{"id":"https://openalex.org/W1982012442","doi":"https://doi.org/10.1186/1471-2105-9-493","title":"EMAAS: An extensible grid-based Rich Internet Application for microarray data analysis and management","display_name":"EMAAS: An extensible grid-based Rich Internet Application for microarray data analysis and management","publication_year":2008,"publication_date":"2008-11-25","ids":{"openalex":"https://openalex.org/W1982012442","doi":"https://doi.org/10.1186/1471-2105-9-493","mag":"1982012442","pmid":"https://pubmed.ncbi.nlm.nih.gov/19032776"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-493","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-493","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-493","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-493","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082043302","display_name":"Geoffrey J. Barton","orcid":"https://orcid.org/0000-0002-9014-5355"},"institutions":[{"id":"https://openalex.org/I4210157240","display_name":"Institute of Structural and Molecular Biology","ror":"https://ror.org/05wsetc54","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I124357947","https://openalex.org/I4210157240","https://openalex.org/I45129253","https://openalex.org/I98259816"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"G Barton","raw_affiliation_strings":["Division of Molecular Biosciences, Faculty of Natural Sciences, Centre for Bioinformatics, Imperial College, London, UK. g.barton@imperial.ac.uk","Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Molecular Biosciences, Faculty of Natural Sciences, Centre for Bioinformatics, Imperial College, London, UK. g.barton@imperial.ac.uk","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK","institution_ids":["https://openalex.org/I4210157240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058151301","display_name":"James Abbott","orcid":"https://orcid.org/0000-0001-7701-4249"},"institutions":[{"id":"https://openalex.org/I4210157240","display_name":"Institute of Structural and Molecular Biology","ror":"https://ror.org/05wsetc54","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I124357947","https://openalex.org/I4210157240","https://openalex.org/I45129253","https://openalex.org/I98259816"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"J Abbott","raw_affiliation_strings":["Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, Biochemistry Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, Biochemistry Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK","institution_ids":["https://openalex.org/I4210157240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110824219","display_name":"N Chiba","orcid":null},"institutions":[{"id":"https://openalex.org/I2801748203","display_name":"Hammersmith Hospital","ror":"https://ror.org/05jg8yp15","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I153355300","https://openalex.org/I2801748203"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"N Chiba","raw_affiliation_strings":["MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","institution_ids":["https://openalex.org/I2801748203"]},{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK","institution_ids":["https://openalex.org/I2801748203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111566298","display_name":"DW Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"id":"https://openalex.org/I880747138","display_name":"Science Applications International Corporation (United States)","ror":"https://ror.org/00zv91802","country_code":"US","type":"company","lineage":["https://openalex.org/I880747138"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"DW Huang","raw_affiliation_strings":["Laboratory of Immunopathogenesis and Bioinformatics, Clinical Services Program, SAIC-Frederick Inc., National Cancer Institute at Frederick, Frederick, MD, 21702, USA","Laboratory of Immunopathogenesis and Bioinformatics, Clinical Services Program, SAIC-Frederick Inc., National Cancer Institute at Frederick, Frederick, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Immunopathogenesis and Bioinformatics, Clinical Services Program, SAIC-Frederick Inc., National Cancer Institute at Frederick, Frederick, MD, 21702, USA","institution_ids":["https://openalex.org/I880747138","https://openalex.org/I4210140884"]},{"raw_affiliation_string":"Laboratory of Immunopathogenesis and Bioinformatics, Clinical Services Program, SAIC-Frederick Inc., National Cancer Institute at Frederick, Frederick, USA","institution_ids":["https://openalex.org/I880747138","https://openalex.org/I4210140884"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101896284","display_name":"Yunfeng Huang","orcid":"https://orcid.org/0000-0001-7147-3938"},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Y Huang","raw_affiliation_strings":["London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","London e-science Centre, Department of Computing, Faculty of Engineering, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, London, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044158430","display_name":"Marko Krznari\u0107","orcid":"https://orcid.org/0000-0001-6776-1136"},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"M Krznaric","raw_affiliation_strings":["London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","London e-science Centre, Department of Computing, Faculty of Engineering, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, London, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063824204","display_name":"J Mack-Smith","orcid":null},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"J Mack-Smith","raw_affiliation_strings":["London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","London e-science Centre, Department of Computing, Faculty of