{"id":"https://openalex.org/W4403012771","doi":"https://doi.org/10.1186/s13326-024-00319-w","title":"MeSH2Matrix: combining MeSH keywords and machine learning for biomedical relation classification based on PubMed","display_name":"MeSH2Matrix: combining MeSH keywords and machine learning for biomedical relation classification based on PubMed","publication_year":2024,"publication_date":"2024-10-01","ids":{"openalex":"https://openalex.org/W4403012771","doi":"https://doi.org/10.1186/s13326-024-00319-w","pmid":"https://pubmed.ncbi.nlm.nih.gov/39354632"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-024-00319-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-024-00319-w","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13326-024-00319-w.pdf","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1186/s13326-024-00319-w.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017623179","display_name":"Houcemeddine Turki","orcid":"https://orcid.org/0000-0003-3492-2014"},"institutions":[{"id":"https://openalex.org/I142899784","display_name":"University of Sfax","ror":"https://ror.org/04d4sd432","country_code":"TN","type":"education","lineage":["https://openalex.org/I142899784"]}],"countries":["TN"],"is_corresponding":true,"raw_author_name":"Houcemeddine Turki","raw_affiliation_strings":["Data Engineering and Semantics Research Unit, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia. turkiabdelwaheb@hotmail.fr"],"affiliations":[{"raw_affiliation_string":"Data Engineering and Semantics Research Unit, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia. turkiabdelwaheb@hotmail.fr","institution_ids":["https://openalex.org/I142899784"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058219704","display_name":"Bonaventure F. P. Dossou","orcid":"https://orcid.org/0000-0002-0519-1761"},"institutions":[{"id":"https://openalex.org/I4210164802","display_name":"Mila - Quebec Artificial Intelligence Institute","ror":"https://ror.org/05c22rx21","country_code":"CA","type":"facility","lineage":["https://openalex.org/I4210164802"]},{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Bonaventure F. P. Dossou","raw_affiliation_strings":["McGill University, Montreal, Canada","Mila Quebec AI Institute, Montreal, Canada"],"affiliations":[{"raw_affiliation_string":"McGill University, Montreal, Canada","institution_ids":["https://openalex.org/I5023651"]},{"raw_affiliation_string":"Mila Quebec AI Institute, Montreal, Canada","institution_ids":["https://openalex.org/I4210164802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043359753","display_name":"Chris Chinenye Emezue","orcid":null},"institutions":[{"id":"https://openalex.org/I4210164802","display_name":"Mila - Quebec Artificial Intelligence Institute","ror":"https://ror.org/05c22rx21","country_code":"CA","type":"facility","lineage":["https://openalex.org/I4210164802"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"Chris Chinenye Emezue","raw_affiliation_strings":["Mila Quebec AI Institute, Montreal, Canada","Technical University of Munich, Munich, Germany"],"affiliations":[{"raw_affiliation_string":"Mila Quebec AI Institute, Montreal, Canada","institution_ids":["https://openalex.org/I4210164802"]},{"raw_affiliation_string":"Technical University of Munich, Munich, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035419879","display_name":"Abraham Toluwase Owodunni","orcid":null},"institutions":[{"id":"https://openalex.org/I134542131","display_name":"University of Ilorin","ror":"https://ror.org/032kdwk38","country_code":"NG","type":"education","lineage":["https://openalex.org/I134542131"]}],"countries":["NG"],"is_corresponding":false,"raw_author_name":"Abraham Toluwase Owodunni","raw_affiliation_strings":["Faculty of Life Sciences, University of Ilorin, Ilorin, Nigeria"],"affiliations":[{"raw_affiliation_string":"Faculty of Life Sciences, University of Ilorin, Ilorin, Nigeria","institution_ids":["https://openalex.org/I134542131"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053202663","display_name":"Mohamed Ali Hadj Taieb","orcid":"https://orcid.org/0000-0002-2786-8913"},"institutions":[{"id":"https://openalex.org/I142899784","display_name":"University of Sfax","ror":"https://ror.org/04d4sd432","country_code":"TN","type":"education","lineage":["https://openalex.org/I142899784"]}],"countries":["TN"],"is_corresponding":false,"raw_author_name":"Mohamed Ali Hadj Taieb","raw_affiliation_strings":["Data Engineering and Semantics Research Unit, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia"],"affiliations":[{"raw_affiliation_string":"Data Engineering and Semantics Research Unit, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia","institution_ids":["https://openalex.org/I142899784"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004381085","display_name":"Mohamed Ben Aouicha","orcid":"https://orcid.org/0000-0002-2277-5814"},"institutions":[{"id":"https://openalex.org/I142899784","display_name":"University of Sfax","ror":"https://ror.org/04d4sd432","country_code":"TN","type":"education","lineage":["https://openalex.org/I142899784"]}],"countries":["TN"],"is_corresponding":false,"raw_author_name":"Mohamed Ben Aouicha","raw_affiliation_strings":["Data Engineering and Semantics Research Unit, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia"],"affiliations":[{"raw_affiliation_string":"Data