{"id":"https://openalex.org/W2237238703","doi":"https://doi.org/10.1186/s12918-015-0249-9","title":"Generalized logical model based on network topology to capture the dynamical trends of cellular signaling pathways","display_name":"Generalized logical model based on network topology to capture the dynamical trends of cellular signaling pathways","publication_year":2016,"publication_date":"2016-01-11","ids":{"openalex":"https://openalex.org/W2237238703","doi":"https://doi.org/10.1186/s12918-015-0249-9","mag":"2237238703","pmid":"https://pubmed.ncbi.nlm.nih.gov/26818802"},"language":"en","primary_location":{"id":"doi:10.1186/s12918-015-0249-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-015-0249-9","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-015-0249-9","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-015-0249-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101716232","display_name":"Fan Zhang","orcid":"https://orcid.org/0000-0001-8377-0235"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Fan Zhang","raw_affiliation_strings":["Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore 639798, Singapore. fzhang005@e.ntu.edu.sg","Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore, 639798, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore 639798, Singapore. fzhang005@e.ntu.edu.sg","institution_ids":[]},{"raw_affiliation_string":"Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore, 639798, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025722009","display_name":"Haoting Chen","orcid":"https://orcid.org/0000-0002-2728-8257"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Haoting Chen","raw_affiliation_strings":["Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore 639798, Singapore. chen0783@e.ntu.edu.sg","Department of Industrial Engineering and Operations Research, Columbia University, New York, NY 10027, USA. chen0783@e.ntu.edu.sg","Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore, 639798, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore 639798, Singapore. chen0783@e.ntu.edu.sg","institution_ids":[]},{"raw_affiliation_string":"Department of Industrial Engineering and Operations Research, Columbia University, New York, NY 10027, USA. chen0783@e.ntu.edu.sg","institution_ids":[]},{"raw_affiliation_string":"Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore, 639798, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063169050","display_name":"Li Na Zhao","orcid":"https://orcid.org/0000-0001-6552-0929"},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Li Na Zhao","raw_affiliation_strings":["Bioinformatics Institute, Agency for Science, Technology and Research, Singapore 138671, Singapore. zhao0139@e.ntu.edu.sg","Bioinformatics Institute, Agency for Science, Technology and Research, Singapore, 138671, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute, Agency for Science, Technology and Research, Singapore 138671, Singapore. zhao0139@e.ntu.edu.sg","institution_ids":[]},{"raw_affiliation_string":"Bioinformatics Institute, Agency for Science, Technology and Research, Singapore, 138671, Singapore","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I4210148498"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100387512","display_name":"Hui Liu","orcid":"https://orcid.org/0000-0001-7158-913X"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hui Liu","raw_affiliation_strings":["Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore 639798, Singapore. liuhui@ntu.edu.sg","Lab of Information Management, Changzhou University, Changzhou, Jiangsu 213164, China. liuhui@ntu.edu.sg","Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore, 639798, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore 639798, Singapore. liuhui@ntu.edu.sg","institution_ids":[]},{"raw_affiliation_string":"Lab of Information Management, Changzhou University, Changzhou, Jiangsu 213164, China. liuhui@ntu.edu.sg","institution_ids":[]},{"raw_affiliation_string":"Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore, 639798, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089548776","display_name":"Teresa M. Przytycka","orcid":"https://orcid.org/0000-0002-6261-277X"},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Teresa M. Przytycka","raw_affiliation_strings":["National Center for Biotechnology Information, NLM/NIH, Bethesda, MD 20894, USA. przytyck@ncbi.nlm.nih.gov","National Center for Biotechnology Information, NLM/NIH, Bethesda, MD, 20894, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, NLM/NIH, Bethesda, MD 20894, USA. przytyck@ncbi.nlm.nih.gov","institution_ids":[]},{"raw_affiliation_string":"National Center for Biotechnology Information, NLM/NIH, Bethesda, MD, 20894, USA","institution_ids":["https://openalex.org/I4210109390"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014529529","display_name":"Jie Zheng","orcid":"https://orcid.org/0000-0001-6774-9786"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Jie Zheng","raw_affiliation_strings":["Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore 639798, Singapore. zhengjie@ntu.edu.sg","Complexity Institute, Nanyang Technological University, Singapore 637723, Singapore. zhengjie@ntu.edu.sg","Genome Institute of Singapore, Agency for Science, Technology and Research, Singapore 138672, Singapore. zhengjie@ntu.edu.sg","Complexity Institute, Nanyang Technological University, Singapore, 637723, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Graduate Lab, School of Computer Engineering, Nanyang Technological University, Singapore 639798, Singapore. zhengjie@ntu.edu.sg","institution_ids":[]},{"raw_affiliation_string":"Complexity Institute, Nanyang Technological University, Singapore 637723, Singapore. zhengjie@ntu.edu.sg","institution_ids":[]},{"raw_affiliation_string":"Genome Institute of Singapore, Agency for Science, Technology and Research, Singapore 138672, Singapore. zhengjie@ntu.edu.sg","institution_ids":[]},{"raw_affiliation_string":"Complexity Institute, Nanyang Technological University, Singapore, 