{"id":"https://openalex.org/W3112584415","doi":"https://doi.org/10.12688/f1000research.26459.1","title":"Uncovering host-microbiome interactions in global systems with collaborative programming: a novel approach integrating social and data sciences","display_name":"Uncovering host-microbiome interactions in global systems with collaborative programming: a novel approach integrating social and data sciences","publication_year":2020,"publication_date":"2020-12-17","ids":{"openalex":"https://openalex.org/W3112584415","doi":"https://doi.org/10.12688/f1000research.26459.1","mag":"3112584415"},"language":"en","primary_location":{"id":"doi:10.12688/f1000research.26459.1","is_oa":true,"landing_page_url":"https://doi.org/10.12688/f1000research.26459.1","pdf_url":null,"source":{"id":"https://openalex.org/S4210239046","display_name":"F1000Research","issn_l":"2046-1402","issn":["2046-1402"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320357","host_organization_name":"Faculty of 1000","host_organization_lineage":["https://openalex.org/P4310320357"],"host_organization_lineage_names":["Faculty of 1000"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":"journal-article"},"type":"preprint","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.12688/f1000research.26459.1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006341111","display_name":"Jenna Oberstaller","orcid":"https://orcid.org/0000-0002-3033-2212"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jenna Oberstaller","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034330439","display_name":"Swamy R. Adapa","orcid":"https://orcid.org/0000-0003-3313-2782"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Swamy Rakesh Adapa","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038569571","display_name":"Guy W. Dayhoff","orcid":"https://orcid.org/0000-0003-4271-7125"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guy W. Dayhoff II","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044145731","display_name":"Justin Gibbons","orcid":"https://orcid.org/0000-0001-7156-6704"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Justin Gibbons","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072387810","display_name":"Thomas E. Keller","orcid":"https://orcid.org/0000-0002-9198-5073"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas E. Keller","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100429532","display_name":"Chang Li","orcid":"https://orcid.org/0000-0002-7823-3467"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chang Li","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054108248","display_name":"Shen Jean Lim","orcid":"https://orcid.org/0000-0003-4578-5318"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jean Lim","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088028488","display_name":"Minh Pham","orcid":"https://orcid.org/0000-0003-3981-0951"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Minh Pham","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008360322","display_name":"Anujit Sarkar","orcid":"https://orcid.org/0000-0003-3170-2542"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anujit Sarkar","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038925845","display_name":"Ravi Datta Sharma","orcid":"https://orcid.org/0000-0002-1723-3113"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ravi Sharma","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012174646","display_name":"Agaz H. Wani","orcid":"https://orcid.org/0000-0002-0540-2952"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Agaz H. Wani","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101665269","display_name":"Andrea Vianello","orcid":"https://orcid.org/0000-0002-2323-6767"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrea Vianello","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086869860","display_name":"Linh M. Duong","orcid":"https://orcid.org/0000-0002-2569-5326"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Linh M. Duong","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107354959","display_name":"Chenggi Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chenggi Wang","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067058392","display_name":"Celine Grace F. Atkinson","orcid":"https://orcid.org/0009-0008-2072-3843"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Celine Grace F. Atkinson","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101097783","display_name":"Madeleine Barrow","orcid":null},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Madeleine Barrow","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035621983","display_name":"Nathan W. Van Bibber","orcid":null},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nathan W. Van Bibber","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006269392","display_name":"Jan Dahrendorff","orcid":"https://orcid.org/0000-0003-4114-6842"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jan