Engineering and Semantics Research Unit, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia","institution_ids":["https://openalex.org/I142899784"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059818185","display_name":"Hanen Ben Hassen","orcid":"https://orcid.org/0000-0001-7147-1801"},"institutions":[{"id":"https://openalex.org/I142899784","display_name":"University of Sfax","ror":"https://ror.org/04d4sd432","country_code":"TN","type":"education","lineage":["https://openalex.org/I142899784"]}],"countries":["TN"],"is_corresponding":false,"raw_author_name":"Hanen Ben Hassen","raw_affiliation_strings":["Laboratory of Probability and Statistics, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia"],"affiliations":[{"raw_affiliation_string":"Laboratory of Probability and Statistics, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia","institution_ids":["https://openalex.org/I142899784"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103094444","display_name":"Afif Masmoudi","orcid":"https://orcid.org/0000-0003-1665-5354"},"institutions":[{"id":"https://openalex.org/I142899784","display_name":"University of Sfax","ror":"https://ror.org/04d4sd432","country_code":"TN","type":"education","lineage":["https://openalex.org/I142899784"]}],"countries":["TN"],"is_corresponding":false,"raw_author_name":"Afif Masmoudi","raw_affiliation_strings":["Laboratory of Probability and Statistics, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia"],"affiliations":[{"raw_affiliation_string":"Laboratory of Probability and Statistics, Faculty of Sciences of Sfax, University of Sfax, Sfax, Tunisia","institution_ids":["https://openalex.org/I142899784"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5017623179"],"corresponding_institution_ids":["https://openalex.org/I142899784"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":0.2385,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.58158657,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"15","issue":"1","first_page":"18","last_page":"18"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9811999797821045,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8693854808807373},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.6818056106567383},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4317629337310791},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41757437586784363},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4135668873786926},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4106695055961609},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.348804771900177}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8693854808807373},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.6818056106567383},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4317629337310791},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41757437586784363},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4135668873786926},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4106695055961609},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.348804771900177}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s13326-024-00319-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-024-00319-w","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13326-024-00319-w.pdf","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:39354632","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39354632","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11445994","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11445994","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11445994/pdf/13326_2024_Article_319.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:17730408430a4d3fa54beb1284027b36","is_oa":true,"landing_page_url":"https://doaj.org/article/17730408430a4d3fa54beb1284027b36","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 15, Iss 1, Pp 1-28 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13326-024-00319-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-024-00319-w","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13326-024-00319-w.pdf","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8687892706","display_name":null,"funder_award_id":"Adapting Wikidata to support clinical practice using Data Science, Semantic Web and Machine Learning","funder_id":"https://openalex.org/F4320312538","funder_display_name":"Wikimedia Foundation"}],"funders":[{"id":"https://openalex.org/F4320310486","display_name":"University of Dayton","ror":"https://ror.org/021v3qy27"},{"id":"https://openalex.org/F4320312538","display_name":"Wikimedia Foundation","ror":"https://ror.org/032q98j12"},{"id":"https://openalex.org/F4320314196","display_name":"Craig Newmark Philanthropies","ror":null},{"id":"https://openalex.org/F4320331195","display_name":"Universit\u00e9 de