{"id":"https://openalex.org/W3082459654","doi":"https://doi.org/10.13016/m2gx44z1h","title":"SOFTWARE INFRASTRUCTURE FOR VISUAL AND INTEGRATIVE ANALYSIS OF MICROBIOME DATA","display_name":"SOFTWARE INFRASTRUCTURE FOR VISUAL AND INTEGRATIVE ANALYSIS OF MICROBIOME DATA","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W3082459654","doi":"https://doi.org/10.13016/m2gx44z1h","mag":"3082459654"},"language":"en","primary_location":{"id":"pmh:oai:drum.lib.umd.edu:1903/21141","is_oa":true,"landing_page_url":"https://doi.org/10.13016/M2GX44Z1H","pdf_url":"http://hdl.handle.net/1903/21141","source":{"id":"https://openalex.org/S4306402644","display_name":"Digital Repository at the University of Maryland (University of Maryland College Park)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66946132","host_organization_name":"University of Maryland, College Park","host_organization_lineage":["https://openalex.org/I66946132"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dissertation"},"type":"dissertation","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/1903/21141","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082000812","display_name":"Justin Wagner","orcid":"https://orcid.org/0009-0003-8903-0504"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Wagner, Justin","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5082000812"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11891","display_name":"Big Data and Business Intelligence","score":0.1995999962091446,"subfield":{"id":"https://openalex.org/subfields/1404","display_name":"Management Information Systems"},"field":{"id":"https://openalex.org/fields/14","display_name":"Business, Management and Accounting"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11891","display_name":"Big Data and Business Intelligence","score":0.1995999962091446,"subfield":{"id":"https://openalex.org/subfields/1404","display_name":"Management Information Systems"},"field":{"id":"https://openalex.org/fields/14","display_name":"Business, Management and Accounting"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6002336740493774},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.5810614228248596},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.46494215726852417},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.46230804920196533},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3318807780742645},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3226039409637451},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16634657979011536},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.16192644834518433},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08650508522987366}],"concepts":[{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6002336740493774},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.5810614228248596},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.46494215726852417},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.46230804920196533},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3318807780742645},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3226039409637451},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16634657979011536},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.16192644834518433},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08650508522987366}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:drum.lib.umd.edu:1903/21141","is_oa":true,"landing_page_url":"https://doi.org/10.13016/M2GX44Z1H","pdf_url":"http://hdl.handle.net/1903/21141","source":{"id":"https://openalex.org/S4306402644","display_name":"Digital Repository at the University of Maryland (University of Maryland College Park)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66946132","host_organization_name":"University of Maryland, College Park","host_organization_lineage":["https://openalex.org/I66946132"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dissertation"},{"id":"mag:3082459654","is_oa":false,"landing_page_url":"https://drum.lib.umd.edu/handle/1903/21141","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":null},{"id":"doi:10.13016/m2gx44z1h","is_oa":true,"landing_page_url":"https://doi.org/10.13016/m2gx44z1h","pdf_url":null,"source":{"id":"https://openalex.org/S4306402644","display_name":"Digital Repository at the University of Maryland (University of Maryland College Park)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66946132","host_organization_name":"University of Maryland, College Park","host_organization_lineage":["https://openalex.org/I66946132"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"thesis"}],"best_oa_location":{"id":"pmh:oai:drum.lib.umd.edu:1903/21141","is_oa":true,"landing_page_url":"https://doi.org/10.13016/M2GX44Z1H","pdf_url":"http://hdl.handle.net/1903/21141","source":{"id":"https://openalex.org/S4306402644","display_name":"Digital Repository at the University of Maryland (University of Maryland College Park)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66946132","host_organization_name":"University of Maryland, College Park","host_organization_lineage":["https://openalex.org/I66946132"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dissertation"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.6100000143051147,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W3082459654.pdf"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W824115470","https://openalex.org/W2166608280","https://openalex.org/W2294410074","https://openalex.org/W1967624527","https://openalex.org/W2767154380","https://openalex.org/W2906330222","https://openalex.org/W2124976125","https://openalex.org/W2273938431","https://openalex.org/W2005527191","https://openalex.org/W2065302863","https://openalex.org/W2801389618"],"abstract_inverted_index":{"Microbiome":[0,106],"sequencing":[1],"allows":[2],"researchers":[3,34],"to":[4,59,63,116,157],"reconstruct":[5],"bacterial":[6],"community":[7,25],"census":[8],"profiles":[9,26],"at":[10],"resolutions":[11],"greater":[12],"than":[13],"previous":[14,130],"methodologies.":[15],"As":[16],"a":[17,61,113,152],"result,":[18],"increasingly":[19],"large":[20],"numbers":[21],"of":[22,52,66,101,161],"these":[23],"taxonomic":[24,88],"are":[27],"now":[28],"generated,":[29],"analyzed,":[30],"and":[31,45,50,68,80,91],"published":[32],"by":[33],"in":[35,137],"the":[36,99,104],"field.":[37],"In":[38],"this":[39],"work,":[40],"I":[41,74,96,110,148],"present":[42],"new":[43],"methods":[44],"software":[46,150],"infrastructure":[47],"for":[48,86,172],"visualization":[49],"sharing":[51],"microbiome":[53,146],"data.":[54,73,147],"The":[55],"overall":[56],"goal":[57],"is":[58],"enable":[60],"researcher":[62],"complete":[64,158],"cycles":[65],"exploratory":[67],"confirmatory":[69],"analysis":[70,82,93],"over":[71,127],"metagenomic":[72,162],"describe":[75],"Metaviz,":[76],"an":[77,125,138],"interactive":[78],"statistical":[79],"visual":[81],"tool":[83],"specifically":[84],"designed":[85],"effective":[87],"hierarchy":[89],"navigation":[90],"data":[92,119,163],"feature":[94,169],"selection.":[95],"next":[97],"detail":[98],"incorporation":[100],"Metaviz":[102],"into":[103],"Human":[105],"Project":[107],"Data":[108],"Portal.":[109],"then":[111],"show":[112],"novel":[114],"method":[115],"visualize":[117],"longitudinal":[118],"across":[120,164],"multiple":[121],"features":[122],"built":[123],"as":[124],"extension":[126],"Metaviz.":[128],"Finally,":[129],"work":[131],"has":[132],"shown":[133],"that":[134],"specific":[135],"subjects":[136],"experimental":[139],"cohort":[140],"can":[141],"be":[142],"identified":[143],"using":[144,151],"their":[145],"developed":[149],"secure":[153],"multi-party":[154],"computation":[155],"library":[156],"comparative":[159],"analyses":[160],"cohorts":[165],"without":[166],"directly":[167],"revealing":[168],"count":[170],"values":[171],"individuals.":[173]},"counts_by_year":[],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
