{"id":"https://openalex.org/W2157072814","doi":"https://doi.org/10.1186/2041-1480-5-50","title":"AISO: Annotation of Image Segments with Ontologies","display_name":"AISO: Annotation of Image Segments with Ontologies","publication_year":2014,"publication_date":"2014-12-01","ids":{"openalex":"https://openalex.org/W2157072814","doi":"https://doi.org/10.1186/2041-1480-5-50","mag":"2157072814","pmid":"https://pubmed.ncbi.nlm.nih.gov/25584184"},"language":"en","primary_location":{"id":"doi:10.1186/2041-1480-5-50","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-50","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-50","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-50","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022915926","display_name":"Nikhil Tej Lingutla","orcid":null},"institutions":[{"id":"https://openalex.org/I131249849","display_name":"Oregon State University","ror":"https://ror.org/00ysfqy60","country_code":"US","type":"education","lineage":["https://openalex.org/I131249849"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Nikhil Tej Lingutla","raw_affiliation_strings":["School of Electrical Engineering and Computer Science, Kelley Engineering Center, Oregon State University, Corvallis, OR 97331-2902 USA","School of Electrical Engineering and Computer Science, Kelley Engineering Center, Oregon State University, Corvallis, OR, 97331-2902, USA"],"affiliations":[{"raw_affiliation_string":"School of Electrical Engineering and Computer Science, Kelley Engineering Center, Oregon State University, Corvallis, OR 97331-2902 USA","institution_ids":[]},{"raw_affiliation_string":"School of Electrical Engineering and Computer Science, Kelley Engineering Center, Oregon State University, Corvallis, OR, 97331-2902, USA","institution_ids":["https://openalex.org/I131249849"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086541807","display_name":"Justin Preece","orcid":"https://orcid.org/0000-0001-5406-4905"},"institutions":[{"id":"https://openalex.org/I131249849","display_name":"Oregon State University","ror":"https://ror.org/00ysfqy60","country_code":"US","type":"education","lineage":["https://openalex.org/I131249849"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Justin Preece","raw_affiliation_strings":["Department of Botany and Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, OR 97331-2902 USA","Department of Botany and Plant Pathology, 2082 Cordley Hall, Oregon State University, Corvallis, OR, 97331-2902, USA"],"affiliations":[{"raw_affiliation_string":"Department of Botany and Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, OR 97331-2902 USA","institution_ids":["https://openalex.org/I131249849"]},{"raw_affiliation_string":"Department of Botany and Plant Pathology, 2082 Cordley Hall, Oregon State University, Corvallis, OR, 97331-2902, USA","institution_ids":["https://openalex.org/I131249849"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027742996","display_name":"Sini\u0161a Todorovi\u0107","orcid":"https://orcid.org/0000-0001-5793-5921"},"institutions":[{"id":"https://openalex.org/I131249849","display_name":"Oregon State University","ror":"https://ror.org/00ysfqy60","country_code":"US","type":"education","lineage":["https://openalex.org/I131249849"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sinisa Todorovic","raw_affiliation_strings":["School of Electrical Engineering and Computer Science, Kelley Engineering Center, Oregon State University, Corvallis, OR 97331-2902 USA","School of Electrical Engineering and Computer Science, Kelley Engineering Center, Oregon State University, Corvallis, OR, 97331-2902, USA"],"affiliations":[{"raw_affiliation_string":"School of Electrical Engineering and Computer Science, Kelley Engineering Center, Oregon State University, Corvallis, OR 97331-2902 USA","institution_ids":[]},{"raw_affiliation_string":"School of Electrical Engineering and Computer Science, Kelley Engineering Center, Oregon State University, Corvallis, OR, 97331-2902, USA","institution_ids":["https://openalex.org/I131249849"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056354760","display_name":"Laurel Cooper","orcid":"https://orcid.org/0000-0002-6379-8932"},"institutions":[{"id":"https://openalex.org/I131249849","display_name":"Oregon State University","ror":"https://ror.org/00ysfqy60","country_code":"US","type":"education","lineage":["https://openalex.org/I131249849"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Laurel Cooper","raw_affiliation_strings":["Department of Botany and Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, OR 97331-2902 USA","Department of Botany and Plant Pathology, 2082 Cordley Hall, Oregon State University, Corvallis, OR, 97331-2902, USA"],"affiliations":[{"raw_affiliation_string":"Department of Botany and Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, OR 97331-2902 USA","institution_ids":["https://openalex.org/I131249849"]},{"raw_affiliation_string":"Department of Botany and Plant Pathology, 2082 Cordley Hall, Oregon State University, Corvallis, OR, 97331-2902, USA","institution_ids":["https://openalex.org/I131249849"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110273813","display_name":"Laura Moore","orcid":null},"institutions":[{"id":"https://openalex.org/I131249849","display_name":"Oregon State University","ror":"https://ror.org/00ysfqy60","country_code":"US","type":"education","lineage":["https://openalex.org/I131249849"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Laura Moore","raw_affiliation_strings":["Department of Botany and Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, OR 97331-2902 USA","Department of Botany and Plant Pathology, 2082 Cordley Hall, Oregon State University, Corvallis, OR, 97331-2902, USA"],"affiliations":[{"raw_affiliation_string":"Department of Botany and Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, OR 97331-2902 USA","institution_ids":["https://openalex.org/I131249849"]},{"raw_affiliation_string":"Department of Botany and Plant Pathology, 2082 Cordley Hall, Oregon State University, Corvallis, OR, 97331-2902, USA","institution_ids":["https://openalex.org/I131249849"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049418039","display_name":"Pankaj Jaiswal","orcid":"https://orcid.org/0000-0002-1005-8383"},"institutions":[{"id":"https://openalex.org/I131249849","display_name":"Oregon State University","ror":"https://ror.org/00ysfqy60","country_code":"US","type":"education","lineage":["https://openalex.org/I131249849"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pankaj Jaiswal","raw_affiliation_strings":["Department of Botany and Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, OR 97331-2902 USA","Department of Botany and Plant Pathology, 2082 Cordley Hall, Oregon State University, Corvallis, OR, 97331-2902, USA"],"affiliations":[{"raw_affiliation_string":"Department of Botany and Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, OR 97331-2902 USA","institution_ids":["https://openalex.org/I131249849"]},{"raw_affiliation_string":"Department of Botany and Plant Pathology, 2082 Cordley Hall, Oregon State University, Corvallis, OR, 97331-2902, USA","institution_ids":["https://openalex.org/I131249849"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5022915926"],"corresponding_institution_ids":["https://openalex.org/I131249849"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":1.2834,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.79936512,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"5","issue":"1","first_page":"50","last_page":"50"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.970300018787384,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8378483057022095},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7732416391372681},{"id":"https://openalex.org/keywords/automatic-image-annotation","display_name":"Automatic image annotation","score":0.7240034937858582},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7176521420478821},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6150352358818054},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5873209834098816},{"id":"https://openalex.org/keywords/image-retrieval","display_name":"Image retrieval","score":0.5796404480934143},{"id":"https://openalex.org/keywords/vocabulary","display_name":"Vocabulary","score":0.5302096605300903},{"id":"https://openalex.org/keywords/digital-image","display_name":"Digital image","score":0.5085717439651489},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.48577025532722473},{"id":"https://openalex.org/keywords/controlled-vocabulary","display_name":"Controlled vocabulary","score":0.4293366074562073},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.34738773107528687},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3035584092140198},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2791484594345093},{"id":"https://openalex.org/keywords/image-processing","display_name":"Image processing","score":0.22687458992004395}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8378483057022095},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7732416391372681},{"id":"https://openalex.org/C199579030","wikidata":"https://www.wikidata.org/wiki/Q2851778","display_name":"Automatic image annotation","level":4,"score":0.7240034937858582},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7176521420478821},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6150352358818054},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5873209834098816},{"id":"https://openalex.org/C1667742","wikidata":"https://www.wikidata.org/wiki/Q10927554","display_name":"Image retrieval","level":3,"score":0.5796404480934143},{"id":"https://openalex.org/C2777601683","wikidata":"https://www.wikidata.org/wiki/Q6499736","display_name":"Vocabulary","level":2,"score":0.5302096605300903},{"id":"https://openalex.org/C42781572","wikidata":"https://www.wikidata.org/wiki/Q1250322","display_name":"Digital image","level":4,"score":0.5085717439651489},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.48577025532722473},{"id":"https://openalex.org/C110615152","wikidata":"https://www.wikidata.org/wiki/Q1469824","display_name":"Controlled vocabulary","level":2,"score":0.4293366074562073},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.34738773107528687},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3035584092140198},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2791484594345093},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.22687458992004395},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/2041-1480-5-50","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-50","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-50","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:25584184","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25584184","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4290088","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4290088","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/2041-1480-5-50","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-50","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-50","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5442145930","display_name":null,"funder_award_id":"0822201","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G813176230","display_name":null,"funder_award_id":"822201","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320311401","display_name":"Oregon State University","ror":"https://ror.org/00ysfqy60"},{"id":"https://openalex.org/F4320320865","display_name":"Dublin City University","ror":"https://ror.org/04a1a1e81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2157072814.pdf","grobid_xml":"https://content.openalex.org/works/W2157072814.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W111240979","https://openalex.org/W647259934","https://openalex.org/W1493072479","https://openalex.org/W1787135779","https://openalex.org/W1966011286","https://openalex.org/W1984296518","https://openalex.org/W2038546252","https://openalex.org/W2113142309","https://openalex.org/W2148084209","https://openalex.org/W2162170909","https://openalex.org/W2169551590"],"related_works":["https://openalex.org/W3177930984","https://openalex.org/W2052697133","https://openalex.org/W2076896210","https://openalex.org/W2384288472","https://openalex.org/W1539573266","https://openalex.org/W2093596879","https://openalex.org/W2376984068","https://openalex.org/W2201969175","https://openalex.org/W2747088704","https://openalex.org/W2586799187"],"abstract_inverted_index":{"AISO":[0],"enables":[1],"curators":[2],"and":[3,43],"researchers":[4],"to":[5],"annotate":[6],"digital":[7],"images":[8],"with":[9],"ontology":[10],"terms":[11],"in":[12,33],"a":[13],"manner":[14],"which":[15],"ensures":[16],"the":[17,22],"future":[18],"computational":[19],"value":[20],"of":[21],"annotated":[23],"images.":[24],"We":[25],"foresee":[26],"uses":[27],"for":[28],"such":[29],"data-encoded":[30],"image":[31],"annotations":[32],"biological":[34],"data":[35],"mining,":[36],"machine":[37],"learning,":[38],"predictive":[39],"annotation,":[40],"semantic":[41],"inference,":[42],"comparative":[44],"analyses.":[45]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
