{"id":"https://openalex.org/W4414351194","doi":"https://doi.org/10.1186/s13326-026-00350-z","title":"Representing Dental Caries and Dysbiosis within the Oral Microbiome in the Oral Health and Disease Ontology","display_name":"Representing Dental Caries and Dysbiosis within the Oral Microbiome in the Oral Health and Disease Ontology","publication_year":2025,"publication_date":"2025-09-19","ids":{"openalex":"https://openalex.org/W4414351194","doi":"https://doi.org/10.1186/s13326-026-00350-z","pmid":"https://pubmed.ncbi.nlm.nih.gov/41001549"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-026-00350-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-026-00350-z","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13326-026-00350-z.pdf","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"preprint","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1186/s13326-026-00350-z.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005828535","display_name":"William D. Duncan","orcid":"https://orcid.org/0000-0001-9625-1899"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]},{"id":"https://openalex.org/I94062374","display_name":"Florida College","ror":"https://ror.org/010bgev76","country_code":"US","type":"education","lineage":["https://openalex.org/I94062374"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"William D. Duncan","raw_affiliation_strings":["University of Florida College of Dentistry"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Florida College of Dentistry","institution_ids":["https://openalex.org/I94062374","https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091417854","display_name":"Amarpreet Sabharwal","orcid":"https://orcid.org/0000-0002-9444-837X"},"institutions":[{"id":"https://openalex.org/I125749732","display_name":"Western University","ror":"https://ror.org/02grkyz14","country_code":"CA","type":"education","lineage":["https://openalex.org/I125749732"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Amarpreet Sabharwal","raw_affiliation_strings":["Western University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Western University","institution_ids":["https://openalex.org/I125749732"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084833749","display_name":"Alexander D. Diehl","orcid":"https://orcid.org/0000-0001-9990-8331"},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander D. Diehl","raw_affiliation_strings":["University at Buffalo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University at Buffalo","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012586149","display_name":"Nivedita Dutta","orcid":"https://orcid.org/0000-0001-6424-4096"},"institutions":[{"id":"https://openalex.org/I216306336","display_name":"J. Selye University","ror":"https://ror.org/00zevd106","country_code":"SK","type":"education","lineage":["https://openalex.org/I216306336"]}],"countries":["SK"],"is_corresponding":false,"raw_author_name":"Nivedita Dutta","raw_affiliation_strings":["Self-Employed Clinician and Clinical Researcher"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Self-Employed Clinician and Clinical Researcher","institution_ids":["https://openalex.org/I216306336"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030579890","display_name":"Matthew Diller","orcid":"https://orcid.org/0000-0001-6378-1703"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I2800548410","display_name":"United States National Library of Medicine","ror":"https://ror.org/0060t0j89","country_code":"US","type":"archive","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Diller","raw_affiliation_strings":["National Library of Medicine, National Institutes of Health"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Library of Medicine, National Institutes of Health","institution_ids":["https://openalex.org/I2800548410","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062038813","display_name":"Marcin P. Joachimiak","orcid":"https://orcid.org/0000-0001-8175-045X"},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcin P. Joachimiak","raw_affiliation_strings":["Lawrence Berkeley National Laboratory"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lawrence Berkeley National Laboratory","institution_ids":["https://openalex.org/I148283060"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090103793","display_name":"Gopikrishnan M. Chandrasekharan","orcid":null},"institutions":[{"id":"https://openalex.org/I4388446366","display_name":"Indiana University Indianapolis","ror":"https://ror.org/03eftgw80","country_code":"US","type":"education","lineage":["https://openalex.org/I4388446366","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gopikrishnan M. Chandrasekharan","raw_affiliation_strings":["Indiana University Indianapolis"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indiana University