{"id":"https://openalex.org/W4248167110","doi":"https://doi.org/10.12688/f1000research.52350.1","title":"RNAmining: A machine learning stand-alone and web server tool for RNA coding potential prediction","display_name":"RNAmining: A machine learning stand-alone and web server tool for RNA coding potential prediction","publication_year":2021,"publication_date":"2021-04-26","ids":{"openalex":"https://openalex.org/W4248167110","doi":"https://doi.org/10.12688/f1000research.52350.1"},"language":"en","primary_location":{"id":"doi:10.12688/f1000research.52350.1","is_oa":true,"landing_page_url":"https://doi.org/10.12688/f1000research.52350.1","pdf_url":null,"source":{"id":"https://openalex.org/S4210239046","display_name":"F1000Research","issn_l":"2046-1402","issn":["2046-1402"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320357","host_organization_name":"Faculty of 1000","host_organization_lineage":["https://openalex.org/P4310320357"],"host_organization_lineage_names":["Faculty of 1000"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":"journal-article"},"type":"preprint","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.12688/f1000research.52350.1","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069317150","display_name":"Tha\u00eds A. R. Ramos","orcid":"https://orcid.org/0000-0002-6699-7742"},"institutions":[{"id":"https://openalex.org/I69737025","display_name":"University of Chile","ror":"https://ror.org/047gc3g35","country_code":"CL","type":"education","lineage":["https://openalex.org/I69737025"]},{"id":"https://openalex.org/I4210131520","display_name":"Advanced Center for Chronic Diseases","ror":"https://ror.org/036mwh061","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210131520"]},{"id":"https://openalex.org/I35046152","display_name":"Universidade Federal do Rio Grande do Norte","ror":"https://ror.org/04wn09761","country_code":"BR","type":"education","lineage":["https://openalex.org/I35046152"]},{"id":"https://openalex.org/I169045520","display_name":"Universidade Federal da Para\u00edba","ror":"https://ror.org/00p9vpz11","country_code":"BR","type":"education","lineage":["https://openalex.org/I169045520"]}],"countries":["BR","CL"],"is_corresponding":true,"raw_author_name":"Tha\u00eds A.R. Ramos","raw_affiliation_strings":["Advanced Center for Chronic Diseases (ACCDiS), Facultad de Ciencias Qu\u00edmicas y Farmac\u00e9uticas, Universidad de Chile, Santiago, Chile","Departamento de Inform\u00e1tica, Centro de Inform\u00e1tica, Universidade Federal da Para\u00edba, Jo\u00e3o Pessoa, Brazil","Programa de P\u00f3s-Gradua\u00e7\u00e3o em Bioinform\u00e1tica, Bioinformatics Multidisciplinary Environment (BioME), Instituto Metr\u00f3pole Digital, Universidade Federal do Rio Grande do Norte, Natal, Brazil"],"affiliations":[{"raw_affiliation_string":"Advanced Center for Chronic Diseases (ACCDiS), Facultad de Ciencias Qu\u00edmicas y Farmac\u00e9uticas, Universidad de Chile, Santiago, Chile","institution_ids":["https://openalex.org/I4210131520","https://openalex.org/I69737025"]},{"raw_affiliation_string":"Departamento de Inform\u00e1tica, Centro de Inform\u00e1tica, Universidade Federal da Para\u00edba, Jo\u00e3o Pessoa, Brazil","institution_ids":["https://openalex.org/I169045520"]},{"raw_affiliation_string":"Programa de P\u00f3s-Gradua\u00e7\u00e3o em Bioinform\u00e1tica, Bioinformatics Multidisciplinary Environment (BioME), Instituto Metr\u00f3pole Digital, Universidade Federal do Rio Grande do Norte, Natal, Brazil","institution_ids":["https://openalex.org/I35046152"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031758074","display_name":"Nilbson Galindo","orcid":"https://orcid.org/0000-0001-9305-6449"},"institutions":[{"id":"https://openalex.org/I169045520","display_name":"Universidade Federal da Para\u00edba","ror":"https://ror.org/00p9vpz11","country_code":"BR","type":"education","lineage":["https://openalex.org/I169045520"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Nilbson R.O. Galindo","raw_affiliation_strings":["Departamento de Inform\u00e1tica, Centro de Inform\u00e1tica, Universidade Federal da Para\u00edba, Jo\u00e3o Pessoa, Brazil"],"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica, Centro de Inform\u00e1tica, Universidade Federal da Para\u00edba, Jo\u00e3o Pessoa, Brazil","institution_ids":["https://openalex.org/I169045520"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030024244","display_name":"Ra\u00fal