Engineering, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, London, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089467311","display_name":"A. Saleem","orcid":"https://orcid.org/0000-0001-6881-4893"},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"A Saleem","raw_affiliation_strings":["London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","London e-science Centre, Department of Computing, Faculty of Engineering, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, London, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108398910","display_name":"BT Sherman","orcid":null},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"id":"https://openalex.org/I880747138","display_name":"Science Applications International Corporation (United States)","ror":"https://ror.org/00zv91802","country_code":"US","type":"company","lineage":["https://openalex.org/I880747138"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"BT Sherman","raw_affiliation_strings":["Laboratory of Immunopathogenesis and Bioinformatics, Clinical Services Program, SAIC-Frederick Inc., National Cancer Institute at Frederick, Frederick, MD, 21702, USA","Laboratory of Immunopathogenesis and Bioinformatics, Clinical Services Program, SAIC-Frederick Inc., National Cancer Institute at Frederick, Frederick, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Immunopathogenesis and Bioinformatics, Clinical Services Program, SAIC-Frederick Inc., National Cancer Institute at Frederick, Frederick, MD, 21702, USA","institution_ids":["https://openalex.org/I880747138","https://openalex.org/I4210140884"]},{"raw_affiliation_string":"Laboratory of Immunopathogenesis and Bioinformatics, Clinical Services Program, SAIC-Frederick Inc., National Cancer Institute at Frederick, Frederick, USA","institution_ids":["https://openalex.org/I880747138","https://openalex.org/I4210140884"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056223752","display_name":"Brijesh K. Tiwari","orcid":"https://orcid.org/0000-0002-4834-6831"},"institutions":[{"id":"https://openalex.org/I2801748203","display_name":"Hammersmith Hospital","ror":"https://ror.org/05jg8yp15","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I153355300","https://openalex.org/I2801748203"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"B Tiwari","raw_affiliation_strings":["MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","institution_ids":["https://openalex.org/I2801748203"]},{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK","institution_ids":["https://openalex.org/I2801748203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067888810","display_name":"Christopher Tomlinson","orcid":"https://orcid.org/0000-0002-8634-6111"},"institutions":[{"id":"https://openalex.org/I2801748203","display_name":"Hammersmith Hospital","ror":"https://ror.org/05jg8yp15","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I153355300","https://openalex.org/I2801748203"]},{"id":"https://openalex.org/I4210157240","display_name":"Institute of Structural and Molecular Biology","ror":"https://ror.org/05wsetc54","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I124357947","https://openalex.org/I4210157240","https://openalex.org/I45129253","https://openalex.org/I98259816"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"C Tomlinson","raw_affiliation_strings":["Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, Biochemistry Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK","MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, Biochemistry Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","institution_ids":["https://openalex.org/I2801748203"]},{"raw_affiliation_string":"Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK","institution_ids":["https://openalex.org/I4210157240"]},{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK","institution_ids":["https://openalex.org/I2801748203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041822939","display_name":"Timothy J. Aitman","orcid":"https://orcid.org/0000-0002-7875-4502"},"institutions":[{"id":"https://openalex.org/I2801748203","display_name":"Hammersmith Hospital","ror":"https://ror.org/05jg8yp15","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I153355300","https://openalex.org/I2801748203"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"T Aitman","raw_affiliation_strings":["MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","institution_ids":["https://openalex.org/I2801748203"]},{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK","institution_ids":["https://openalex.org/I2801748203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057515451","display_name":"James Darlington","orcid":null},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"J Darlington","raw_affiliation_strings":["London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","London e-science Centre, Department of Computing, Faculty of Engineering, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, William Penney Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"London e-science Centre, Department of Computing, Faculty of Engineering, London, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110494456","display_name":"Laurence Gam\u00e9","orcid":"https://orcid.org/0000-0001-9506-0388"},"institutions":[{"id":"https://openalex.org/I2801748203","display_name":"Hammersmith Hospital","ror":"https://ror.org/05jg8yp15","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I153355300","https://openalex.org/I2801748203"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"L Game","raw_affiliation_strings":["MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, Campus Imperial College London, Du Cane Road, London, W12 0NN, UK","institution_ids":["https://openalex.org/I2801748203"]},{"raw_affiliation_string":"MRC Clinical Sciences Centre, Hammersmith