{"id":"https://openalex.org/W3041159669","doi":"https://doi.org/10.1186/s13326-020-00223-z","title":"Enabling ad-hoc reuse of private data repositories through schema extraction","display_name":"Enabling ad-hoc reuse of private data repositories through schema extraction","publication_year":2020,"publication_date":"2020-07-08","ids":{"openalex":"https://openalex.org/W3041159669","doi":"https://doi.org/10.1186/s13326-020-00223-z","mag":"3041159669","pmid":"https://pubmed.ncbi.nlm.nih.gov/32641124"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-020-00223-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-020-00223-z","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-020-00223-z","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-020-00223-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036326200","display_name":"Lars Gleim","orcid":"https://orcid.org/0000-0002-3550-1847"},"institutions":[{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Lars Christoph Gleim","raw_affiliation_strings":["Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany. gleim@cs.rwth-aachen.de","Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany"],"raw_orcid":"https://orcid.org/0000-0002-3550-1847","affiliations":[{"raw_affiliation_string":"Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany. gleim@cs.rwth-aachen.de","institution_ids":["https://openalex.org/I887968799"]},{"raw_affiliation_string":"Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114549797","display_name":"Md. Rezaul Karim","orcid":"https://orcid.org/0000-0001-6804-9183"},"institutions":[{"id":"https://openalex.org/I4210110507","display_name":"Fraunhofer Institute for Applied Information Technology","ror":"https://ror.org/01ak24c12","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210110507","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Md Rezaul Karim","raw_affiliation_strings":["Fraunhofer FIT, Schloss Birlinghoven, Sankt Augustin, 53754, Germany","Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fraunhofer FIT, Schloss Birlinghoven, Sankt Augustin, 53754, Germany","institution_ids":["https://openalex.org/I4210110507"]},{"raw_affiliation_string":"Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045952382","display_name":"Lukas Zimmermann","orcid":"https://orcid.org/0000-0001-8180-9853"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lukas Zimmermann","raw_affiliation_strings":["Institute for Translational Bioinformatics, University Hospital T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Translational Bioinformatics, University Hospital T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053621010","display_name":"Oliver Kohlbacher","orcid":"https://orcid.org/0000-0003-1739-4598"},"institutions":[{"id":"https://openalex.org/I4210112458","display_name":"Max Planck Institute for Developmental Biology","ror":"https://ror.org/022jc0g24","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210112458"]},{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Oliver Kohlbacher","raw_affiliation_strings":["Applied Bioinformatics, Department of Computer Science, University of T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany","Biomolecular Interactions, Max Planck Institute for Developmental Biology, Max-Planck-Ring 5, T\u00fcbingen, 72076, Germany","Institute for Bioinformatics and Medical Informatics, University of T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany","Institute for Translational Bioinformatics, University Hospital T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany","Quantitative Biology Center, University of T\u00fcbingen, Auf der Morgenstelle 10, T\u00fcbingen, 72076, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Applied Bioinformatics, Department of Computer Science, University of T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany","institution_ids":["https://openalex.org/I8087733"]},{"raw_affiliation_string":"Biomolecular Interactions, Max Planck Institute for Developmental Biology, Max-Planck-Ring 5, T\u00fcbingen, 72076, Germany","institution_ids":["https://openalex.org/I4210112458"]},{"raw_affiliation_string":"Institute for Bioinformatics and Medical Informatics, University of T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany","institution_ids":["https://openalex.org/I8087733"]},{"raw_affiliation_string":"Institute for Translational Bioinformatics, University Hospital T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany","institution_ids":["https://openalex.org/I8087733"]},{"raw_affiliation_string":"Quantitative Biology Center, University of T\u00fcbingen, Auf der Morgenstelle 10, T\u00fcbingen, 72076, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054197674","display_name":"Holger Stenzhorn","orcid":"https://orcid.org/0000-0001-9744-174X"},"institutions":[{"id":"https://openalex.org/I169724904","display_name":"Zimmer Biomet (Netherlands)","ror":"https://ror.org/034k8cv93","country_code":"NL","type":"company","lineage":["https://openalex.org/I169724904","https://openalex.org/I4210115238"]},{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]},{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE","NL"],"is_corresponding":false,"raw_author_name":"Holger