Indianapolis","institution_ids":["https://openalex.org/I55769427","https://openalex.org/I4388446366"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5005828535"],"corresponding_institution_ids":["https://openalex.org/I33213144","https://openalex.org/I94062374"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.25900802,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"17","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10257","display_name":"Oral microbiology and periodontitis research","score":0.9696999788284302,"subfield":{"id":"https://openalex.org/subfields/3506","display_name":"Periodontics"},"field":{"id":"https://openalex.org/fields/35","display_name":"Dentistry"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10257","display_name":"Oral microbiology and periodontitis research","score":0.9696999788284302,"subfield":{"id":"https://openalex.org/subfields/3506","display_name":"Periodontics"},"field":{"id":"https://openalex.org/fields/35","display_name":"Dentistry"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10368","display_name":"Dental Health and Care Utilization","score":0.008999999612569809,"subfield":{"id":"https://openalex.org/subfields/3506","display_name":"Periodontics"},"field":{"id":"https://openalex.org/fields/35","display_name":"Dentistry"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.004999999888241291,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dysbiosis","display_name":"Dysbiosis","score":0.880299985408783},{"id":"https://openalex.org/keywords/oral-microbiome","display_name":"Oral Microbiome","score":0.7159000039100647},{"id":"https://openalex.org/keywords/oral-health","display_name":"Oral health","score":0.6990000009536743},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.6474999785423279},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.546500027179718},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5213000178337097},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.5031999945640564}],"concepts":[{"id":"https://openalex.org/C2777165150","wikidata":"https://www.wikidata.org/wiki/Q269334","display_name":"Dysbiosis","level":3,"score":0.880299985408783},{"id":"https://openalex.org/C2910160754","wikidata":"https://www.wikidata.org/wiki/Q1500347","display_name":"Oral Microbiome","level":3,"score":0.7159000039100647},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.7113999724388123},{"id":"https://openalex.org/C2992672162","wikidata":"https://www.wikidata.org/wiki/Q12128","display_name":"Oral health","level":2,"score":0.6990000009536743},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.6474999785423279},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.546500027179718},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5213000178337097},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.5031999945640564},{"id":"https://openalex.org/C2986629439","wikidata":"https://www.wikidata.org/wiki/Q9635","display_name":"Oral cavity","level":2,"score":0.3930000066757202},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3840000033378601},{"id":"https://openalex.org/C54510867","wikidata":"https://www.wikidata.org/wiki/Q2508462","display_name":"Oral and maxillofacial pathology","level":2,"score":0.3481999933719635},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.33660000562667847},{"id":"https://openalex.org/C64357122","wikidata":"https://www.wikidata.org/wiki/Q1149766","display_name":"Causality (physics)","level":2,"score":0.30820000171661377},{"id":"https://openalex.org/C2779914569","wikidata":"https://www.wikidata.org/wiki/Q143504","display_name":"Dental plaque","level":2,"score":0.304500013589859},{"id":"https://openalex.org/C177713679","wikidata":"https://www.wikidata.org/wiki/Q679690","display_name":"Intensive care medicine","level":1,"score":0.299699991941452},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.28119999170303345},{"id":"https://openalex.org/C158689903","wikidata":"https://www.wikidata.org/wiki/Q450090","display_name":"Oral microbiology","level":3,"score":0.27410000562667847},{"id":"https://openalex.org/C2987857752","wikidata":"https://www.wikidata.org/wiki/Q12147","display_name":"Human health","level":2,"score":0.257099986076355},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.2565000057220459}],"mesh":[],"locations_count":9,"locations":[{"id":"doi:10.1186/s13326-026-00350-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-026-00350-z","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13326-026-00350-z.pdf","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"doi:10.21203/rs.3.rs-7265626/v1","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.3.rs-7265626/v1","pdf_url":"https://www.researchsquare.com/article/rs-7265626/latest.pdf","source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},{"id":"pmid:41001549","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41001549","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Research square","raw_type":null},{"id":"pmid:42032627","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42032627","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:doaj.org/article:a5b7869e980d4145bd490e55bb292e2d","is_oa":true,"landing_page_url":"https://doaj.org/article/a5b7869e980d4145bd490e55bb292e2d","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 