{"id":"https://openalex.org/W3170383165","doi":"https://doi.org/10.1186/s40708-021-00132-6","title":"A deep convolutional visual encoding model of neuronal responses in the LGN","display_name":"A deep convolutional visual encoding model of neuronal responses in the LGN","publication_year":2021,"publication_date":"2021-06-15","ids":{"openalex":"https://openalex.org/W3170383165","doi":"https://doi.org/10.1186/s40708-021-00132-6","mag":"3170383165","pmid":"https://pubmed.ncbi.nlm.nih.gov/34129111"},"language":"en","primary_location":{"id":"doi:10.1186/s40708-021-00132-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s40708-021-00132-6","pdf_url":"https://braininformatics.springeropen.com/counter/pdf/10.1186/s40708-021-00132-6","source":{"id":"https://openalex.org/S2498492389","display_name":"Brain Informatics","issn_l":"2198-4018","issn":["2198-4018","2198-4026"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Brain Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://braininformatics.springeropen.com/counter/pdf/10.1186/s40708-021-00132-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109644615","display_name":"Eslam Mounier","orcid":null},"institutions":[{"id":"https://openalex.org/I107720978","display_name":"Ain Shams University","ror":"https://ror.org/00cb9w016","country_code":"EG","type":"education","lineage":["https://openalex.org/I107720978"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Eslam Mounier","raw_affiliation_strings":["Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt","institution_ids":["https://openalex.org/I107720978"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062655717","display_name":"Bassem A. Abdullah","orcid":"https://orcid.org/0009-0002-7500-5220"},"institutions":[{"id":"https://openalex.org/I107720978","display_name":"Ain Shams University","ror":"https://ror.org/00cb9w016","country_code":"EG","type":"education","lineage":["https://openalex.org/I107720978"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Bassem Abdullah","raw_affiliation_strings":["Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt","institution_ids":["https://openalex.org/I107720978"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029239080","display_name":"Hani Mahdi","orcid":"https://orcid.org/0000-0002-7442-9948"},"institutions":[{"id":"https://openalex.org/I107720978","display_name":"Ain Shams University","ror":"https://ror.org/00cb9w016","country_code":"EG","type":"education","lineage":["https://openalex.org/I107720978"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Hani Mahdi","raw_affiliation_strings":["Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt","institution_ids":["https://openalex.org/I107720978"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053955479","display_name":"Seif Eldawlatly","orcid":"https://orcid.org/0000-0003-2873-0569"},"institutions":[{"id":"https://openalex.org/I107720978","display_name":"Ain Shams University","ror":"https://ror.org/00cb9w016","country_code":"EG","type":"education","lineage":["https://openalex.org/I107720978"]},{"id":"https://openalex.org/I96823368","display_name":"German University in Cairo","ror":"https://ror.org/03rjt0z37","country_code":"EG","type":"education","lineage":["https://openalex.org/I96823368"]}],"countries":["EG"],"is_corresponding":true,"raw_author_name":"Seif Eldawlatly","raw_affiliation_strings":["Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt. seldawlatly@eng.asu.edu.eg","Faculty of Media Engineering and Technology, German University in Cairo, Cairo, Egypt. seldawlatly@eng.asu.edu.eg","Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt"],"raw_orcid":"https://orcid.org/0000-0003-2873-0569","affiliations":[{"raw_affiliation_string":"Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt. seldawlatly@eng.asu.edu.eg","institution_ids":["https://openalex.org/I107720978"]},{"raw_affiliation_string":"Faculty of Media Engineering and Technology, German University in Cairo, Cairo, Egypt. seldawlatly@eng.asu.edu.eg","institution_ids":["https://openalex.org/I96823368"]},{"raw_affiliation_string":"Computer and Systems Engineering Department, Faculty of Engineering, Ain Shams University, 1 El-Sarayat St., Abbassia, Cairo, Egypt","institution_ids":["https://openalex.org/I107720978"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5053955479"],"corresponding_institution_ids":["https://openalex.org/I107720978","https://openalex.org/I96823368"],"apc_list":{"value":790,"currency":"GBP","value_usd":969},"apc_paid":{"value":790,"currency":"GBP","value_usd":969},"fwci":0.207,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.44130298,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"8","issue":"1","first_page":"11","last_page":"11"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11601","display_name":"Neuroscience