{"id":"https://openalex.org/W2097936772","doi":"https://doi.org/10.1371/journal.pcbi.1000173","title":"Support Vector Machines and Kernels for Computational Biology","display_name":"Support Vector Machines and Kernels for Computational Biology","publication_year":2008,"publication_date":"2008-10-30","ids":{"openalex":"https://openalex.org/W2097936772","doi":"https://doi.org/10.1371/journal.pcbi.1000173","mag":"2097936772","pmid":"https://pubmed.ncbi.nlm.nih.gov/18974822"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pcbi.1000173","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1000173","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000173&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000173&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005013902","display_name":"Asa Ben\u2010Hur","orcid":"https://orcid.org/0000-0001-8269-6942"},"institutions":[{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Asa Ben-Hur","raw_affiliation_strings":["Department of Computer Science, Colorado State University, Fort Collins, CO, USA","Department of Computer Science, Colorado State University, Fort Collins, Colorado, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Colorado State University, Fort Collins, CO, USA","institution_ids":["https://openalex.org/I92446798"]},{"raw_affiliation_string":"Department of Computer Science, Colorado State University, Fort Collins, Colorado, United States of America","institution_ids":["https://openalex.org/I92446798"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016073964","display_name":"Cheng Soon Ong","orcid":"https://orcid.org/0000-0002-2302-9733"},"institutions":[{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"funder","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I4210112925","display_name":"Max Planck Institute for Biological Cybernetics","ror":"https://ror.org/026nmvv73","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210112925"]},{"id":"https://openalex.org/I4210147862","display_name":"Friedrich Miescher Laboratory","ror":"https://ror.org/04vh1tq58","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210147862"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Cheng Soon Ong","raw_affiliation_strings":["Friedrich Miescher Laboratory, Max Planck Society, T\u00fcbingen, Germany","Max Planck Institute for Biological Cybernetics, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Friedrich Miescher Laboratory, Max Planck Society, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210147862","https://openalex.org/I149899117"]},{"raw_affiliation_string":"Max Planck Institute for Biological Cybernetics, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210112925"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110197966","display_name":"S\u00f6ren Sonnenburg","orcid":null},"institutions":[{"id":"https://openalex.org/I4923324","display_name":"Fraunhofer Society","ror":"https://ror.org/05hkkdn48","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"S\u00f6ren Sonnenburg","raw_affiliation_strings":["Fraunhofer Institute FIRST, Berlin, Germany"],"affiliations":[{"raw_affiliation_string":"Fraunhofer Institute FIRST, Berlin, Germany","institution_ids":["https://openalex.org/I4923324"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044005697","display_name":"Bernhard Sch\u00f6lkopf","orcid":"https://orcid.org/0000-0002-8177-0925"},"institutions":[{"id":"https://openalex.org/I4210112925","display_name":"Max Planck Institute for Biological Cybernetics","ror":"https://ror.org/026nmvv73","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210112925"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Bernhard Sch\u00f6lkopf","raw_affiliation_strings":["Max Planck Institute for Biological Cybernetics, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Max Planck Institute for Biological Cybernetics, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210112925"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035416263","display_name":"Gunnar R\u00e4tsch","orcid":"https://orcid.org/0000-0001-5486-8532"},"institutions":[{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"funder","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I4210147862","display_name":"Friedrich Miescher Laboratory","ror":"https://ror.org/04vh1tq58","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210147862"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Gunnar R\u00e4tsch","raw_affiliation_strings":["Friedrich Miescher Laboratory, Max Planck Society, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Friedrich Miescher Laboratory, Max Planck Society, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210147862","https://openalex.org/I149899117"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5035416263"],"corresponding_institution_ids":["https://openalex.org/I149899117","https://openalex.org/I4210147862"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":12.1709,"has_fulltext":true,"cited_by_count":714,"citation_normalized_percentile":{"value":0.9914926,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"4","issue":"10","first_page":"e1000173","last_page":"e1000173"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5162737369537354},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.513107419013977},{"id":"https://openalex.org/keywords/vector","display_name":"Vector (molecular