{"id":"https://openalex.org/W2134386780","doi":"https://doi.org/10.1186/1471-2105-15-s14-s7","title":"Community-driven development for computational biology at Sprints, Hackathons and Codefests","display_name":"Community-driven development for computational biology at Sprints, Hackathons and Codefests","publication_year":2014,"publication_date":"2014-11-27","ids":{"openalex":"https://openalex.org/W2134386780","doi":"https://doi.org/10.1186/1471-2105-15-s14-s7","mag":"2134386780","pmid":"https://pubmed.ncbi.nlm.nih.gov/25472764"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-15-s14-s7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-s14-s7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-S14-S7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-S14-S7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089261582","display_name":"Steffen M\u00f6ller","orcid":"https://orcid.org/0000-0002-7187-4683"},"institutions":[{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Steffen M\u00f6ller","raw_affiliation_strings":["Debian Project, UK","University of L\u00fcbeck, Department of Dermatology, Germany"],"affiliations":[{"raw_affiliation_string":"Debian Project, UK","institution_ids":[]},{"raw_affiliation_string":"University of L\u00fcbeck, Department of Dermatology, Germany","institution_ids":["https://openalex.org/I9341345"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006951727","display_name":"Enis Afgan","orcid":"https://orcid.org/0000-0003-0922-6711"},"institutions":[{"id":"https://openalex.org/I347366330","display_name":"Melbourne Bioinformatics","ror":"https://ror.org/05gkzhv48","country_code":"AU","type":"education","lineage":["https://openalex.org/I347366330"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I4210123216","display_name":"Rudjer Boskovic Institute","ror":"https://ror.org/02mw21745","country_code":"HR","type":"facility","lineage":["https://openalex.org/I4210123216"]}],"countries":["AU","HR"],"is_corresponding":false,"raw_author_name":"Enis Afgan","raw_affiliation_strings":["Center for Computing and Informatics, Ru\u0111er Bo\u0161kovi\u0107 Institute (RBI), Croatia","VLSCI Life Sciences Computation Centre, University of Melbourne, Australia"],"affiliations":[{"raw_affiliation_string":"Center for Computing and Informatics, Ru\u0111er Bo\u0161kovi\u0107 Institute (RBI), Croatia","institution_ids":["https://openalex.org/I4210123216"]},{"raw_affiliation_string":"VLSCI Life Sciences Computation Centre, University of Melbourne, Australia","institution_ids":["https://openalex.org/I347366330","https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037128636","display_name":"Michael Banck","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael Banck","raw_affiliation_strings":["Debian Project, UK"],"affiliations":[{"raw_affiliation_string":"Debian Project, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034654303","display_name":"Raoul J.P. Bonnal","orcid":"https://orcid.org/0000-0002-2123-6536"},"institutions":[{"id":"https://openalex.org/I4210160365","display_name":"Istituto Nazionale Genetica Molecolare","ror":"https://ror.org/05rb1q636","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210160365"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Raoul JP Bonnal","raw_affiliation_strings":["Istituto Nazionale Genetica Molecolare \"Romeo ed Enrica Invernizzi, Milano, Italy"],"affiliations":[{"raw_affiliation_string":"Istituto Nazionale Genetica Molecolare \"Romeo ed Enrica Invernizzi, Milano, Italy","institution_ids":["https://openalex.org/I4210160365"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060841909","display_name":"Tim Booth","orcid":"https://orcid.org/0000-0003-2470-9519"},"institutions":[{"id":"https://openalex.org/I4210092773","display_name":"UK Centre for Ecology & Hydrology","ror":"https://ror.org/00pggkr55","country_code":"GB","type":"funder","lineage":["https://openalex.org/I4210092773"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Timothy Booth","raw_affiliation_strings":["NERC Centre for Ecology and Hydrology, Wallingford, UK"],"affiliations":[{"raw_affiliation_string":"NERC Centre for Ecology and Hydrology, Wallingford, UK","institution_ids":["https://openalex.org/I4210092773"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051693563","display_name":"John Chilton","orcid":"https://orcid.org/0000-0002-6794-0756"},"institutions":[{"id":"https://openalex.org/I35765314","display_name":"Pittsburgh Supercomputing Center","ror":"https://ror.org/04tac1482","country_code":"US","type":"facility","lineage":["https://openalex.org/I35765314"]},{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Chilton","raw_affiliation_strings":["University of Minnesota