and Neural Engineering","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11601","display_name":"Neuroscience and Neural Engineering","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10502","display_name":"Advanced Memory and Neural Computing","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/lateral-geniculate-nucleus","display_name":"Lateral geniculate nucleus","score":0.8514903783798218},{"id":"https://openalex.org/keywords/visual-cortex","display_name":"Visual cortex","score":0.6675897240638733},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.5600122809410095},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5497137904167175},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5448356866836548},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.5255588293075562},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5131598114967346},{"id":"https://openalex.org/keywords/stimulus","display_name":"Stimulus (psychology)","score":0.49175217747688293},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14095130562782288},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.12526732683181763}],"concepts":[{"id":"https://openalex.org/C2776362945","wikidata":"https://www.wikidata.org/wiki/Q719179","display_name":"Lateral geniculate nucleus","level":3,"score":0.8514903783798218},{"id":"https://openalex.org/C2779345533","wikidata":"https://www.wikidata.org/wiki/Q75785","display_name":"Visual cortex","level":2,"score":0.6675897240638733},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.5600122809410095},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5497137904167175},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5448356866836548},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.5255588293075562},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5131598114967346},{"id":"https://openalex.org/C2779918689","wikidata":"https://www.wikidata.org/wiki/Q3771842","display_name":"Stimulus (psychology)","level":2,"score":0.49175217747688293},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14095130562782288},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.12526732683181763},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s40708-021-00132-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s40708-021-00132-6","pdf_url":"https://braininformatics.springeropen.com/counter/pdf/10.1186/s40708-021-00132-6","source":{"id":"https://openalex.org/S2498492389","display_name":"Brain Informatics","issn_l":"2198-4018","issn":["2198-4018","2198-4026"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Brain Informatics","raw_type":"journal-article"},{"id":"pmid:34129111","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34129111","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Brain informatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:970d04cc62244ba6a8e0f36f1039e279","is_oa":true,"landing_page_url":"https://doaj.org/article/970d04cc62244ba6a8e0f36f1039e279","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brain Informatics, Vol 8, Iss 1, Pp 1-16 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8206408","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8206408","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brain Inform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s40708-021-00132-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s40708-021-00132-6","pdf_url":"https://braininformatics.springeropen.com/counter/pdf/10.1186/s40708-021-00132-6","source":{"id":"https://openalex.org/S2498492389","display_name":"Brain Informatics","issn_l":"2198-4018","issn":["2198-4018","2198-4026"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Brain Informatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4791581896","display_name":null,"funder_award_id":"17-029","funder_id":"https://openalex.org/F4320321078","funder_display_name":"The World Academy of Sciences"}],"funders":[{"id":"https://openalex.org/F4320321078","display_name":"The World Academy of Sciences","ror":"https://ror.org/00twbd828"},{"id":"https://openalex.org/F4320321655","display_name":"Science and Technology Development Fund","ror":"https://ror.org/044vr6g03"},{"id":"https://openalex.org/F4320324699","display_name":"Ministerial Standing Committee on Scientific and Technological Cooperation of the Organization of Islamic