biology)","score":0.48758190870285034},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.46888113021850586},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4182174503803253},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3105977773666382},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11935988068580627}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5162737369537354},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.513107419013977},{"id":"https://openalex.org/C92087593","wikidata":"https://www.wikidata.org/wiki/Q427389","display_name":"Vector (molecular biology)","level":4,"score":0.48758190870285034},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.46888113021850586},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4182174503803253},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3105977773666382},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11935988068580627},{"id":"https://openalex.org/C40767141","wikidata":"https://www.wikidata.org/wiki/Q285697","display_name":"Recombinant DNA","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003661","descriptor_name":"Decision Support Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003661","descriptor_name":"Decision Support Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003661","descriptor_name":"Decision Support Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":11,"locations":[{"id":"doi:10.1371/journal.pcbi.1000173","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1000173","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000173&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},{"id":"pmid:18974822","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18974822","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS computational biology","raw_type":null},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/14839","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/14839","pdf_url":"http://hdl.handle.net/20.500.11850/14839","source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"PLoS Computational Biology, 4 (10)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:RePEc:plo:pcbi00:1000173","is_oa":false,"landing_page_url":"https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1000173","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:0eb95ead3f7e4d83bc0841d5bf0ff95f","is_oa":true,"landing_page_url":"https://doaj.org/article/0eb95ead3f7e4d83bc0841d5bf0ff95f","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, Vol 4, Iss 10, p e1000173 (2008)","raw_type":"article"},{"id":"pmh:oai:edoc.mpg.de:419878","is_oa":false,"landing_page_url":"http://edoc.mpg.de/419878","pdf_url":null,"source":{"id":"https://openalex.org/S4406922265","display_name":"Max Planck Institute for Plasma Physics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology, v.4, 1-10 (2008)","raw_type":"Article"},{"id":"pmh:oai:fraunhofer.de:N-87143","is_oa":false,"landing_page_url":"http://publica.fraunhofer.de/documents/N-87143.html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400801","display_name":"Publikationsdatenbank der Fraunhofer-Gesellschaft (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Fraunhofer FIRST","raw_type":"Journal Article"},{"id":"pmh:oai:publica.fraunhofer.de:publica/216838","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/216838","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2547983","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2547983","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Comput Biol","raw_type":"Text"},{"id":"pmh:oai:pure.mpg.de:item_1789595","is_oa":false,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-0013-C6B3-5","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Computational Biology","raw_type":"info:eu-repo/semantics/article"},{"id":"doi:10.3929/ethz-b-000014839","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000014839","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1371/journal.pcbi.1000173","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1000173","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000173&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Computational Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.6899999976158142}],"awards":[{"id":"https://openalex.org/G55583043","display_name":null,"funder_award_id":"0754247","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2097936772.pdf","grobid_xml":"https://content.openalex.org/works/W2097936772.grobid-xml"},"referenced_works_count":87,"referenced_works":["https://openalex.org/W4986281","https://openalex.org/W81444330","https://openalex.org/W172019652","https://openalex.org/W1480376833","https://openalex.org/W1510073064","https://openalex.org/W1524761913","https://openalex.org/W1526741802","https://openalex.org/W1542652324","https://openalex.org/W1570448133","https://openalex.org/W1574862351","https://openalex.org/W1652158306","https://openalex.org/W1663973292","https://openalex.org/W1861597095","https://openalex.org/W1968114652","https://openalex.org/W1973714307","https://openalex.org/W1975588116","https://openalex.org/W1976526581","https://openalex.org/W1979262621","https://openalex.org/W1984794455","https://openalex.org/W2002969314","https://openalex.org/W2020816856","https://openalex.org/W2035720976","https://openalex.org/W2041877620","https://openalex.org/W2051631967","https://openalex.org/W2062649377","https://openalex.org/W2063861171","https://openalex.org/W2087347434","https://openalex.org/W2098689079","https://openalex.org/W2099401974","https://openalex.org/W2099438806","https://openalex.org/W2099862356","https://openalex.org/W2106868411","https://openalex.org/W2108995755","https://openalex.org/W2109936378","https://openalex.org/W2111765516","https://openalex.org/W2114