Supercomputing Institute, USA"],"affiliations":[{"raw_affiliation_string":"University of Minnesota Supercomputing Institute, USA","institution_ids":["https://openalex.org/I35765314","https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013282022","display_name":"Peter Cock","orcid":"https://orcid.org/0000-0001-9513-9993"},"institutions":[{"id":"https://openalex.org/I15477984","display_name":"James Hutton Institute","ror":"https://ror.org/03rzp5127","country_code":"GB","type":"funder","lineage":["https://openalex.org/I15477984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Peter JA Cock","raw_affiliation_strings":["The James Hutton Institute, UK"],"affiliations":[{"raw_affiliation_string":"The James Hutton Institute, UK","institution_ids":["https://openalex.org/I15477984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040886993","display_name":"Markus Gumbel","orcid":"https://orcid.org/0000-0001-7657-9678"},"institutions":[{"id":"https://openalex.org/I112756935","display_name":"Mannheim University of Applied Sciences","ror":"https://ror.org/04p61dj41","country_code":"DE","type":"education","lineage":["https://openalex.org/I112756935"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Markus Gumbel","raw_affiliation_strings":["Mannheim University of Applied Sciences, Germany"],"affiliations":[{"raw_affiliation_string":"Mannheim University of Applied Sciences, Germany","institution_ids":["https://openalex.org/I112756935"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031007073","display_name":"Nomi L. Harris","orcid":"https://orcid.org/0000-0001-6315-3707"},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nomi Harris","raw_affiliation_strings":["Lawrence Berkeley National Laboratory, Berkeley, CA, USA"],"affiliations":[{"raw_affiliation_string":"Lawrence Berkeley National Laboratory, Berkeley, CA, USA","institution_ids":["https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084126128","display_name":"Richard Holland","orcid":"https://orcid.org/0000-0001-5364-1889"},"institutions":[{"id":"https://openalex.org/I4210144823","display_name":"Central Alliance (United Kingdom)","ror":"https://ror.org/03e150v94","country_code":"GB","type":"company","lineage":["https://openalex.org/I4210144823"]},{"id":"https://openalex.org/I4210118837","display_name":"ID Genomics (United States)","ror":"https://ror.org/02d77hg59","country_code":"US","type":"company","lineage":["https://openalex.org/I4210118837"]}],"countries":["GB","US"],"is_corresponding":false,"raw_author_name":"Richard Holland","raw_affiliation_strings":["Eagle Genomics Ltd, Wakefield, MA, USA","now at Pistoia Alliance, Wakefield, MA, USA"],"affiliations":[{"raw_affiliation_string":"Eagle Genomics Ltd, Wakefield, MA, USA","institution_ids":["https://openalex.org/I4210118837"]},{"raw_affiliation_string":"now at Pistoia Alliance, Wakefield, MA, USA","institution_ids":["https://openalex.org/I4210144823"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007975575","display_name":"Mat\u00fa\u0161 Kala\u0161","orcid":"https://orcid.org/0000-0002-1509-4981"},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Mat\u00fa\u0161 Kala\u0161","raw_affiliation_strings":["Computational Biology Unit and Department of Informatics, University of Bergen, Norway"],"affiliations":[{"raw_affiliation_string":"Computational Biology Unit and Department of Informatics, University of Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048342687","display_name":"L\u00e1szl\u00f3 Kaj\u00e1n","orcid":"https://orcid.org/0000-0001-8624-5970"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"L\u00e1szl\u00f3 Kaj\u00e1n","raw_affiliation_strings":["Debian Project, UK","TU Munich, Department of Bioinformatics and Computational Biology, Germany"],"affiliations":[{"raw_affiliation_string":"Debian Project, UK","institution_ids":[]},{"raw_affiliation_string":"TU Munich, Department of Bioinformatics and Computational Biology, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079136760","display_name":"Eri Kibukawa","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Eri Kibukawa","raw_affiliation_strings":["Illumina Inc., Japan"],"affiliations":[{"raw_affiliation_string":"Illumina Inc., Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106461391","display_name":"David R Powel","orcid":null},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I347366330","display_name":"Melbourne Bioinformatics","ror":"https://ror.org/05gkzhv48","country_code":"AU","type":"education","lineage":["https://openalex.org/I347366330"]}],"countries":["AU","DE"],"is_corresponding":false,"raw_author_name":"David R Powel","raw_affiliation_strings":["Monash University, Victorian Bioinformatics Consortium, Australia","TU