637723, Singapore","institution_ids":["https://openalex.org/I172675005"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5014529529"],"corresponding_institution_ids":["https://openalex.org/I172675005"],"apc_list":null,"apc_paid":null,"fwci":0.523,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.70623048,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"10","issue":"S1","first_page":"7","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.729653537273407},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.540957510471344},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5372452735900879},{"id":"https://openalex.org/keywords/modelling-biological-systems","display_name":"Modelling biological systems","score":0.4951299726963043},{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.44590839743614197},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4269729256629944},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.42577123641967773},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.36899861693382263},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.23117393255233765},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.17111271619796753}],"concepts":[{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.729653537273407},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.540957510471344},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5372452735900879},{"id":"https://openalex.org/C137866125","wikidata":"https://www.wikidata.org/wiki/Q4299308","display_name":"Modelling biological systems","level":3,"score":0.4951299726963043},{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.44590839743614197},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4269729256629944},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.42577123641967773},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.36899861693382263},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.23117393255233765},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.17111271619796753},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12918-015-0249-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-015-0249-9","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-015-0249-9","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:26818802","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26818802","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:dr.ntu.edu.sg:10356/81868","is_oa":true,"landing_page_url":"https://hdl.handle.net/10220/39714","pdf_url":"https://dr.ntu.edu.sg/bitstreams/3ee6bcb2-d30a-4085-bcbd-1f7d0213013b/download","source":{"id":"https://openalex.org/S4306402609","display_name":"DR-NTU (Nanyang Technological University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I172675005","host_organization_name":"Nanyang Technological University","host_organization_lineage":["https://openalex.org/I172675005"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4895646","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4895646","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12918-015-0249-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-015-0249-9","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-015-0249-9","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3604214910","display_name":null,"funder_award_id":"AcRF Tier 2","funder_id":"https://openalex.org/F4320320751","funder_display_name":"Ministry of Education - Singapore"},{"id":"https://openalex.org/G6854926366","display_name":null,"funder_award_id":"Tier 2","funder_id":"https://openalex.org/F4320320751","funder_display_name":"Ministry of Education - Singapore"},{"id":"https://openalex.org/G8000929236","display_name":null,"funder_award_id":"MOE2013-T2-1-079","funder_id":"https://openalex.org/F4320320751","funder_display_name":"Ministry of Education - Singapore"}],"funders":[{"id":"https://openalex.org/F4320306085","display_name":"U.S. Department of Health and Human Services","ror":"https://ror.org/033jnv181"},{"id":"https://openalex.org/F4320320751","display_name":"Ministry of Education - Singapore","ror":"https://ror.org/01kcva023"},{"id":"https://openalex.org/F4320320766","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302"},{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2237238703.pdf","grobid_xml":"https://content.openalex.org/works/W2237238703.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W58125149","https://openalex.org/W205856494","https://openalex.org/W1926696424","https://openalex.org/W1969442037","https://openalex.org/W1977198605","https://openalex.org/W1986177561","https://openalex.org/W1993346355","https://openalex.org/W2010391389","https://openalex.org/W2015401980","https://openalex.org/W2017218687","https://openalex.org/W2052549489","https://openalex.org/W2061019845","https://openalex.org/W2069728939","https://openalex.org/W2075941967","https://openalex.org/W2076883893","https://openalex.org/W2094445822","https://openalex.org/W2095433609","https://openalex.org/W2106454464","https://openalex.org/W2107208539","https://openalex.org/W2114206363","https://openalex.org/W2123183032","https://openalex.org/W2132935366","https://openalex.org/W2136977672","https://openalex.org/W2140662159","https://openalex.org/W2157573465","https://openalex.org/W2159482845","https://openalex.org/W2913647772"],"related_works":["https://openalex.org/W2158714033","https://openalex.org/W4210989272","https://openalex.org/W1975586684","https://openalex.org/W4206945140","https://openalex.org/W2063941210","https://openalex.org/W4386628104","https://openalex.org/W2127864418","https://openalex.org/W2947028852","https://openalex.org/W2598362101","https://openalex.org/W2212032968"],"abstract_inverted_index":{"The":[0],"proposed":[1],"simulation":[2],"tool":[3],"provides":[4],"a":[5,14],"valuable":[6],"resource":[7],"for":[8],"modeling":[9],"cellular":[10],"signaling":[11],"pathways":[12],"using":[13],"knowledge-based":[15],"method.":[16]},"counts_by_year":[{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1}],"updated_date":"2026-04-26T08:31:28.666265","created_date":"2025-10-10T00:00:00"}