Cooperation","ror":"https://ror.org/04mnke839"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3170383165.pdf","grobid_xml":"https://content.openalex.org/works/W3170383165.grobid-xml"},"referenced_works_count":55,"referenced_works":["https://openalex.org/W68224751","https://openalex.org/W249845531","https://openalex.org/W1522301498","https://openalex.org/W1582091054","https://openalex.org/W1677182931","https://openalex.org/W1778783464","https://openalex.org/W1964738011","https://openalex.org/W1970039327","https://openalex.org/W1975867390","https://openalex.org/W1978677882","https://openalex.org/W1978895145","https://openalex.org/W1985304131","https://openalex.org/W1986835104","https://openalex.org/W1989630635","https://openalex.org/W1991266025","https://openalex.org/W1999678808","https://openalex.org/W1999831792","https://openalex.org/W2027187284","https://openalex.org/W2027961941","https://openalex.org/W2046191029","https://openalex.org/W2049899464","https://openalex.org/W2050351326","https://openalex.org/W2059146770","https://openalex.org/W2069519142","https://openalex.org/W2074942478","https://openalex.org/W2091496561","https://openalex.org/W2099468530","https://openalex.org/W2112246597","https://openalex.org/W2116074682","https://openalex.org/W2141700222","https://openalex.org/W2142614928","https://openalex.org/W2147502381","https://openalex.org/W2163815564","https://openalex.org/W2165362195","https://openalex.org/W2166213983","https://openalex.org/W2169183612","https://openalex.org/W2250904038","https://openalex.org/W2289825167","https://openalex.org/W2319413899","https://openalex.org/W2333683836","https://openalex.org/W2398281123","https://openalex.org/W2533013471","https://openalex.org/W2551302722","https://openalex.org/W2586759362","https://openalex.org/W2606913441","https://openalex.org/W2618353736","https://openalex.org/W2810603154","https://openalex.org/W2899866288","https://openalex.org/W2919115771","https://openalex.org/W2950535698","https://openalex.org/W2952673047","https://openalex.org/W2963138386","https://openalex.org/W3023058184","https://openalex.org/W4246508603","https://openalex.org/W4298082496"],"related_works":["https://openalex.org/W11242434","https://openalex.org/W2051551602","https://openalex.org/W1890061790","https://openalex.org/W2268167340","https://openalex.org/W3188274792","https://openalex.org/W2059945170","https://openalex.org/W3186638810","https://openalex.org/W2794016691","https://openalex.org/W2066531649","https://openalex.org/W2083281221"],"abstract_inverted_index":{"The":[0,69,154,230],"Lateral":[1],"Geniculate":[2],"Nucleus":[3],"(LGN)":[4],"represents":[5],"one":[6,28],"of":[7,95,122,156,184,215,235,243],"the":[8,13,42,45,93,111,144,152,157,177,180,191,195,205,212,216,224,233],"major":[9],"processing":[10,21],"sites":[11],"along":[12],"visual":[14,22,33,46,66,80,137],"pathway.":[15],"Despite":[16],"its":[17,25],"crucial":[18],"role":[19],"in":[20,62,84,102,110,113,129,211],"information":[23],"and":[24,44,134,143,166,179,186,194],"utility":[26],"as":[27,240],"target":[29],"for":[30,190],"recently":[31],"developed":[32],"prostheses,":[34],"it":[35],"is":[36,207],"much":[37],"less":[38],"studied":[39],"compared":[40],"to":[41,57,64,86,91,131,150,209],"retina":[43],"cortex.":[47],"In":[48],"this":[49],"paper,":[50],"we":[51],"introduce":[52],"a":[53,72,118],"deep":[54,73,236],"learning":[55],"encoder":[56,70],"predict":[58,92],"LGN":[59,87,96,112,244],"neuronal":[60,88,120],"firing":[61,89,141,168,182,198],"response":[63,94,130],"different":[65,162,167],"stimulation":[67,138,146],"patterns.":[68,139],"comprises":[71],"Convolutional":[74],"Neural":[75,125],"Network":[76],"(CNN)":[77],"that":[78,204],"incorporates":[79],"stimulus":[81],"spatiotemporal":[82,213],"representation":[83],"addition":[85],"history":[90],"neurons.":[97],"Extracellular":[98],"activity":[99,126],"was":[100,127,159,188],"recorded":[101,128,217],"vivo":[103],"using":[104,161],"multi-electrode":[105],"arrays":[106],"from":[107],"single":[108],"units":[109],"12":[114],"anesthetized":[115],"rats":[116],"with":[117],"total":[119],"population":[121],"150":[123],"units.":[124],"single-pixel,":[132],"checkerboard":[133],"geometrical":[135],"shapes":[136],"Extracted":[140],"rates":[142,183],"corresponding":[145],"patterns":[147],"were":[148],"used":[149],"train":[151],"model.":[153],"performance":[155],"model":[158,206],"assessed":[160],"testing":[163],"data":[164],"sets":[165],"rate":[169,199],"windows.":[170],"An":[171],"overall":[172],"mean":[173],"correlation":[174],"coefficient":[175],"between":[176],"actual":[178],"predicted":[181],"0.57":[185],"0.7":[187],"achieved":[189],"10":[192],"ms":[193,197],"50":[196],"windows,":[200],"respectively.":[201],"Results":[202],"demonstrate":[203],"robust":[208],"variability":[210],"properties":[214],"neurons":[218],"outperforming":[219],"other":[220],"examined":[221],"models":[222,242],"including":[223],"state-of-the-art":[225],"Generalized":[226],"Linear":[227],"Model":[228],"(GLM).":[229],"results":[231],"indicate":[232],"potential":[234],"convolutional":[237],"neural":[238],"networks":[239],"viable":[241],"firing.":[245]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