Munich, Department of Bioinformatics and Computational Biology, Germany"],"affiliations":[{"raw_affiliation_string":"Monash University, Victorian Bioinformatics Consortium, Australia","institution_ids":["https://openalex.org/I347366330","https://openalex.org/I56590836"]},{"raw_affiliation_string":"TU Munich, Department of Bioinformatics and Computational Biology, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028085028","display_name":"Pjotr Prins","orcid":"https://orcid.org/0000-0002-8021-9162"},"institutions":[{"id":"https://openalex.org/I3018483916","display_name":"University Medical Center Utrecht","ror":"https://ror.org/0575yy874","country_code":"NL","type":"funder","lineage":["https://openalex.org/I3018483916"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Pjotr Prins","raw_affiliation_strings":["Department of Medical Genetics, Institute for Molecular Medicine, University Medical Centre Utrecht, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Medical Genetics, Institute for Molecular Medicine, University Medical Centre Utrecht, The Netherlands","institution_ids":["https://openalex.org/I3018483916"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109269755","display_name":"Jacqueline Quinn","orcid":null},"institutions":[{"id":"https://openalex.org/I1286353243","display_name":"Autodesk (United States)","ror":"https://ror.org/00pkt4594","country_code":"US","type":"company","lineage":["https://openalex.org/I1286353243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jacqueline Quinn","raw_affiliation_strings":["Autodesk, Inc., USA"],"affiliations":[{"raw_affiliation_string":"Autodesk, Inc., USA","institution_ids":["https://openalex.org/I1286353243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083778633","display_name":"Olivier Sallou","orcid":"https://orcid.org/0000-0003-3561-5657"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivier Sallou","raw_affiliation_strings":["Debian Project, UK","University of Rennes, INRIA/Irisa, France"],"affiliations":[{"raw_affiliation_string":"Debian Project, UK","institution_ids":[]},{"raw_affiliation_string":"University of Rennes, INRIA/Irisa, France","institution_ids":["https://openalex.org/I56067802","https://openalex.org/I1326498283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054641536","display_name":"Francesco Strozzi","orcid":"https://orcid.org/0000-0002-6845-6982"},"institutions":[{"id":"https://openalex.org/I2799613648","display_name":"Parco Tecnologico Padano","ror":"https://ror.org/05bamms85","country_code":"IT","type":"archive","lineage":["https://openalex.org/I2799613648"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Francesco Strozzi","raw_affiliation_strings":["Parco Tecnologico Padano, Lodi, Italy"],"affiliations":[{"raw_affiliation_string":"Parco Tecnologico Padano, Lodi, Italy","institution_ids":["https://openalex.org/I2799613648"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088404965","display_name":"Torsten Seemann","orcid":"https://orcid.org/0000-0001-6046-610X"},"institutions":[{"id":"https://openalex.org/I347366330","display_name":"Melbourne Bioinformatics","ror":"https://ror.org/05gkzhv48","country_code":"AU","type":"education","lineage":["https://openalex.org/I347366330"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Torsten Seemann","raw_affiliation_strings":["Monash University, Victorian Bioinformatics Consortium, Australia","VLSCI Life Sciences Computation Centre, University of Melbourne, Australia"],"affiliations":[{"raw_affiliation_string":"Monash University, Victorian Bioinformatics Consortium, Australia","institution_ids":["https://openalex.org/I347366330","https://openalex.org/I56590836"]},{"raw_affiliation_string":"VLSCI Life Sciences Computation Centre, University of Melbourne, Australia","institution_ids":["https://openalex.org/I347366330","https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013083229","display_name":"Clare Sloggett","orcid":"https://orcid.org/0000-0001-8409-6705"},"institutions":[{"id":"https://openalex.org/I347366330","display_name":"Melbourne Bioinformatics","ror":"https://ror.org/05gkzhv48","country_code":"AU","type":"education","lineage":["https://openalex.org/I347366330"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Clare Sloggett","raw_affiliation_strings":["VLSCI Life Sciences Computation Centre, University of Melbourne, Australia"],"affiliations":[{"raw_affiliation_string":"VLSCI Life Sciences Computation Centre, University of Melbourne, Australia","institution_ids":["https://openalex.org/I347366330","https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029941394","display_name":"Stian Soiland\u2010Reyes","orcid":null},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Stian