Arias\u2010Carrasco","orcid":"https://orcid.org/0000-0003-1698-9282"},"institutions":[{"id":"https://openalex.org/I4210131520","display_name":"Advanced Center for Chronic Diseases","ror":"https://ror.org/036mwh061","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210131520"]},{"id":"https://openalex.org/I69737025","display_name":"University of Chile","ror":"https://ror.org/047gc3g35","country_code":"CL","type":"education","lineage":["https://openalex.org/I69737025"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Ra\u00fal Arias-Carrasco","raw_affiliation_strings":["Advanced Center for Chronic Diseases (ACCDiS), Facultad de Ciencias Qu\u00edmicas y Farmac\u00e9uticas, Universidad de Chile, Santiago, Chile"],"affiliations":[{"raw_affiliation_string":"Advanced Center for Chronic Diseases (ACCDiS), Facultad de Ciencias Qu\u00edmicas y Farmac\u00e9uticas, Universidad de Chile, Santiago, Chile","institution_ids":["https://openalex.org/I4210131520","https://openalex.org/I69737025"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006198410","display_name":"Cec\u00edlia F. da Silva","orcid":null},"institutions":[{"id":"https://openalex.org/I169045520","display_name":"Universidade Federal da Para\u00edba","ror":"https://ror.org/00p9vpz11","country_code":"BR","type":"education","lineage":["https://openalex.org/I169045520"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Cec\u00edlia F. da Silva","raw_affiliation_strings":["Departamento de Inform\u00e1tica, Centro de Inform\u00e1tica, Universidade Federal da Para\u00edba, Jo\u00e3o Pessoa, Brazil"],"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica, Centro de Inform\u00e1tica, Universidade Federal da Para\u00edba, Jo\u00e3o Pessoa, Brazil","institution_ids":["https://openalex.org/I169045520"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013987962","display_name":"Vinicius Maracaja\u2010Coutinho","orcid":"https://orcid.org/0000-0002-8873-9381"},"institutions":[{"id":"https://openalex.org/I4210158946","display_name":"Centro Universit\u00e1rio de Jo\u00e3o Pessoa","ror":"https://ror.org/04pnqcx66","country_code":"BR","type":"education","lineage":["https://openalex.org/I4210158946"]},{"id":"https://openalex.org/I69737025","display_name":"University of Chile","ror":"https://ror.org/047gc3g35","country_code":"CL","type":"education","lineage":["https://openalex.org/I69737025"]},{"id":"https://openalex.org/I4210131520","display_name":"Advanced Center for Chronic Diseases","ror":"https://ror.org/036mwh061","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210131520"]},{"id":"https://openalex.org/I35046152","display_name":"Universidade Federal do Rio Grande do Norte","ror":"https://ror.org/04wn09761","country_code":"BR","type":"education","lineage":["https://openalex.org/I35046152"]}],"countries":["BR","CL"],"is_corresponding":false,"raw_author_name":"Vinicius Maracaja-Coutinho","raw_affiliation_strings":["Advanced Center for Chronic Diseases (ACCDiS), Facultad de Ciencias Qu\u00edmicas y Farmac\u00e9uticas, Universidad de Chile, Santiago, Chile","Instituto Vandique, Jo\u00e3o Pessoa, Brazil","Programa de P\u00f3s-Gradua\u00e7\u00e3o em Bioinform\u00e1tica, Bioinformatics Multidisciplinary Environment (BioME), Instituto Metr\u00f3pole Digital, Universidade Federal do Rio Grande do Norte, Natal, Brazil"],"affiliations":[{"raw_affiliation_string":"Advanced Center for Chronic Diseases (ACCDiS), Facultad de Ciencias Qu\u00edmicas y Farmac\u00e9uticas, Universidad de Chile, Santiago, Chile","institution_ids":["https://openalex.org/I4210131520","https://openalex.org/I69737025"]},{"raw_affiliation_string":"Instituto Vandique, Jo\u00e3o Pessoa, Brazil","institution_ids":["https://openalex.org/I4210158946"]},{"raw_affiliation_string":"Programa de P\u00f3s-Gradua\u00e7\u00e3o em Bioinform\u00e1tica, Bioinformatics Multidisciplinary Environment (BioME), Instituto Metr\u00f3pole Digital, Universidade Federal do Rio Grande do Norte, Natal, Brazil","institution_ids":["https://openalex.org/I35046152"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061306912","display_name":"Tha\u00eds G. do R\u00eago","orcid":"https://orcid.org/0000-0002-6608-4900"},"institutions":[{"id":"https://openalex.org/I35046152","display_name":"Universidade Federal do Rio Grande do Norte","ror":"https://ror.org/04wn09761","country_code":"BR","type":"education","lineage":["https://openalex.org/I35046152"]},{"id":"https://openalex.org/I169045520","display_name":"Universidade Federal da Para\u00edba","ror":"https://ror.org/00p9vpz11","country_code":"BR","type":"education","lineage":["https://openalex.org/I169045520"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Tha\u00eds