Hospital, London, UK","institution_ids":["https://openalex.org/I2801748203"]}]},{"author_position":"middle","author":{"id":null,"display_name":"MJE Sternberg","orcid":null},"institutions":[{"id":"https://openalex.org/I4210157240","display_name":"Institute of Structural and Molecular Biology","ror":"https://ror.org/05wsetc54","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I124357947","https://openalex.org/I4210157240","https://openalex.org/I45129253","https://openalex.org/I98259816"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"MJE Sternberg","raw_affiliation_strings":["Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, Biochemistry Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, Biochemistry Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK","institution_ids":["https://openalex.org/I4210157240"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076906622","display_name":"SA Butcher","orcid":null},"institutions":[{"id":"https://openalex.org/I4210157240","display_name":"Institute of Structural and Molecular Biology","ror":"https://ror.org/05wsetc54","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I124357947","https://openalex.org/I4210157240","https://openalex.org/I45129253","https://openalex.org/I98259816"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"SA Butcher","raw_affiliation_strings":["Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, Biochemistry Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, Biochemistry Building, South Kensington Campus, Imperial College, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Centre for Bioinformatics, Division of Molecular Biosciences, Faculty of Natural Sciences, London, UK","institution_ids":["https://openalex.org/I4210157240"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":16,"corresponding_author_ids":["https://openalex.org/A5076906622"],"corresponding_institution_ids":["https://openalex.org/I4210157240","https://openalex.org/I47508984"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.9815,"has_fulltext":true,"cited_by_count":15,"citation_normalized_percentile":{"value":0.74021838,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"9","issue":"1","first_page":"493","last_page":"493"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9434999823570251,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9434999823570251,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.017100000753998756,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.004399999976158142,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.746380627155304},{"id":"https://openalex.org/keywords/microarray-databases","display_name":"Microarray databases","score":0.6751664876937866},{"id":"https://openalex.org/keywords/bioconductor","display_name":"Bioconductor","score":0.6673240661621094},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.4940200448036194},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.45111918449401855},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4411187767982483},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4318317174911499},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.3755391836166382},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3319892883300781},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.26406949758529663}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.746380627155304},{"id":"https://openalex.org/C548314002","wikidata":"https://www.wikidata.org/wiki/Q6839218","display_name":"Microarray databases","level":5,"score":0.6751664876937866},{"id":"https://openalex.org/C2779694297","wikidata":"https://www.wikidata.org/wiki/Q2888953","display_name":"Bioconductor","level":3,"score":0.6673240661621094},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.4940200448036194},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.45111918449401855},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4411187767982483},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4318317174911499},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.3755391836166382},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3319892883300781},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.26406949758529663},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-9-493","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-493","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-493","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19032776","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19032776","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pure.ed.ac.uk:openaire/bba73968-ce79-4607-a0e6-12d6a4f24655","is_oa":true,"landing_page_url":"https://www.research.ed.ac.uk/en/publications/bba73968-ce79-4607-a0e6-12d6a4f24655","pdf_url":null,"source":{"id":"https://openalex.org/S4406922455","display_name":"Edinburgh Research Explorer","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Barton, G, Abbott, J, Chiba, N, Huang, D W, Huang, Y, Krznaric, M, Mack-Smith, J, Saleem, A, Sherman, B T, Tiwari, B, Tomlinson, C, Aitman, T, Darlington, J, Game, L, Sternberg, M J E & Butcher, S A 2008, 'EMAAS : an extensible grid-based rich internet application for microarray data analysis and management', BMC Bioinformatics, vol. 9, pp. 493. https://doi.org/10.1186/1471-2105-9-493","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:d2946d8c6a414e7aa7926c9a14bff84a","is_oa":false,"landing_page_url":"https://doaj.org/article/d2946d8c6a414e7aa7926c9a14bff84a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 9, Iss 1, p 493 (2008)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2615452","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2615452","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.ed.ac.uk:publications/bba73968-ce79-4607-a0e6-12d6a4f24655","is_oa":true,"landing_page_url":"https://www.research.ed.ac.uk/portal/en/publications/emaas(bba73968-ce79-4607-a0e6-12d6a4f24655).