Soiland-Reyes","raw_affiliation_strings":["University of Manchester, School of Computer Science, UK"],"affiliations":[{"raw_affiliation_string":"University of Manchester, School of Computer Science, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108534458","display_name":"William Spooner","orcid":null},"institutions":[{"id":"https://openalex.org/I4210118837","display_name":"ID Genomics (United States)","ror":"https://ror.org/02d77hg59","country_code":"US","type":"company","lineage":["https://openalex.org/I4210118837"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William Spooner","raw_affiliation_strings":["Eagle Genomics Ltd, Wakefield, MA, USA"],"affiliations":[{"raw_affiliation_string":"Eagle Genomics Ltd, Wakefield, MA, USA","institution_ids":["https://openalex.org/I4210118837"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048978715","display_name":"Sascha Steinbiss","orcid":"https://orcid.org/0000-0002-2151-0574"},"institutions":[{"id":"https://openalex.org/I159176309","display_name":"Universit\u00e4t Hamburg","ror":"https://ror.org/00g30e956","country_code":"DE","type":"education","lineage":["https://openalex.org/I159176309"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sascha Steinbiss","raw_affiliation_strings":["University of Hamburg, Center for Bioinformatics, Germany"],"affiliations":[{"raw_affiliation_string":"University of Hamburg, Center for Bioinformatics, Germany","institution_ids":["https://openalex.org/I159176309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081514947","display_name":"Andreas Tille","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Andreas Tille","raw_affiliation_strings":["Debian Project, UK"],"affiliations":[{"raw_affiliation_string":"Debian Project, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055648554","display_name":"Anthony J. Travis","orcid":"https://orcid.org/0000-0001-9895-8310"},"institutions":[{"id":"https://openalex.org/I195460627","display_name":"University of Aberdeen","ror":"https://ror.org/016476m91","country_code":"GB","type":"education","lineage":["https://openalex.org/I195460627"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Anthony J Travis","raw_affiliation_strings":["University of Aberdeen, Institute of Biological and Environmental Sciences, Aberdeen, Scotland, UK"],"affiliations":[{"raw_affiliation_string":"University of Aberdeen, Institute of Biological and Environmental Sciences, Aberdeen, Scotland, UK","institution_ids":["https://openalex.org/I195460627"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036205178","display_name":"Roman Valls Guimer\u00e0","orcid":"https://orcid.org/0000-0002-0034-9697"},"institutions":[{"id":"https://openalex.org/I161593684","display_name":"Stockholm University","ror":"https://ror.org/05f0yaq80","country_code":"SE","type":"education","lineage":["https://openalex.org/I161593684"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Roman Valls Guimera","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Science for Life Laboratory, Stockholm University, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Science for Life Laboratory, Stockholm University, Sweden","institution_ids":["https://openalex.org/I2800139495","https://openalex.org/I161593684"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050771876","display_name":"Toshiaki Katayama","orcid":null},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Toshiaki Katayama","raw_affiliation_strings":["Database Center for Life Science, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Tokyo, Japan","institution_ids":["https://openalex.org/I4210158934"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043278195","display_name":"Brad Chapman","orcid":"https://orcid.org/0000-0002-3026-1856"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brad A Chapman","raw_affiliation_strings":["Harvard Public School of Health, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Public School of Health, Boston, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]}],"institutions":[],"countries_distinct_count":11,"institutions_distinct_count":28,"corresponding_author_ids":["https://openalex.org/A5089261582"],"corresponding_institution_ids":["https://openalex.org/I9341345"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":5.171,"has_fulltext":true,"cited_by_count":67,"citation_normalized_percentile":{"value":0.95827413,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"15","issue":"S14","first_page":"S7","last_page":"S7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13280","display_name":"Biomedical and Engineering Education","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13280","display_name":"Biomedical