[148],"human":[149],"counterpart,":[150],"We":[152],"also":[153],"ages":[156],"HIV-2":[159],"human-to-human":[160],"transmissible":[161],"lineages":[162,190],"provide":[164],"first":[166],"age":[167],"group":[171],"N":[172],"at":[173],"1963":[174],"(1948-1977).":[175],"Comparisons":[176],"between":[177],"dates":[184],"those":[186],"HIV":[189,219],"suggest":[191,204],"difference":[193],"on":[194],"order":[196],"only":[198],"hundreds":[199],"years.":[201],"Our":[202],"results":[203],"either":[205],"surprisingly":[210],"young":[211],"lentiviral":[212],"lineage":[213],"or":[214],"and,":[217],"perhaps,":[218],"estimates":[221],"are":[222],"seriously":[223],"compromised":[224],"by":[225],"unaccounted-for":[226],"biases.":[227]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":14},{"year":2018,"cited_by_count":10},{"year":2017,"cited_by_count":15},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":15},{"year":2013,"cited_by_count":20},{"year":2012,"cited_by_count":16}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
