{"id":"https://openalex.org/W2047300262","doi":"https://doi.org/10.1186/1471-2105-14-141","title":"An automated graphics tool for comparative genomics: the Coulson plot generator","display_name":"An automated graphics tool for comparative genomics: the Coulson plot generator","publication_year":2013,"publication_date":"2013-04-26","ids":{"openalex":"https://openalex.org/W2047300262","doi":"https://doi.org/10.1186/1471-2105-14-141","mag":"2047300262","pmid":"https://pubmed.ncbi.nlm.nih.gov/23621955"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-14-141","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-141","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-141","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-141","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110871874","display_name":"Helen I. Field","orcid":null},"institutions":[{"id":"https://openalex.org/I4210143578","display_name":"Genomics England","ror":"https://ror.org/04rxxfz69","country_code":"GB","type":"other","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4210143578"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Helen I Field","raw_affiliation_strings":["LGC Genomics Ltd, Pindar Road, Hoddesdon, Hertfordshire EN11 0WZ, UK. imogen.field@lgcgenomics.com","LGC Genomics Ltd, Hoddesdon, UK"],"affiliations":[{"raw_affiliation_string":"LGC Genomics Ltd, Pindar Road, Hoddesdon, Hertfordshire EN11 0WZ, UK. imogen.field@lgcgenomics.com","institution_ids":["https://openalex.org/I4210143578"]},{"raw_affiliation_string":"LGC Genomics Ltd, Hoddesdon, UK","institution_ids":["https://openalex.org/I4210143578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106266907","display_name":"Richard Coulson","orcid":null},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Richard MR Coulson","raw_affiliation_strings":["Cambridge Institute for Medical Research, University of Cambridge, Cambridge, CB2 0XY, UK","Cambridge Institute for Medical Research; University of Cambridge; Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Cambridge Institute for Medical Research, University of Cambridge, Cambridge, CB2 0XY, UK","institution_ids":["https://openalex.org/I241749"]},{"raw_affiliation_string":"Cambridge Institute for Medical Research; University of Cambridge; Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061440312","display_name":"Mark C. Field","orcid":"https://orcid.org/0000-0002-4866-2885"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mark C Field","raw_affiliation_strings":["Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge, CB2 1QP, UK","Department of Pathology, University of Cambridge Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge, CB2 1QP, UK","institution_ids":["https://openalex.org/I241749"]},{"raw_affiliation_string":"Department of Pathology, University of Cambridge Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5110871874"],"corresponding_institution_ids":["https://openalex.org/I4210143578"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.2459,"has_fulltext":true,"cited_by_count":37,"citation_normalized_percentile":{"value":0.87902374,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"14","issue":"1","first_page":"141","last_page":"141"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/plot","display_name":"Plot (graphics)","score":0.6477516293525696},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5366626977920532},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5365469455718994},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"Comparative genomics","score":0.49915432929992676},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4770761728286743},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.45785555243492126},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.4466274082660675},{"id":"https://openalex.org/keywords/file-format","display_name":"File format","score":0.44020721316337585},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4377610683441162},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.39899539947509766},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3685903549194336},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.3634432256221771},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32637691497802734},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2570798099040985},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.182675302028656},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1567818522453308},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.095783531665802}],"concepts":[{"id":"https://openalex.org/C167651023","wikidata":"https://www.wikidata.org/wiki/Q1474611","display_name":"Plot (graphics)","level":2,"score":0.6477516293525696},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5366626977920532},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5365469455718994},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.49915432929992676},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4770761728286743},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.45785555243492126},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.4466274082660675},{"id":"https://openalex.org/C97250363","wikidata":"https://www.wikidata.org/wiki/Q235557","display_name":"File format","level":2,"score":0.44020721316337585},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4377610683441162},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.39899539947509766},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3685903549194336},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.3634432256221771},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32637691497802734},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2570798099040985},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.182675302028656},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1567818522453308},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.095783531665802},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021122","descriptor_name":"Protein Subunits","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D021122","descriptor_name":"Protein Subunits","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D021122","descriptor_name":"Protein Subunits","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-14-141","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-141","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-141","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23621955","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23621955","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:2668280","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3668160","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3668160","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3668160","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/244633","is_oa":true,"landing_page_url":"http://www.dspace.cam.ac.uk/handle/1810/244633","pdf_url":null,"source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-14-141","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-141","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-141","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2101603458","display_name":null,"funder_award_id":"082813","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320319946","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2047300262.pdf","grobid_xml":"https://content.openalex.org/works/W2047300262.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W15433333","https://openalex.org/W1833509159","https://openalex.org/W1983686919","https://openalex.org/W1984000730","https://openalex.org/W2000765943","https://openalex.org/W2023404116","https://openalex.org/W2027474131","https://openalex.org/W2029692713","https://openalex.org/W2031543645","https://openalex.org/W2045375618","https://openalex.org/W2051357191","https://openalex.org/W2066623446","https://openalex.org/W2085814327","https://openalex.org/W2107386898","https://openalex.org/W2108561882","https://openalex.org/W2109166035","https://openalex.org/W2112711937","https://openalex.org/W2127266861","https://openalex.org/W2135621733","https://openalex.org/W2139307727","https://openalex.org/W2158329045","https://openalex.org/W2161603653","https://openalex.org/W2165733650","https://openalex.org/W2167859555","https://openalex.org/W2171020662"],"related_works":["https://openalex.org/W4296236209","https://openalex.org/W2075139582","https://openalex.org/W1565527690","https://openalex.org/W1493660383","https://openalex.org/W2759519215","https://openalex.org/W4318240630","https://openalex.org/W2353729507","https://openalex.org/W2350466590","https://openalex.org/W1542620732","https://openalex.org/W3031625301"],"abstract_inverted_index":{"CPG":[0],"software":[1],"is":[2],"available":[3],"at":[4],"sourceforge":[5],"http://sourceforge.net/projects/coulson":[6],"and":[7],"http://dl.dropbox.com/u/6701906/Web/Sites/Labsite/CPG.html.":[8]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":7},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