Sousse","ror":"https://ror.org/00dmpgj58"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4403012771.pdf"},"referenced_works_count":65,"referenced_works":["https://openalex.org/W1518020032","https://openalex.org/W1601564520","https://openalex.org/W1605708511","https://openalex.org/W1976291885","https://openalex.org/W1979547427","https://openalex.org/W2021074129","https://openalex.org/W2039914071","https://openalex.org/W2045593168","https://openalex.org/W2063822856","https://openalex.org/W2068800403","https://openalex.org/W2070188654","https://openalex.org/W2080133951","https://openalex.org/W2082340937","https://openalex.org/W2098611338","https://openalex.org/W2110301462","https://openalex.org/W2114850508","https://openalex.org/W2135181562","https://openalex.org/W2149684865","https://openalex.org/W2155454737","https://openalex.org/W2235955903","https://openalex.org/W2250342289","https://openalex.org/W2264517602","https://openalex.org/W2282821441","https://openalex.org/W2505881787","https://openalex.org/W2560748602","https://openalex.org/W2598789561","https://openalex.org/W2605389103","https://openalex.org/W2618530766","https://openalex.org/W2618851150","https://openalex.org/W2792864647","https://openalex.org/W2795938834","https://openalex.org/W2797977484","https://openalex.org/W2807168680","https://openalex.org/W2889414415","https://openalex.org/W2951274974","https://openalex.org/W2953834914","https://openalex.org/W2963850840","https://openalex.org/W2964348125","https://openalex.org/W2964352358","https://openalex.org/W2970971581","https://openalex.org/W2975135115","https://openalex.org/W2976765180","https://openalex.org/W2979200397","https://openalex.org/W2979250794","https://openalex.org/W3005086430","https://openalex.org/W3089158044","https://openalex.org/W3092152105","https://openalex.org/W3101206394","https://openalex.org/W3104015140","https://openalex.org/W3110827841","https://openalex.org/W3168504661","https://openalex.org/W3199561489","https://openalex.org/W3204245871","https://openalex.org/W4206626878","https://openalex.org/W4206631742","https://openalex.org/W4220712390","https://openalex.org/W4294552392","https://openalex.org/W4294732911","https://openalex.org/W4298002895","https://openalex.org/W4307572272","https://openalex.org/W4320913850","https://openalex.org/W4385737274","https://openalex.org/W4386701456","https://openalex.org/W4394789579","https://openalex.org/W6968964123"],"related_works":["https://openalex.org/W4234874385","https://openalex.org/W2323648130","https://openalex.org/W2157140558","https://openalex.org/W2378782423","https://openalex.org/W2388988621","https://openalex.org/W2357797405","https://openalex.org/W2366623913","https://openalex.org/W2374905595","https://openalex.org/W2516693588","https://openalex.org/W2116112408"],"abstract_inverted_index":{"Biomedical":[0],"relation":[1,74,132,176],"classification":[2,75,231],"has":[3],"been":[4],"significantly":[5],"improved":[6],"by":[7],"the":[8,16,25,47,77,114,129,135,169,206,209,213,234],"application":[9],"of":[10,19,30,39,46,50,79,86,94,116,122,137,171,184,237],"advanced":[11],"machine":[12,150],"learning":[13,151],"techniques":[14],"on":[15,27,224,233],"raw":[17,31],"texts":[18],"scholarly":[20],"publications.":[21,239],"Despite":[22],"this":[23,61,65],"improvement,":[24],"reliance":[26],"large":[28],"chunks":[29],"text":[32],"makes":[33],"these":[34],"algorithms":[35,227],"suffer":[36],"in":[37,56],"terms":[38],"generalization,":[40],"precision,":[41],"and":[42,120,134,147,161,189,199,212],"reliability.":[43],"The":[44],"use":[45],"distinctive":[48],"characteristics":[49],"bibliographic":[51],"metadata":[52],"can":[53],"prove":[54],"effective":[55],"achieving":[57],"better":[58,204,226],"performance":[59],"for":[60,72,140,174,186,191,228],"challenging":[62],"task.":[63],"In":[64],"research":[66],"paper,":[67],"we":[68,88,145,195],"introduce":[69,89],"an":[70,182],"approach":[71,173],"biomedical":[73,96,175,214,229],"using":[76,102],"qualifiers":[78,115,211],"co-occurring":[80],"Medical":[81],"Subject":[82],"Headings":[83],"(MeSH).":[84],"First":[85],"all,":[87],"MeSH2Matrix,":[90,144,243],"our":[91,103,172,248],"dataset":[92,106],"consisting":[93],"46,469":[95],"relations":[97,139,215],"curated":[98],"from":[99],"PubMed":[100,238],"publications":[101],"approach.":[104],"Our":[105,178,218],"includes":[107],"a":[108,157,162],"matrix":[109,198],"that":[110],"maps":[111],"associations":[112],"between":[113,208],"subject":[117],"MeSH":[118,124,210,235],"keywords":[119,236],"those":[121],"object":[123],"keywords.":[125],"It":[126],"also":[127],"specifies":[128],"corresponding":[130],"Wikidata":[131],"type":[133],"superclass":[136],"semantic":[138],"each":[141],"relation.":[142],"Using":[143],"build":[146],"train":[148],"three":[149],"models":[152],"(Support":[153],"Vector":[154],"Machine":[155],"[SVM],":[156],"dense":[158],"model":[159,180],"[D-Model],":[160],"convolutional":[163],"neural":[164],"network":[165],"[C-Net])":[166],"to":[167,203],"evaluate":[168],"efficiency":[170],"classification.":[177],"best":[179],"achieves":[181],"accuracy":[183],"70.78%":[185],"195":[187],"classes":[188],"83.09%":[190],"five":[192],"superclasses.":[193],"Finally,":[194],"provide":[196],"confusion":[197],"extensive":[200],"feature":[201],"analyses":[202],"examine":[205],"relationship":[207],"being":[216],"classified.":[217],"results":[219],"will":[220],"hopefully":[221],"shed":[222],"light":[223],"developing":[225],"ontology":[230],"based":[232],"For":[240],"reproducibility":[241],"purposes,":[242],"as":[244,246],"well":[245],"all":[247],"source":[249],"codes,":[250],"are":[251],"made":[252],"publicly":[253],"accessible":[254],"at":[255],"https://github.com/SisonkeBiotik-Africa/MeSH2Matrix":[256],".":[257]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