Dahrendorff","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105422611","display_name":"David Allen Dean","orcid":null},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David A. E. Dean","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020760492","display_name":"Omkar Dokur","orcid":"https://orcid.org/0000-0002-7897-8178"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Omkar Dokur","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090862190","display_name":"Gl\u00f3ria C. Ferreira","orcid":"https://orcid.org/0000-0001-9279-2217"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gloria C. Ferreira","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027042014","display_name":"M. S. Hastings","orcid":"https://orcid.org/0000-0003-4722-6237"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mitchell Hastings","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005744444","display_name":"Gregory S. Herbert","orcid":"https://orcid.org/0000-0001-7312-6147"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gregory S. Herbert","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084809999","display_name":"Khandaker Tasnim Huq","orcid":"https://orcid.org/0000-0002-4622-8102"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Khandaker Tasnim Huq","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101832672","display_name":"Youngchul Kim","orcid":"https://orcid.org/0000-0002-2307-0330"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]},{"id":"https://openalex.org/I3019308854","display_name":"Moffitt Cancer Center","ror":"https://ror.org/01xf75524","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I3019308854"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Youngchul Kim","raw_affiliation_strings":["Moffit Cancer Center, Tampa, FL, 33612, USA","University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"Moffit Cancer Center, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I3019308854"]},{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017155873","display_name":"Xiangyun Liao","orcid":"https://orcid.org/0000-0002-1682-3939"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiangyun Liao","raw_affiliation_strings":["Texas A&M, College Station, TX, USA"],"affiliations":[{"raw_affiliation_string":"Texas A&M, College Station, TX, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100409024","display_name":"Xiaoming Liu","orcid":"https://orcid.org/0000-0001-8285-5528"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"XiaoMing Liu","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086275793","display_name":"Fahad Mansuri","orcid":"https://orcid.org/0000-0001-5904-1331"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fahad Mansuri","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004059838","display_name":"Lynn B. Martin","orcid":"https://orcid.org/0000-0002-5887-4937"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lynn B. Martin","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055691432","display_name":"Elizabeth M. Miller","orcid":"https://orcid.org/0000-0002-5046-380X"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elizabeth M. Miller","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014040778","display_name":"Ojas Natarajan","orcid":"https://orcid.org/0000-0001-7887-2640"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ojas Natarajan","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017147313","display_name":"Jinyong Pang","orcid":"https://orcid.org/0009-0009-4770-7330"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jinyong Pang","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103942642","display_name":"Francesca Prieto","orcid":null},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Francesca Prieto","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002271051","display_name":"Peter Radulovic","orcid":"https://orcid.org/0000-0003-0928-003X"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter W. Radulovic","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5096905419","display_name":"Vyoma Sheth","orcid":"https://orcid.org/0009-0004-3653-794X"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vyoma Sheth","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033840158","display_name":"Matthew Sumpter","orcid":"https://orcid.org/0000-0001-5854-9686"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Sumpter","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060828083","display_name":"Desirae Sutherland","orcid":null},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Desirae Sutherland","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012007523","display_name":"Nisha Vijayakumar","orcid":null},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nisha Vijayakumar","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075555324","display_name":"Rays