G. do R\u00eago","raw_affiliation_strings":["Departamento de Inform\u00e1tica, Centro de Inform\u00e1tica, Universidade Federal da Para\u00edba, Jo\u00e3o Pessoa, Brazil","Programa de P\u00f3s-Gradua\u00e7\u00e3o em Bioinform\u00e1tica, Bioinformatics Multidisciplinary Environment (BioME), Instituto Metr\u00f3pole Digital, Universidade Federal do Rio Grande do Norte, Natal, Brazil"],"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica, Centro de Inform\u00e1tica, Universidade Federal da Para\u00edba, Jo\u00e3o Pessoa, Brazil","institution_ids":["https://openalex.org/I169045520"]},{"raw_affiliation_string":"Programa de P\u00f3s-Gradua\u00e7\u00e3o em Bioinform\u00e1tica, Bioinformatics Multidisciplinary Environment (BioME), Instituto Metr\u00f3pole Digital, Universidade Federal do Rio Grande do Norte, Natal, Brazil","institution_ids":["https://openalex.org/I35046152"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5069317150"],"corresponding_institution_ids":["https://openalex.org/I69737025","https://openalex.org/I4210131520","https://openalex.org/I35046152","https://openalex.org/I169045520"],"apc_list":{"value":1350,"currency":"USD","value_usd":1350},"apc_paid":{"value":1350,"currency":"USD","value_usd":1350},"fwci":0.53383796,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.55064435,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"10","issue":null,"first_page":"323","last_page":"323"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/open-peer-review","display_name":"Open peer review","score":0.8170415163040161},{"id":"https://openalex.org/keywords/plant-biology","display_name":"Plant biology","score":0.7216648459434509},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.5627449154853821},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46486717462539673},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.44652700424194336},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.43654578924179077},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.36755824089050293},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3471369445323944},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3469938635826111},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.3215688169002533},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.25762295722961426},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.1451835036277771},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.06728595495223999},{"id":"https://openalex.org/keywords/botany","display_name":"Botany","score":0.062350183725357056}],"concepts":[{"id":"https://openalex.org/C2983643791","wikidata":"https://www.wikidata.org/wiki/Q1999993","display_name":"Open peer review","level":3,"score":0.8170415163040161},{"id":"https://openalex.org/C2992936677","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Plant biology","level":2,"score":0.7216648459434509},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.5627449154853821},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46486717462539673},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44652700424194336},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.43654578924179077},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.36755824089050293},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3471369445323944},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3469938635826111},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.3215688169002533},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.25762295722961426},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.1451835036277771},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.06728595495223999},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.062350183725357056},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.12688/f1000research.52350.1","is_oa":true,"landing_page_url":"https://doi.org/10.12688/f1000research.52350.1","pdf_url":null,"source":{"id":"https://openalex.org/S4210239046","display_name":"F1000Research","issn_l":"2046-1402","issn":["2046-1402"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320357","host_organization_name":"Faculty of 1000","host_organization_lineage":["https://openalex.org/P4310320357"],"host_organization_lineage_names":["Faculty of 