17, Iss 1 (2026)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:11267238","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12458555","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:12458555","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12458555/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Res Sq","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:13109892","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13109892/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:oai:scholarworks.indianapolis.iu.edu:1805/56276","is_oa":true,"landing_page_url":"https://hdl.handle.net/1805/56276","pdf_url":null,"source":{"id":"https://openalex.org/S4306400987","display_name":"IUScholarWorks (Indiana University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I592451","host_organization_name":"Indiana University","host_organization_lineage":["https://openalex.org/I592451"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PMC","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1186/s13326-026-00350-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-026-00350-z","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13326-026-00350-z.pdf","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4414351194.pdf","grobid_xml":"https://content.openalex.org/works/W4414351194.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1870514323","https://openalex.org/W1871852719","https://openalex.org/W1975062706","https://openalex.org/W1991748908","https://openalex.org/W2098976315","https://openalex.org/W2103260426","https://openalex.org/W2104246257","https://openalex.org/W2123152121","https://openalex.org/W2142111019","https://openalex.org/W2150791944","https://openalex.org/W2158191506","https://openalex.org/W2521644033","https://openalex.org/W2531883117","https://openalex.org/W2766396640","https://openalex.org/W2888828233","https://openalex.org/W2981363463","https://openalex.org/W2984482263","https://openalex.org/W2997582485","https://openalex.org/W3018965582","https://openalex.org/W3080752706","https://openalex.org/W3106811464","https://openalex.org/W3158890032","https://openalex.org/W3170771812","https://openalex.org/W3214608846","https://openalex.org/W4211107393","https://openalex.org/W4220666269","https://openalex.org/W4283026200","https://openalex.org/W4313456661","https://openalex.org/W4388765867"],"related_works":[],"abstract_inverted_index":{"Background:":[0],"Dental":[1],"caries":[2,67,140,160],"is":[3,113,208],"an":[4,209],"oral":[5,26,94,143,192,219,244],"health":[6],"condition":[7],"in":[8,44,92],"which":[9],"cariogenic":[10],"bacteria":[11],"demineralize":[12],"and":[13,25,30,60,83,103,118,130,141,161,177,183,205,238],"decay":[14],"teeth.":[15],"It":[16,225],"arises":[17],"due":[18],"to":[19,116,137,164,179],"interaction":[20],"between":[21,65],"the":[22,37,41,45,54,63,81,93,98,120,142,155,165,180,196,216,233],"host,":[23],"environment,":[24],"microbiome.":[27,95,144],"Current":[28],"terminologies":[29,129],"ontologies,":[31],"however,":[32],"do":[33],"not":[34,151],"accurately":[35,189],"represent":[36,138,152,190],"important":[38],"role":[39],"that":[40,76,147,187,230],"microbiome":[42,245],"has":[43],"formation":[46],"of":[47,57,80,90,101,159,171,198,218,235],"carious":[48,58],"lesions.":[49],"Rather,":[50],"they":[51,148],"focus":[52],"on":[53,109,222],"anatomical":[55],"features":[56],"lesions":[59,75,85],"often":[61],"obfuscate":[62],"distinctions":[64],"dental":[66,124,139,199,223],"as":[68,74,84,87],"a":[69,72,88,114,169,227],"disease":[70],"affecting":[71],"tooth,":[73],"are":[77],"produced":[78,86],"because":[79],"disease,":[82],"result":[89,170],"dysbiosis":[91,194,221],"To":[96],"capture":[97],"current":[99,156],"state":[100],"evidence":[102],"provide":[104],"flexibility":[105],"for":[106,123,134,214],"evolving":[107],"literature":[108],"host-environment-microbiome":[110],"interactions,":[111],"there":[112],"need":[115],"revise":[117],"expand":[119],"ontological":[121],"framework":[122,229],"caries.":[125,200,224],"Results:":[126],"Several":[127],"established":[128],"ontologies":[131,213],"were":[132],"reviewed":[133],"terms":[135,176],"used":[136],"We":[145],"found":[146],"either":[149],"did":[150],"or":[153],"misrepresented":[154],"scientific":[157],"understanding":[158],"its":[162],"relation":[163],"microbial":[166,193,220],"dysbiosis.":[167],"As":[168],"these":[172],"deficiencies,":[173],"we":[174],"added":[175],"relations":[178],"Oral":[181,203],"Health":[182,204],"Disease":[184,206],"Ontology":[185,207],"(OHD)":[186],"more":[188,240],"how":[191],"influences":[195],"development":[197],"Conclusions:":[201],"The":[202],"advance":[210],"over":[211],"existing":[212],"representing":[215],"impact":[217],"provides":[226],"semantic":[228],"better":[231],"serves":[232],"needs":[234],"cariology":[236],"researchers":[237],"can":[239],"easily":[241],"incorporate":[242],"new":[243],"findings.":[246]},"counts_by_year":[],"updated_date":"2026-05-23T08:51:43.019350","created_date":"2025-10-10T00:00:00"}
