{"id":"https://openalex.org/W2087026647","doi":"https://doi.org/10.12688/f1000research.3-50.v1","title":"PPI layouts: BioJS components for the display of\u00a0Protein-Protein Interactions","display_name":"PPI layouts: BioJS components for the display of\u00a0Protein-Protein Interactions","publication_year":2014,"publication_date":"2014-02-13","ids":{"openalex":"https://openalex.org/W2087026647","doi":"https://doi.org/10.12688/f1000research.3-50.v1","mag":"2087026647","pmid":"https://pubmed.ncbi.nlm.nih.gov/25075288"},"language":"en","primary_location":{"id":"doi:10.12688/f1000research.3-50.v1","is_oa":true,"landing_page_url":"https://doi.org/10.12688/f1000research.3-50.v1","pdf_url":"https://f1000research.com/articles/3-50/v1/pdf","source":{"id":"https://openalex.org/S4210239046","display_name":"F1000Research","issn_l":"2046-1402","issn":["2046-1402"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320357","host_organization_name":"Faculty of 1000","host_organization_lineage":["https://openalex.org/P4310320357"],"host_organization_lineage_names":["Faculty of 1000"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":"journal-article"},"type":"preprint","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://f1000research.com/articles/3-50/v1/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019704465","display_name":"Gustavo A Salazar","orcid":"https://orcid.org/0000-0001-9208-4966"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]}],"countries":["ZA"],"is_corresponding":true,"raw_author_name":"Gustavo A. Salazar","raw_affiliation_strings":["Computational Biology Group, University of Cape Town, Cape Town, South Africa"],"affiliations":[{"raw_affiliation_string":"Computational Biology Group, University of Cape Town, Cape Town, South Africa","institution_ids":["https://openalex.org/I157614274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033056936","display_name":"Ayton Meintjes","orcid":"https://orcid.org/0000-0001-5076-2941"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Ayton Meintjes","raw_affiliation_strings":["Computational Biology Group, University of Cape Town, Cape Town, South Africa"],"affiliations":[{"raw_affiliation_string":"Computational Biology Group, University of Cape Town, Cape Town, South Africa","institution_ids":["https://openalex.org/I157614274"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5080377820","display_name":"Nicola Mulder","orcid":"https://orcid.org/0000-0003-4905-0941"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Nicola Mulder","raw_affiliation_strings":["Computational Biology Group, University of Cape Town, Cape Town, South Africa"],"affiliations":[{"raw_affiliation_string":"Computational Biology Group, University of Cape Town, Cape Town, South Africa","institution_ids":["https://openalex.org/I157614274"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5019704465"],"corresponding_institution_ids":["https://openalex.org/I157614274"],"apc_list":{"value":1350,"currency":"USD","value_usd":1350},"apc_paid":{"value":1350,"currency":"USD","value_usd":1350},"fwci":2.0735,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.88936791,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"3","issue":null,"first_page":"50","last_page":"50"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9692999720573425,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9692999720573425,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9642999768257141,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9383000135421753,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4141857624053955},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3321138620376587}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4141857624053955},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3321138620376587}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.12688/f1000research.3-50.v1","is_oa":true,"landing_page_url":"https://doi.org/10.12688/f1000research.3-50.v1","pdf_url":"https://f1000research.com/articles/3-50/v1/pdf","source":{"id":"https://openalex.org/S4210239046","display_name":"F1000Research","issn_l":"2046-1402","issn":["2046-1402"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320357","host_organization_name":"Faculty of 1000","host_organization_lineage":["https://openalex.org/P4310320357"],"host_organization_lineage_names":["Faculty of 1000"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":"journal-article"},{"id":"pmid:25075288","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25075288","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":null},{"id":"pmh:oai:doaj.org/article:685cff63d1c14f1eba9abc4b2bf5625d","is_oa":true,"landing_page_url":"https://doaj.org/article/685cff63d1c14f1eba9abc4b2bf5625d","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"F1000Research, Vol 3 (2014)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:3080325","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4103490","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.12688/f1000research.3-50.v1","is_oa":true,"landing_page_url":"https://doi.org/10.12688/f1000research.3-50.v1","pdf_url":"https://f1000research.com/articles/3-50/v1/pdf","source":{"id":"https://openalex.org/S4210239046","display_name":"F1000Research","issn_l":"2046-1402","issn":["2046-1402"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320357","host_organization_name":"Faculty of 1000","host_organization_lineage":["https://openalex.org/P4310320357"],"host_organization_lineage_names":["Faculty of 1000"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"F1000Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320324164","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2087026647.pdf","grobid_xml":"https://content.openalex.org/works/W2087026647.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W2016958746","https://openalex.org/W2023098599","https://openalex.org/W2039799807","https://openalex.org/W2060460012","https://openalex.org/W2063857715","https://openalex.org/W2095867585","https://openalex.org/W2105924489","https://openalex.org/W2121015328","https://openalex.org/W2122863289","https://openalex.org/W2131347449","https://openalex.org/W2135197754","https://openalex.org/W2135415614","https://openalex.org/W2138906045","https://openalex.org/W2140635350","https://openalex.org/W2159675211","https://openalex.org/W2165253681","https://openalex.org/W2169333371","https://openalex.org/W2263713071"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2082860237","https://openalex.org/W1990804418","https://openalex.org/W2130076355","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W1641042124","https://openalex.org/W2013243191","https://openalex.org/W2151865869"],"abstract_inverted_index":{"http://github.com/biojs/biojs;":[0],"http://dx.doi.org/10.5281/zenodo.7753.":[1]},"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
