{"id":"https://openalex.org/W3160167365","doi":"https://doi.org/10.1186/s13326-021-00238-0","title":"Learning adaptive representations for entity recognition in the biomedical domain","display_name":"Learning adaptive representations for entity recognition in the biomedical domain","publication_year":2021,"publication_date":"2021-05-17","ids":{"openalex":"https://openalex.org/W3160167365","doi":"https://doi.org/10.1186/s13326-021-00238-0","mag":"3160167365","pmid":"https://pubmed.ncbi.nlm.nih.gov/34001263"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-021-00238-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-021-00238-0","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-021-00238-0","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-021-00238-0","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061388105","display_name":"Ivano Lauriola","orcid":"https://orcid.org/0000-0001-7236-061X"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]},{"id":"https://openalex.org/I2277624104","display_name":"Fondazione Bruno Kessler","ror":"https://ror.org/01j33xk10","country_code":"IT","type":"facility","lineage":["https://openalex.org/I2277624104"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Ivano Lauriola","raw_affiliation_strings":["Department of Mathematics, University of Padova, Via Trieste 63, Padova, 35121, Italy. ivano.lauriola@phd.unipd.it","Fondazione Bruno Kessler, Via Sommarive 18, Trento, 38123, Italy. ivano.lauriola@phd.unipd.it","Fondazione Bruno Kessler, Trento, Italy","Department of Mathematics, University of Padova, Padova, Italy"],"raw_orcid":"https://orcid.org/0000-0001-7236-061X","affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Padova, Via Trieste 63, Padova, 35121, Italy. ivano.lauriola@phd.unipd.it","institution_ids":["https://openalex.org/I138689650"]},{"raw_affiliation_string":"Fondazione Bruno Kessler, Via Sommarive 18, Trento, 38123, Italy. ivano.lauriola@phd.unipd.it","institution_ids":["https://openalex.org/I2277624104"]},{"raw_affiliation_string":"Fondazione Bruno Kessler, Trento, Italy","institution_ids":["https://openalex.org/I2277624104"]},{"raw_affiliation_string":"Department of Mathematics, University of Padova, Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036243123","display_name":"Fabio Aiolli","orcid":"https://orcid.org/0000-0002-5823-7540"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Fabio Aiolli","raw_affiliation_strings":["Department of Mathematics, University of Padova, Via Trieste 63, Padova, 35121, Italy","Department of Mathematics, University of Padova, Padova, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Padova, Via Trieste 63, Padova, 35121, Italy","institution_ids":["https://openalex.org/I138689650"]},{"raw_affiliation_string":"Department of Mathematics, University of Padova, Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073069826","display_name":"Alberto Lavelli","orcid":"https://orcid.org/0000-0002-7175-6804"},"institutions":[{"id":"https://openalex.org/I2277624104","display_name":"Fondazione Bruno Kessler","ror":"https://ror.org/01j33xk10","country_code":"IT","type":"facility","lineage":["https://openalex.org/I2277624104"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alberto Lavelli","raw_affiliation_strings":["Fondazione Bruno Kessler, Via Sommarive 18, Trento, 38123, Italy","Fondazione Bruno Kessler, Trento, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fondazione Bruno Kessler, Via Sommarive 18, Trento, 38123, Italy","institution_ids":["https://openalex.org/I2277624104"]},{"raw_affiliation_string":"Fondazione Bruno Kessler, Trento, Italy","institution_ids":["https://openalex.org/I2277624104"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025307528","display_name":"Fabio Rinaldi","orcid":"https://orcid.org/0000-0001-5718-5462"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]},{"id":"https://openalex.org/I2277624104","display_name":"Fondazione Bruno Kessler","ror":"https://ror.org/01j33xk10","country_code":"IT","type":"facility","lineage":["https://openalex.org/I2277624104"]},{"id":"https://openalex.org/I2614128279","display_name":"Dalle Molle Institute for Artificial Intelligence Research","ror":"https://ror.org/013355g38","country_code":"CH","type":"facility","lineage":["https://openalex.org/I15196421","https://openalex.org/I2614128279","https://openalex.org/I57201433"]},{"id":"https://openalex.org/I4210098931","display_name":"Quantitative BioSciences","ror":"https://ror.org/010brsj79","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210098931"]}],"countries":["CH","IT","US"],"is_corresponding":false,"raw_author_name":"Fabio Rinaldi","raw_affiliation_strings":["Dalle Molle Institute for Artificial Intelligence Research (IDSIA), Via Cantonale 2C, Manno, 6928, Svizzera","Department of Quantitative Biomedicine, University of Zurich, Andreasstrasse 15, Z\u00fcrich, 8050, Svizzera","Fondazione Bruno Kessler, Via Sommarive 18, Trento, 38123, Italy","SIB, Swiss Institute of Bioinformatics, G\u00e9nopode, Quartier UNIL-Sorge, b\u00e2timent, Lausanne, 1015, Svizzera","Dalle Molle Institute for Artificial Intelligence Research (IDSIA), Manno, Svizzera","Fondazione Bruno Kessler, Trento, Italy","Department of Quantitative Biomedicine, University of Zurich, Z\u00fcrich, Svizzera","SIB, Swiss Institute of Bioinformatics, Lausanne, Svizzera"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalle Molle Institute for Artificial Intelligence Research (IDSIA), Via Cantonale 2C, Manno, 6928, Svizzera","institution_ids":["https://openalex.org/I2614128279"]},{"raw_affiliation_string":"Department of Quantitative Biomedicine, University of Zurich, Andreasstrasse 15, Z\u00fcrich, 8050, Svizzera","institution_ids":["https://openalex.org/I4210098931"]},{"raw_affiliation_string":"Fondazione Bruno Kessler, Via Sommarive 18, Trento, 38123, Italy","institution_ids":["https://openalex.org/I2277624104"]},{"raw_affiliation_string":"SIB, Swiss Institute of Bioinformatics, G\u00e9nopode, Quartier UNIL-Sorge, b\u00e2timent, Lausanne, 1015, Svizzera","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Dalle Molle Institute for Artificial Intelligence Research (IDSIA), Manno, Svizzera","institution_ids":["https://openalex.org/I2614128279"]},{"raw_affiliation_string":"Fondazione Bruno Kessler, Trento, Italy","institution_ids":["https://openalex.org/I2277624104"]},{"raw_affiliation_string":"Department of Quantitative Biomedicine, University of Zurich, Z\u00fcrich, Svizzera","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"SIB, Swiss Institute of Bioinformatics, Lausanne, Svizzera","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5061388105"],"corresponding_institution_ids":["https://openalex.org/I138689650","https://openalex.org/I2277624104"],"apc_list":{"value":1340,"currency":"USD","value_usd":1340},"apc_paid":{"value":1665,"currency":"EUR","value_usd":1795},"fwci":0.2601,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.63562306,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"12","issue":"1","first_page":"10","last_page":"10"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9068999886512756,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9068999886512756,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.05220000073313713,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.008999999612569809,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8211755156517029},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5614299178123474},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4214558005332947},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.38866743445396423},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37027299404144287},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3375580906867981}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8211755156517029},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5614299178123474},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4214558005332947},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.38866743445396423},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37027299404144287},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3375580906867981},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s13326-021-00238-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-021-00238-0","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-021-00238-0","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:34001263","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34001263","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:doaj.org/article:a279e63e0b1742e49b9a623eb6e39414","is_oa":true,"landing_page_url":"https://doaj.org/article/a279e63e0b1742e49b9a623eb6e39414","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 12, Iss 1, Pp 1-13 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8127187","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8127187","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:oai:www.research.unipd.it:11577/3440278","is_oa":true,"landing_page_url":"https://hdl.handle.net/11577/3440278","pdf_url":null,"source":{"id":"https://openalex.org/S4306402547","display_name":"Padua Research Archive (University of Padova)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138689650","host_organization_name":"University of Padua","host_organization_lineage":["https://openalex.org/I138689650"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s13326-021-00238-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-021-00238-0","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-021-00238-0","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7599999904632568,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G4799479465","display_name":"MelanoBase","funder_award_id":"162758","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G6169222452","display_name":null,"funder_award_id":"CR30I1_162758","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3160167365.pdf","grobid_xml":"https://content.openalex.org/works/W3160167365.grobid-xml"},"referenced_works_count":60,"referenced_works":["https://openalex.org/W1510073064","https://openalex.org/W1532940542","https://openalex.org/W1614298861","https://openalex.org/W1757909678","https://openalex.org/W1901129140","https://openalex.org