1000"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.12688/f1000research.52350.1","is_oa":true,"landing_page_url":"https://doi.org/10.12688/f1000research.52350.1","pdf_url":null,"source":{"id":"https://openalex.org/S4210239046","display_name":"F1000Research","issn_l":"2046-1402","issn":["2046-1402"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320357","host_organization_name":"Faculty of 1000","host_organization_lineage":["https://openalex.org/P4310320357"],"host_organization_lineage_names":["Faculty of 1000"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321091","display_name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","ror":"https://ror.org/00x0ma614"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1967102258","https://openalex.org/W1984471884","https://openalex.org/W2007203150","https://openalex.org/W2008945738","https://openalex.org/W2011657487","https://openalex.org/W2018811952","https://openalex.org/W2048194168","https://openalex.org/W2060515857","https://openalex.org/W2101234009","https://openalex.org/W2131293603","https://openalex.org/W2153635508","https://openalex.org/W2157009395","https://openalex.org/W2166810745","https://openalex.org/W2228304976","https://openalex.org/W2317878573","https://openalex.org/W2560643340","https://openalex.org/W2565865891","https://openalex.org/W2615786037","https://openalex.org/W2626443726","https://openalex.org/W2784666260","https://openalex.org/W2788592718","https://openalex.org/W3042325071","https://openalex.org/W3215869875","https://openalex.org/W4230183661","https://openalex.org/W6652004108","https://openalex.org/W6675354045","https://openalex.org/W6683407323","https://openalex.org/W6684438377","https://openalex.org/W6832027530","https://openalex.org/W6912669093"],"related_works":["https://openalex.org/W2248904208","https://openalex.org/W2240080159","https://openalex.org/W2624797522","https://openalex.org/W2247484637","https://openalex.org/W2078218631","https://openalex.org/W2061128535","https://openalex.org/W2734166346","https://openalex.org/W2100707893","https://openalex.org/W2619815702","https://openalex.org/W2236937313"],"abstract_inverted_index":{"<ns3:p>":[0],"Non-coding":[1],"RNAs":[2],"(ncRNAs)":[3],"are":[4],"important":[5],"players":[6],"in":[7,21,110,161],"the":[8,18,25,72,75,106,117,130,133,150,176],"cellular":[9],"regulation":[10],"of":[11,17,178],"organisms":[12,50],"from":[13,51,85,144],"different":[14,52],"kingdoms.":[15],"One":[16],"key":[19],"steps":[20],"ncRNAs":[22],"research":[23],"is":[24,181],"ability":[26],"to":[27,65,137,146],"distinguish":[28,66],"coding/non-coding":[29,82,91],"sequences.":[30],"We":[31],"applied":[32],"seven":[33],"machine":[34,118],"learning":[35,119],"algorithms":[36,120],"(Naive":[37],"Bayes,":[38],"SVM,":[39],"KNN,":[40],"Random":[41],"Forest,":[42],"XGBoost,":[43],"ANN":[44],"and":[45,60,68,100,127,166,168],"DL)":[46],"through":[47],"15":[48],"model":[49],"evolutionary":[53],"branches.":[54],"Then,":[55,90],"we":[56,80,101,112,128,153],"created":[57],"a":[58,103,155],"stand-alone":[59],"web":[61],"server":[62],"tool":[63],"(RNAmining)":[64],"coding":[67],"non-coding":[69],"sequences,":[70],"selecting":[71],"algorithm":[73,131],"with":[74,132,157],"best":[76,134],"performance":[77],"(XGBoost).":[78],"Firstly,":[79],"used":[81],"sequences":[83,92],"downloaded":[84],"Ensembl":[86],"(April":[87],"14th,":[88],"2020).":[89],"were":[93,122],"balanced,":[94],"had":[95],"their":[96],"tri-nucleotides":[97],"counts":[98],"analysed":[99],"performed":[102,123],"normalization":[104],"by":[105],"sequence":[107],"length.":[108],"Thus,":[109],"total":[111],"built":[113],"180":[114],"models.":[115],"All":[116],"tests":[121],"using":[124],"10-folds":[125],"cross-validation":[126],"selected":[129],"results":[135,170],"(XGBoost)":[136],"implement":[138],"at":[139,184],"RNAmining.":[140],"Best":[141],"F1-scores":[142],"ranged":[143],"97.56%":[145],"99.57%":[147],"depending":[148],"on":[149],"organism.":[151],"Moreover,":[152],"produced":[154],"benchmarking":[156],"other":[158],"tools":[159],"already":[160],"literature":[162],"(CPAT,":[163],"CPC2,":[164],"RNAcon":[165],"Transdecoder)":[167],"our":[169],"outperformed":[171],"them,":[172],"opening":[173],"opportunities":[174],"for":[175],"development":[177],"RNAmining,":[179],"which":[180],"freely":[182],"available":[183],"<ns3:ext-link":[185],"xmlns:ns4=\"http://www.w3.org/1999/xlink\"":[186],"ext-link-type=\"uri\"":[187],"ns4:href=\"https://rnamining.integrativebioinformatics.me/\">https://rnamining.integrativebioinformatics.me/</ns3:ext-link>":[188],".":[189],"</ns3:p>":[190]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}