281975","https://openalex.org/W2114690085","https://openalex.org/W2119603641","https://openalex.org/W2119821739","https://openalex.org/W2123152930","https://openalex.org/W2127464112","https://openalex.org/W2128097790","https://openalex.org/W2132005946","https://openalex.org/W2135106139","https://openalex.org/W2135514714","https://openalex.org/W2137219016","https://openalex.org/W2143426320","https://openalex.org/W2153635508","https://openalex.org/W2154462399","https://openalex.org/W2156909104","https://openalex.org/W2158266834","https://openalex.org/W2161195767","https://openalex.org/W2161444669","https://openalex.org/W2170960297","https://openalex.org/W2283504545","https://openalex.org/W2296319761","https://openalex.org/W2533703023","https://openalex.org/W2539868084","https://openalex.org/W2799061466","https://openalex.org/W3007254004","https://openalex.org/W3023786531","https://openalex.org/W3037345322","https://openalex.org/W3041019241","https://openalex.org/W3120421331","https://openalex.org/W3144379435","https://openalex.org/W3217008510","https://openalex.org/W4205687621","https://openalex.org/W4212863985","https://openalex.org/W4239510810","https://openalex.org/W4243367342","https://openalex.org/W4250589301","https://openalex.org/W4300177848","https://openalex.org/W6603305907","https://openalex.org/W6629510986","https://openalex.org/W6642470415","https://openalex.org/W6659037626","https://openalex.org/W6663668235","https://openalex.org/W6672247373","https://openalex.org/W6674909436","https://openalex.org/W6677052679","https://openalex.org/W6678099486","https://openalex.org/W6679308157","https://openalex.org/W6683181193","https://openalex.org/W6683794572","https://openalex.org/W6728806308","https://openalex.org/W6792873609","https://openalex.org/W7014191107"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W2151865869","https://openalex.org/W2117258802","https://openalex.org/W4234157524"],"abstract_inverted_index":{"The":[0,143,184],"increasing":[1],"wealth":[2],"of":[3,11,17,47,67,77,82,87,139,146,162,186,195,270],"biological":[4,23,64],"data":[5,34,49,140],"coming":[6],"from":[7,56,80,253],"a":[8,39,83,147,213],"large":[9,130,178,187,271],"variety":[10],"platforms":[12],"and":[13,91,99,129,132,181,216,224,262],"the":[14,44,48,57,68,75,208,226,231,241,254,268,279],"continued":[15],"development":[16],"new":[18],"high-throughput":[19],"methods":[20,102],"for":[21],"probing":[22],"systems":[24],"require":[25],"increasingly":[26],"more":[27],"sophisticated":[28],"computational":[29,71,116],"approaches.":[30],"Putting":[31],"all":[32],"these":[33],"in":[35,70,74,93,115,135,197,256,278],"simple-to-use":[36],"databases":[37],"is":[38,150,210,247,275],"first":[40],"step;":[41],"but":[42],"realizing":[43],"full":[45],"potential":[46],"requires":[50],"algorithms":[51],"that":[52,158,245],"automatically":[53],"extract":[54],"regularities":[55],"data,":[58],"which":[59,274],"can":[60,190],"then":[61],"lead":[62],"to":[63,119,125,154,160,174,206,211],"insight.":[65],"Many":[66],"problems":[69,109],"biology":[72,117],"are":[73,103,112,234],"form":[76,145],"prediction:":[78],"starting":[79],"prediction":[81,86,148],"gene's":[84],"structure,":[85],"its":[88],"function,":[89],"interactions,":[90],"role":[92],"disease.":[94],"Support":[95],"vector":[96],"machines":[97],"(SVMs)":[98],"related":[100],"kernel":[101,182],"extremely":[104],"good":[105],"at":[106],"solving":[107],"such":[108,244],"[1]\u2013[3].":[110],"SVMs":[111,169],"widely":[113],"used":[114],"due":[118],"their":[120,123,133],"high":[121],"accuracy,":[122],"ability":[124],"deal":[126],"with":[127,282],"high-dimensional":[128],"datasets,":[131],"flexibility":[134],"modeling":[136],"diverse":[137],"sources":[138],"[2],":[141],"[4]\u2013[6].":[142],"simplest":[144],"problem":[149],"binary":[151],"classification:":[152],"trying":[153],"discriminate":[155],"between":[156],"objects":[157],"belong":[159],"one":[161,221,237],"two":[163,171,198,232],"categories\u2014positive":[164],"(+1)":[165],"or":[166],"negative":[167],"(\u22121).":[168],"use":[170],"key":[172],"concepts":[173],"solve":[175],"this":[176],"problem:":[177],"margin":[179,188,272],"separation":[180,189],"functions.":[183],"idea":[185,269],"be":[191],"motivated":[192],"by":[193],"classification":[194],"points":[196,209,218,255],"dimensions":[199],"(see":[200,259],"Figure":[201],"1).":[202],"A":[203],"simple":[204],"way":[205],"classify":[207],"draw":[212,240],"straight":[214],"line":[215,243],"call":[217],"lying":[219],"on":[220,225],"side":[222,228],"positive":[223],"other":[227],"negative.":[229],"If":[230],"sets":[233,258],"well":[235],"separated,":[236],"would":[238],"intuitively":[239],"separating":[242],"it":[246],"as":[248,250],"far":[249],"possible":[251],"away":[252],"both":[257],"Figures":[260],"2":[261],"3).":[263],"This":[264],"intuitive":[265],"choice":[266],"captures":[267],"separation,":[273],"mathematically":[276],"formulated":[277],"section":[280],"Classification":[281],"Large":[283],"Margin.":[284]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":40},{"year":2024,"cited_by_count":40},{"year":2023,"cited_by_count":34},{"year":2022,"cited_by_count":45},{"year":2021,"cited_by_count":36},{"year":2020,"cited_by_count":71},{"year":2019,"cited_by_count":45},{"year":2018,"cited_by_count":41},{"year":2017,"cited_by_count":49},{"year":2016,"cited_by_count":46},{"year":2015,"cited_by_count":46},{"year":2014,"cited_by_count":33},{"year":2013,"cited_by_count":47},{"year":2012,"cited_by_count":49}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