H. Y. Jiang","orcid":"https://orcid.org/0000-0001-8982-4169"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rays H. Y. Jiang","raw_affiliation_strings":["University of South Florida, Tampa, FL, 33612, USA"],"affiliations":[{"raw_affiliation_string":"University of South Florida, Tampa, FL, 33612, USA","institution_ids":["https://openalex.org/I2613432"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":39,"corresponding_author_ids":["https://openalex.org/A5006341111"],"corresponding_institution_ids":["https://openalex.org/I2613432"],"apc_list":{"value":1350,"currency":"USD","value_usd":1350},"apc_paid":{"value":1350,"currency":"USD","value_usd":1350},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.12283901,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"9","issue":null,"first_page":"1478","last_page":"1478"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10582","display_name":"Ethics in Clinical Research","score":0.984499990940094,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9807000160217285,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/geospatial-analysis","display_name":"Geospatial analysis","score":0.8002089858055115},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.669894814491272},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.631757378578186},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.5711843967437744},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.4667520821094513},{"id":"https://openalex.org/keywords/discipline","display_name":"Discipline","score":0.46316632628440857},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.43326616287231445},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.17395812273025513},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14019045233726501},{"id":"https://openalex.org/keywords/sociology","display_name":"Sociology","score":0.12648889422416687},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.10821154713630676}],"concepts":[{"id":"https://openalex.org/C9770341","wikidata":"https://www.wikidata.org/wiki/Q1938983","display_name":"Geospatial analysis","level":2,"score":0.8002089858055115},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.669894814491272},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.631757378578186},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.5711843967437744},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.4667520821094513},{"id":"https://openalex.org/C8795937","wikidata":"https://www.wikidata.org/wiki/Q11862829","display_name":"Discipline","level":2,"score":0.46316632628440857},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43326616287231445},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.17395812273025513},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14019045233726501},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.12648889422416687},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.10821154713630676},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.0},{"id":"https://openalex.org/C36289849","wikidata":"https://www.wikidata.org/wiki/Q34749","display_name":"Social science","level":1,"score":0.0},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.12688/f1000research.26459.1","is_oa":true,"landing_page_url":"https://doi.org/10.12688/f1000research.26459.1","pdf_url":null,"source":{"id":"https://openalex.org/S4210239046","display_name":"F1000Research","issn_l":"2046-1402","issn":["2046-1402"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320357","host_organization_name":"Faculty of 1000","host_organization_lineage":["https://openalex.org/P4310320357"],"host_organization_lineage_names":["Faculty of 1000"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":"journal-article"},{"id":"pmh:oai:digitalcommons.usf.edu:geo_facpub-3299","is_oa":true,"landing_page_url":"https://digitalcommons.usf.edu/geo_facpub/2312","pdf_url":"https://digitalcommons.usf.edu/geo_facpub/2312","source":{"id":"https://openalex.org/S4377196272","display_name":"Digital Commons - University of South Florida (University of South Florida)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2613432","host_organization_name":"University of South Florida","host_organization_lineage":["https://openalex.org/I2613432"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"School of Geosciences Faculty and Staff Publications","raw_type":"article"}],"best_oa_location":{"id":"doi:10.12688/f1000research.26459.1","is_oa":true,"landing_page_url":"https://doi.org/10.12688/f1000research.26459.1","pdf_url":null,"source":{"id":"https://openalex.org/S4210239046","display_name":"F1000Research","issn_l":"2046-1402","issn":["2046-1402"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320357","host_organization_name":"Faculty of 1000","host_organization_lineage":["https://openalex.org/P4310320357"],"host_organization_lineage_names":["Faculty of 1000"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320310847","display_name":"University