and Engineering Education","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9544000029563904,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6528094410896301},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6180692911148071},{"id":"https://openalex.org/keywords/conversation","display_name":"Conversation","score":0.5556504726409912},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5154424905776978},{"id":"https://openalex.org/keywords/session","display_name":"Session (web analytics)","score":0.45770999789237976},{"id":"https://openalex.org/keywords/schedule","display_name":"Schedule","score":0.4432935118675232},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.44188398122787476},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.42198559641838074},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.18994933366775513},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.14740419387817383},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10884934663772583}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6528094410896301},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6180692911148071},{"id":"https://openalex.org/C2777200299","wikidata":"https://www.wikidata.org/wiki/Q52943","display_name":"Conversation","level":2,"score":0.5556504726409912},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5154424905776978},{"id":"https://openalex.org/C2779182362","wikidata":"https://www.wikidata.org/wiki/Q17126187","display_name":"Session (web analytics)","level":2,"score":0.45770999789237976},{"id":"https://openalex.org/C68387754","wikidata":"https://www.wikidata.org/wiki/Q7271585","display_name":"Schedule","level":2,"score":0.4432935118675232},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.44188398122787476},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.42198559641838074},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.18994933366775513},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.14740419387817383},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10884934663772583},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C46312422","wikidata":"https://www.wikidata.org/wiki/Q11024","display_name":"Communication","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003142","descriptor_name":"Communication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003142","descriptor_name":"Communication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003142","descriptor_name":"Communication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003299","descriptor_name":"Cooperative Behavior","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003299","descriptor_name":"Cooperative Behavior","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003299","descriptor_name":"Cooperative Behavior","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":11,"locations":[{"id":"doi:10.1186/1471-2105-15-s14-s7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-s14-s7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-S14-S7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25472764","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25472764","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire/95fbdc1c-3b91-49f9-a92d-3de8205f06e8","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/95fbdc1c-3b91-49f9-a92d-3de8205f06e8","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"M\u00f6ller, S, Afgan, E, Banck, M, Bonnal, R J P, Booth, T, Chilton, J, Cock, P J A, Gumbel, M, Harris, N, Holland, R, Kala\u0161, M, Kaj\u00e1n, L, Powell, D R, Prins, P, Quinn, J, Sallou, O, Strozzi, F, Seemann, T, Sloggett, C, Soiland-Reyes, S, Steinbiss, S, Tille, A, Travis, A J, Guimera, R V, Katayama, T & Chapman, B A 2014, 'Community-driven development for computational biology at Sprints, Hackathons and Codefests', B M C Bioinformatics. https://doi.org/10.1186/1471-2105-15-S14-S7","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:nora.nerc.ac.uk:508937","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306400758","display_name":"NERC Open Research Archive (Natural Environment Research Council)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I141816643","host_organization_name":"Natural Environment Research Council","host_organization_lineage":["https://openalex.org/I141816643"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Publication - Article"},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/262481","is_oa":true,"landing_page_url":"http://hdl.handle.net/11343/262481","pdf_url":"http://hdl.handle.net/11343/262481","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:osti.gov:1626300","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1626300","pdf_url":"https://www.osti.gov/servlets/purl/1626300","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:dash.harvard.edu:1/13581076","is_oa":true,"landing_page_url":"http://nrs.harvard.edu/urn-3:HUL.InstRepos:13581076","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:aura.abdn.ac.uk:2164/11670","is_oa":false,"landing_page_url":"http://www.scopus.com/inward/record.url?scp=84961577158&partnerID=8YFLogxK","pdf_url":null,"source":{"id":"https://openalex.org/S4306400966","display_name":"Aberdeen University Research Archive (Aberdeen University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I195460627","host_organization_name":"University of Aberdeen","host_organization_lineage":["https://openalex.org/I195460627"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal article"},{"id":"pmh:oai:bora.uib.no:1956/8861","is_oa":true,"landing_page_url":"https://hdl.handle.net/1956/8861","pdf_url":null,"source":{"id":"https://openalex.org/S4306400085","display_name":"Bergen Open Research Archive (BORA) (University of Bergen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4432739","host_organization_name":"University of Bergen","host_organization_lineage":["https://openalex.org/I4432739"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"S7","raw_type":"info:eu-repo/semantics/other"},{"id":"pmh:oai:pubmedcentral.nih.gov:4255748","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4255748","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/95fbdc1c-3b91-49f9-a92d-3de8205f06e8","is_oa":true,"landing_page_url":"https://www.research.manchester.ac.uk/portal/en/publications/communitydriven-development-for-computational-biology-at-sprints-hackathons-and-codefests(95fbdc1c-3b91-49f9-a92d-3de8205f06e8).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"M\u00f6ller, S, Afgan, E, Banck, M, Bonnal, R J P, Booth, T, Chilton, J, Cock, P J A, Gumbel, M, Harris, N, Holland, R, Kala\u0161, M, Kaj\u00e1n, L, Powell, D R, Prins, P, Quinn, J, Sallou, O, Strozzi, F, Seemann, T, Sloggett, C, Soiland-Reyes, S, Steinbiss, S, Tille, A, Travis, A J, Guimera, R V, Katayama, T & Chapman, B A 2014, 'Community-driven development for computational biology at Sprints, Hackathons and Codefests', B M C Bioinformatics. https://doi.org/10.1186/1471-2105-15-S14-S7","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-15-s14-s7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-s14-s7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-S14-S7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.41999998688697815}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320323299","display_name":"Norges Forskningsr\u00e5d","ror":"https://ror.org/00epmv149"},{"id":"https://openalex.org/F4320334631","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509"},{"id":"https://openalex.org/F4320338370","display_name":"FP7 Information and Communication Technologies","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2134386780.pdf","grobid_xml":"https://content.openalex.org/works/W2134386780.grobid-xml"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W1608781114","https://openalex.org/W1968366009","https://openalex.org/W1970525140","https://openalex.org/W1992674717","https://openalex.org/W2000822184","https://openalex.org/W2005800049","https://openalex.org/W2009815668","https://openalex.org/W2013475097","https://openalex.org/W2038777423","https://openalex.org/W2060184615","https://openalex.org/W2070342831","https://openalex.org/W2096093282","https://openalex.org/W2097288488","https://openalex.org/W2100827887","https://openalex.org/W2104483961","https://openalex.org/W2105803236","https://openalex.org/W2114850508","https://openalex.org/W2115236937","https://openalex.org/W2121792371","https://openalex.org/W2128567635","https://openalex.org/W2135361281","https://openalex.org/W2141541659","https://openalex.org/W2141663027","https://openalex.org/W2142863519","https://openalex.org/W2150934173","https://openalex.org/W2161427213","https://openalex.org/W2164010954","https://openalex.org/W2171200738","https://openalex.org/W2284755112","https://openalex.org/W2916251779","https://openalex.org/W4244006029"],"related_works":["https://openalex.org/W1968552888","https://openalex.org/W2374116601","https://openalex.org/W3093134843","https://openalex.org/W2378167147","https://openalex.org/W3210777354","https://openalex.org/W2772323916","https://openalex.org/W2281307425","https://openalex.org/W1511346092","https://openalex.org/W2464405057","https://openalex.org/W1527532029"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":10},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":1}],"updated_date":"2026-03-04T09:10:02.777135","created_date":"2025-10-10T00:00:00"}