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400321","display_name":"Edinburgh Research Explorer (University of Edinburgh)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I98677209","host_organization_name":"University of Edinburgh","host_organization_lineage":["https://openalex.org/I98677209"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-493","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-493","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-493","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.44999998807907104,"display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"},{"id":"https://openalex.org/F4320337666","display_name":"David Geffen School of Medicine, University of California, Los Angeles","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1982012442.pdf","grobid_xml":"https://content.openalex.org/works/W1982012442.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W45534775","https://openalex.org/W1533335653","https://openalex.org/W1546952499","https://openalex.org/W1868489439","https://openalex.org/W1977859620","https://openalex.org/W1985098050","https://openalex.org/W2020541351","https://openalex.org/W2101177856","https://openalex.org/W2117259632","https://openalex.org/W2126976614","https://openalex.org/W2130383124","https://openalex.org/W2131089714","https://openalex.org/W2137653635","https://openalex.org/W2143129697","https://openalex.org/W2145825942","https://openalex.org/W2146508165","https://openalex.org/W2151253278","https://openalex.org/W2160697532","https://openalex.org/W2162871532","https://openalex.org/W2167361714","https://openalex.org/W2170989872","https://openalex.org/W2582743722","https://openalex.org/W4255852734"],"related_works":["https://openalex.org/W2032717553","https://openalex.org/W2943416042","https://openalex.org/W2961215453","https://openalex.org/W3202845816","https://openalex.org/W2160097678","https://openalex.org/W2528376594","https://openalex.org/W2005263238","https://openalex.org/W142111944","https://openalex.org/W2149532639","https://openalex.org/W2594878638"],"abstract_inverted_index":{"BACKGROUND:":[0],"Microarray":[1],"experimentation":[2],"requires":[3],"the":[4,13,21,29,51,113,155,185,196,216,224,236,243,263],"application":[5,83],"of":[6,15,31,115,187,203,255],"complex":[7],"analysis":[8,69,165,204,254,287,307],"methods":[9],"as":[10,12],"well":[11],"use":[14,173],"non-trivial":[16],"computer":[17],"technologies":[18],"to":[19,47,60,89,102,118,126,138,145,149,157,162,172,181,267,279,302,311,318],"manage":[20],"resultant":[22],"large":[23,321],"data":[24,37,68,94,141,164,245,284,324],"sets.":[25],"This,":[26],"together":[27],"with":[28,50,99,314,320],"proliferation":[30],"tools":[32,101,310],"and":[33,70,96,108,122,153,161,190,208,219,242,249,258,262,272,281,286,300,309,317],"techniques":[34],"for":[35,43,66,92,269],"microarray":[36,67,93,120,140,244,271,283],"analysis,":[38,97],"makes":[39],"it":[40],"very":[41],"challenging":[42],"a":[44,62,79,169,290],"laboratory":[45],"scientist":[46],"keep":[48],"up-to-date":[49,90],"latest":[52],"developments":[53],"in":[54,184,323],"this":[55],"field.":[56],"Our":[57],"aim":[58],"was":[59],"develop":[61],"distributed":[63,116,233],"e-support":[64],"system":[65,111,264,296],"management.":[71],"RESULTS:":[72],"EMAAS":[73,134,251,276],"(Extensible":[74],"MicroArray":[75],"Analysis":[76],"System)":[77],"is":[78,265,298],"multi-user":[80],"rich":[81],"internet":[82],"(RIA)":[84],"providing":[85],"simple,":[86],"robust":[87],"access":[88,125],"resources":[91,127,234],"storage":[95],"combined":[98],"integrated":[100,214],"optimise":[103],"real":[104],"time":[105],"user":[106],"support":[107,180],"training.":[109],"The":[110,133,295],"leverages":[112],"power":[114],"computing":[117],"perform":[119,158,282],"analyses,":[121,160],"provides":[123],"seamless":[124],"located":[128],"at":[129],"various":[130],"remote":[131],"facilities.":[132],"framework":[135],"allows":[136],"users":[137,182,278],"import":[139],"from":[142],"several":[143],"sources":[144],"an":[146],"underlying":[147],"database,":[148],"pre-process,":[150],"quality":[151],"assess":[152],"analyse":[154],"data,":[156],"functional":[159,237],"track":[163,280],"steps,":[166],"all":[167],"through":[168,223,289],"single":[170,291],"easy":[171],"web":[174,197,293],"portal.":[175],"This":[176],"interface":[177],"offers":[178],"distance":[179],"both":[183],"form":[186],"video":[188],"tutorials":[189],"via":[191],"live":[192],"screen":[193],"feeds":[194],"using":[195],"conferencing":[198],"tool":[199,239],"EVO.":[200],"A":[201],"number":[202],"packages,":[205],"including":[206],"R-Bioconductor":[207],"Affymetrix":[209,256],"Power":[210],"Tools":[211],"have":[212],"been":[213],"on":[215,228],"server":[217],"side":[218],"are":[220],"available":[221],"programmatically":[222],"Postgres-PLR":[225],"library":[226],"or":[227],"grid":[229],"compute":[230],"clusters.":[231],"Integrated":[232],"include":[235],"annotation":[238],"DAVID,":[240],"GeneCards":[241],"repositories":[246],"GEO,":[247],"CELSIUS":[248],"MiMiR.":[250],"currently":[252],"supports":[253],"3'":[257],"Exon":[259],"expression":[260],"arrays,":[261],"extensible":[266],"cater":[268],"other":[270],"transcriptomic":[273],"platforms.":[274],"CONCLUSION:":[275],"enables":[277],"management":[285],"tasks":[288],"easy-to-use":[292],"application.":[294],"architecture":[297],"flexible":[299],"scalable":[301],"allow":[303],"new":[304],"array":[305],"types,":[306],"algorithms":[308],"be":[312],"added":[313],"relative":[315],"ease":[316],"cope":[319],"increases":[322],"volume.":[325]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":2}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