of South Florida","ror":"https://ror.org/032db5x82"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":48,"referenced_works":["https://openalex.org/W1230849293","https://openalex.org/W1601063618","https://openalex.org/W1831050183","https://openalex.org/W2024189200","https://openalex.org/W2032230795","https://openalex.org/W2034285706","https://openalex.org/W2055043387","https://openalex.org/W2056279562","https://openalex.org/W2102278586","https://openalex.org/W2122745924","https://openalex.org/W2124904833","https://openalex.org/W2131415145","https://openalex.org/W2136602574","https://openalex.org/W2142487553","https://openalex.org/W2144568881","https://openalex.org/W2149573313","https://openalex.org/W2157395790","https://openalex.org/W2170551349","https://openalex.org/W2282537990","https://openalex.org/W2313393927","https://openalex.org/W2320653209","https://openalex.org/W2401404581","https://openalex.org/W2537693456","https://openalex.org/W2544360569","https://openalex.org/W2556521897","https://openalex.org/W2573173004","https://openalex.org/W2593250910","https://openalex.org/W2766358903","https://openalex.org/W2767517408","https://openalex.org/W2794613307","https://openalex.org/W2884571619","https://openalex.org/W2892026841","https://openalex.org/W2899522056","https://openalex.org/W2914060238","https://openalex.org/W2953583829","https://openalex.org/W2954206569","https://openalex.org/W2963447910","https://openalex.org/W2964061133","https://openalex.org/W2964962118","https://openalex.org/W2990427812","https://openalex.org/W2993552674","https://openalex.org/W3007996344","https://openalex.org/W3102027041","https://openalex.org/W4232900961","https://openalex.org/W4247053599","https://openalex.org/W4399638148","https://openalex.org/W6629642197","https://openalex.org/W6869699453"],"related_works":["https://openalex.org/W4367313141","https://openalex.org/W4283374591","https://openalex.org/W2004086023","https://openalex.org/W2733999579","https://openalex.org/W2110217573","https://openalex.org/W2910751785","https://openalex.org/W4390100400","https://openalex.org/W4366547507","https://openalex.org/W4362512700","https://openalex.org/W2074396925"],"abstract_inverted_index":{"<ns3:p>Microbiome":[0],"data":[1,31,75,170],"are":[2],"undergoing":[3],"exponential":[4],"growth":[5],"powered":[6],"by":[7],"rapid":[8],"technological":[9],"advancement.":[10],"As":[11,152],"the":[12,29,115,120,123,140],"scope":[13],"and":[14,27,51,85,103,147,149,159,177,183],"depth":[15],"of":[16,59,100,125,142],"microbiome":[17,126,167],"research":[18,21,35,42],"increases,":[19],"cross-disciplinary":[20],"is":[22],"urgently":[23],"needed":[24],"for":[25,190],"interpreting":[26],"harnessing":[28],"unprecedented":[30],"output.":[32],"However,":[33],"conventional":[34],"settings":[36],"pose":[37],"challenges":[38,164],"to":[39,45,66,96,108,133,161,193],"much-needed":[40],"interdisciplinary":[41],"efforts":[43],"due":[44],"barriers":[46],"in":[47,87,139,165],"scientific":[48],"terminologies,":[49],"methodology":[50],"research-culture.":[52],"To":[53,113],"breach":[54],"these":[55],"barriers,":[56],"our":[57],"University":[58],"South":[60],"Florida":[61],"OneHealth":[62],"Codeathon":[63],"was":[64],"designed":[65],"be":[67,187],"an":[68,188],"interactive,":[69],"hands-on":[70],"event":[71],"that":[72],"solves":[73],"real-world":[74],"problems.":[76],"The":[77],"format":[78],"brought":[79],"together":[80],"students,":[81],"postdocs,":[82],"faculty,":[83],"researchers,":[84],"clinicians":[86],"a":[88,153],"uniquely":[89],"cross-disciplinary,":[90],"team-focused":[91],"setting.":[92],"Teams":[93],"were":[94],"formed":[95],"encourage":[97],"equitable":[98],"distribution":[99],"diverse":[101],"domain-experts":[102],"proficient":[104],"programmers,":[105],"with":[106],"beginners":[107],"experts":[109],"on":[110,122],"each":[111],"team.":[112],"unify":[114],"intellectual":[116],"framework,":[117],"we":[118],"set":[119],"focus":[121],"topics":[124],"interactions":[127],"at":[128],"different":[129],"scales":[130],"from":[131],"clinical":[132,145],"environmental":[134],"sciences,":[135],"leveraging":[136],"local":[137],"expertise":[138],"fields":[141],"genetics,":[143],"genomics,":[144],"data,":[146],"social":[148],"geospatial":[150,175],"sciences.":[151],"result,":[154],"teams":[155],"developed":[156],"working":[157],"methods":[158],"pipelines":[160],"face":[162],"major":[163],"current":[166],"research,":[168],"including":[169],"integration,":[171],"experimental":[172],"power":[173],"calculations,":[174],"mapping,":[176],"machine-learning":[178],"classifiers.":[179],"This":[180],"broad,":[181],"transdisciplinary":[182],"efficient":[184],"workflow":[185],"will":[186],"example":[189],"future":[191],"workshops":[192],"deliver":[194],"useful":[195],"data-science":[196],"products.</ns3:p>":[197]},"counts_by_year":[],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}