/W1940872118","https://openalex.org/W1995405245","https://openalex.org/W1996211074","https://openalex.org/W2012285872","https://openalex.org/W2020278455","https://openalex.org/W2020816856","https://openalex.org/W2020883978","https://openalex.org/W2033377040","https://openalex.org/W2040298461","https://openalex.org/W2060166505","https://openalex.org/W2067637119","https://openalex.org/W2091155135","https://openalex.org/W2100014056","https://openalex.org/W2101234009","https://openalex.org/W2101553882","https://openalex.org/W2103017472","https://openalex.org/W2109743529","https://openalex.org/W2114361266","https://openalex.org/W2115562276","https://openalex.org/W2123171788","https://openalex.org/W2123671373","https://openalex.org/W2134429551","https://openalex.org/W2135616521","https://openalex.org/W2138095945","https://openalex.org/W2139967559","https://openalex.org/W2142678031","https://openalex.org/W2146512693","https://openalex.org/W2158899491","https://openalex.org/W2163922914","https://openalex.org/W2169491861","https://openalex.org/W2170484170","https://openalex.org/W2239231358","https://openalex.org/W2294411959","https://openalex.org/W2296283641","https://openalex.org/W2347081127","https://openalex.org/W2397012302","https://openalex.org/W2493916176","https://openalex.org/W2496897087","https://openalex.org/W2734608416","https://openalex.org/W2743028754","https://openalex.org/W2767691613","https://openalex.org/W2857028992","https://openalex.org/W2890536775","https://openalex.org/W2911489562","https://openalex.org/W2912026815","https://openalex.org/W2913647772","https://openalex.org/W2914058237","https://openalex.org/W2942690862","https://openalex.org/W2953384591","https://openalex.org/W2963625095","https://openalex.org/W2979027112","https://openalex.org/W3002784191","https://openalex.org/W4298209689","https://openalex.org/W6675354045","https://openalex.org/W6713134421"],"related_works":["https://openalex.org/W3188962172","https://openalex.org/W2772917594","https://openalex.org/W4312825515","https://openalex.org/W4306742369","https://openalex.org/W4303457083","https://openalex.org/W2131146434","https://openalex.org/W2951359407","https://openalex.org/W4376623224","https://openalex.org/W4387849428","https://openalex.org/W3204019825"],"abstract_inverted_index":{"Abstract":[0],"Background":[1],"Named":[2],"Entity":[3],"Recognition":[4],"is":[5,16,51],"a":[6,74,100,129,175],"common":[7],"task":[8,30],"in":[9,21,31,65,207,243],"Natural":[10,37],"Language":[11,38],"Processing":[12,39],"applications,":[13],"whose":[14],"purpose":[15],"to":[17,27,137,158],"recognize":[18],"named":[19],"entities":[20],"textual":[22],"documents.":[23],"Several":[24,60],"systems":[25],"exist":[26],"solve":[28],"this":[29,171],"the":[32,52,55,66,78,94,109,139,160,196,201,204,218,230,238,244],"biomedical":[33,179],"domain,":[34,79],"based":[35,72],"on":[36,73,195],"techniques":[40],"and":[41,80,105,150,166,226],"Machine":[42],"Learning":[43],"algorithms.":[44],"A":[45],"crucial":[46],"step":[47],"of":[48,54,69,77,83,102,203,209,221,232,240],"these":[49,91],"applications":[50],"choice":[53],"representation":[56,141,242],"which":[57,70,162,182],"describes":[58],"data.":[59,107],"representations":[61,92,113,149,228],"have":[62,155],"been":[63,156],"proposed":[64,205],"literature,":[67],"some":[68],"are":[71,163],"strong":[75],"knowledge":[76],"they":[81,98,123],"consist":[82],"features":[84],"manually":[85],"defined":[86],"by":[87,145],"domain":[88,120,223],"experts.":[89],"Usually,":[90],"describe":[93],"problem":[95],"well,":[96],"but":[97,122],"require":[99,118],"lot":[101],"human":[103,119],"effort":[104],"annotated":[106],"On":[108],"other":[110],"hand,":[111],"general-purpose":[112],"like":[114],"word-embeddings":[115],"do":[116],"not":[117],"knowledge,":[121],"could":[124],"be":[125],"too":[126],"general":[127],"for":[128,178],"specific":[130],"task.":[131],"Results":[132,194],"This":[133],"paper":[134],"investigates":[135],"methods":[136],"learn":[138],"best":[140],"from":[142],"data":[143],"directly,":[144],"combining":[146],"several":[147],"knowledge-based":[148],"word":[151],"embeddings.":[152],"Two":[153],"mechanisms":[154],"considered":[157],"perform":[159],"combination,":[161],"neural":[164],"networks":[165],"Multiple":[167],"Kernel":[168],"Learning.":[169],"To":[170],"end,":[172],"we":[173],"use":[174],"hybrid":[176],"architecture":[177],"entity":[180,233],"recognition":[181],"integrates":[183],"dictionary":[184],"look-up":[185],"(also":[186],"known":[187],"as":[188],"gazetteers)":[189],"with":[190],"machine":[191],"learning":[192],"techniques.":[193],"CRAFT":[197],"corpus":[198],"clearly":[199],"show":[200,216],"benefits":[202],"algorithm":[206],"terms":[208],"F":[210],"1":[211],"score.":[212],"Conclusions":[213],"Our":[214],"experiments":[215],"that":[217],"principled":[219],"combination":[220],"general,":[222],"specific,":[224],"word-,":[225],"character-level":[227],"improves":[229],"performance":[231],"recognition.":[234],"We":[235],"also":[236],"discussed":[237],"contribution":[239],"each":[241],"final":[245],"solution.":[246]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