Stenzhorn","raw_affiliation_strings":["Institute for Medical Biometry, Epidemiology und Medical Informatics, Saarland University Medical Center, Kirrberger Str., Building 86, Homburg, 66421, Germany","Institute for Translational Bioinformatics, University Hospital T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Medical Biometry, Epidemiology und Medical Informatics, Saarland University Medical Center, Kirrberger Str., Building 86, Homburg, 66421, Germany","institution_ids":["https://openalex.org/I91712215","https://openalex.org/I169724904"]},{"raw_affiliation_string":"Institute for Translational Bioinformatics, University Hospital T\u00fcbingen, Sand 14, T\u00fcbingen, 72076, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071104283","display_name":"Stefan Decker","orcid":"https://orcid.org/0000-0001-6324-7164"},"institutions":[{"id":"https://openalex.org/I4210110507","display_name":"Fraunhofer Institute for Applied Information Technology","ror":"https://ror.org/01ak24c12","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210110507","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan Decker","raw_affiliation_strings":["Fraunhofer FIT, Schloss Birlinghoven, Sankt Augustin, 53754, Germany","Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fraunhofer FIT, Schloss Birlinghoven, Sankt Augustin, 53754, Germany","institution_ids":["https://openalex.org/I4210110507"]},{"raw_affiliation_string":"Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067635650","display_name":"Oya Beyan","orcid":"https://orcid.org/0000-0001-7611-3501"},"institutions":[{"id":"https://openalex.org/I4210110507","display_name":"Fraunhofer Institute for Applied Information Technology","ror":"https://ror.org/01ak24c12","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210110507","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Oya Beyan","raw_affiliation_strings":["Fraunhofer FIT, Schloss Birlinghoven, Sankt Augustin, 53754, Germany","Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fraunhofer FIT, Schloss Birlinghoven, Sankt Augustin, 53754, Germany","institution_ids":["https://openalex.org/I4210110507"]},{"raw_affiliation_string":"Informatik 5, RWTH Aachen University, Ahornstr. 55, Aachen, 52062, Germany","institution_ids":["https://openalex.org/I887968799"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5036326200"],"corresponding_institution_ids":["https://openalex.org/I887968799"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":0.2709,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.63869825,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"11","issue":"1","first_page":"6","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.5149000287055969,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.5149000287055969,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.09549999982118607,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.09319999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8573477268218994},{"id":"https://openalex.org/keywords/schema","display_name":"Schema (genetic algorithms)","score":0.6583308577537537},{"id":"https://openalex.org/keywords/reuse","display_name":"Reuse","score":0.635184645652771},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.458777517080307},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.43570032715797424},{"id":"https://openalex.org/keywords/data-extraction","display_name":"Data extraction","score":0.4133548140525818},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4087030589580536},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.39751261472702026},{"id":"https://openalex.org/keywords/medline","display_name":"MEDLINE","score":0.10032901167869568},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.07786330580711365}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8573477268218994},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.6583308577537537},{"id":"https://openalex.org/C206588197","wikidata":"https://www.wikidata.org/wiki/Q846574","display_name":"Reuse","level":2,"score":0.635184645652771},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.458777517080307},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.43570032715797424},{"id":"https://openalex.org/C2777466982","wikidata":"https://www.wikidata.org/wiki/Q5227287","display_name":"Data extraction","level":3,"score":0.4133548140525818},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4087030589580536},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.39751261472702026},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.10032901167869568},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.07786330580711365},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005240","descriptor_name":"Feasibility Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005240","descriptor_name":"Feasibility Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005240","descriptor_name":"Feasibility Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":"Q000331","qualifier_name":"legislation & jurisprudence","is_major_topic":false},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":"Q000331","qualifier_name":"legislation & jurisprudence","is_major_topic":false},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":"Q000331","qualifier_name":"legislation & jurisprudence","is_major_topic":false},{"descriptor_ui":"D018907","descriptor_name":"Privacy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018907","descriptor_name":"Privacy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018907","descriptor_name":"Privacy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1186/s13326-020-00223-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-020-00223-z","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-020-00223-z","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:32641124","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32641124","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:doaj.org/article:6ffec7730ec44da9acb9bf0f6b1cdfa3","is_oa":true,"landing_page_url":"https://doaj.org/article/6ffec7730ec44da9acb9bf0f6b1cdfa3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 11, Iss 1, Pp 1-15 (2020)","raw_type":"article"},{"id":"pmh:oai:fraunhofer.de:N-602515","is_oa":true,"landing_page_url":"http://publica.fraunhofer.de/documents/N-602515.html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400801","display_name":"Publikationsdatenbank der Fraunhofer-Gesellschaft (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Fraunhofer FIT","raw_type":"Journal Article"},{"id":"pmh:oai:publica.fraunhofer.de:publica/264416","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/264416","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"},{"id":"pmh:oai:publications.rwth-aachen.de:795574","is_oa":true,"landing_page_url":"https://publications.rwth-aachen.de/search?p=id:%22RWTH-2020-08425%22","pdf_url":null,"source":{"id":"https://openalex.org/S4306401033","display_name":"RWTH Publications (RWTH Aachen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I887968799","host_organization_name":"RWTH Aachen University","host_organization_lineage":["https://openalex.org/I887968799"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of biomedical semantics 11, 6 (2020). doi:10.1186/s13326-020-00223-z","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:publikationen.sulb.uni-saarland.de:20.500.11880/35874","is_oa":true,"landing_page_url":"http://dx.doi.org/10.22028/D291-39832","pdf_url":null,"source":{"id":"https://openalex.org/S4377196499","display_name":"Publications of the UdS (Saarland University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I91712215","host_organization_name":"Saarland University","host_organization_lineage":["https://openalex.org/I91712215"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"doc-type:article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7341611","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7341611","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"doi:10.22028/d291-39832","is_oa":true,"landing_page_url":"https://doi.org/10.22028/d291-39832","pdf_url":null,"source":{"id":"https://openalex.org/S7407052975","display_name":"Universit\u00e4t des Saarlandes","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13326-020-00223-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-020-00223-z","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-020-00223-z","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.41999998688697815}],"awards":[{"id":"https://openalex.org/G3260303105","display_name":null,"funder_award_id":"01ZZ1803K","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G3946016942","display_name":null,"funder_award_id":"01ZZ1804D","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320324232","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3041159669.pdf","grobid_xml":"https://content.openalex.org/works/W3041159669.grobid-xml"},"referenced_works_count":67,"referenced_works":["https://openalex.org/W69498482","https://openalex.org/W95851278","https://openalex.org/W112689046","https://openalex.org/W1487060125","https://openalex.org/W1547456614","https://openalex.org/W1554936603","https://openalex.org/W1590805814","https://openalex.org/W1964200019","https://openalex.org/W1993977866","https://openalex.org/W2013075925","https://openalex.org/W2021074129","https://openalex.org/W2039410797","https://openalex.org/W2052522161","https://openalex.org/W2068606814","https://openalex.org/W2070960668","https://openalex.org/W2072692971","https://openalex.org/W2104209932","https://openalex.org/W2106356140","https://openalex.org/W2111758455","https://openalex.org/W2114049512","https://openalex.org/W2121274101","https://openalex.org/W2123152121","https://openalex.org/W2128739912","https://openalex.org/W2131660156","https://openalex.org/W2146771051","https://openalex.org/W2148554370","https://openalex.org/W2159938093","https://openalex.org/W2162520370","https://openalex.org/W2163598528","https://openalex.org/W2175849758","https://openalex.org/W2196674927","https://openalex.org/W2232084723","https://openalex.org/W2248098515","https://openalex.org/W2248279559","https://openalex.org/W2265741522","https://openalex.org/W2273009367","https://openalex.org/W2281806033","https://openalex.org/W2294952475","https://openalex.org/W2302501749","https://openalex.org/W2396717456","https://openalex.org/W2398915717","https://openalex.org/W2401480211","https://openalex.org/W2404369708","https://openalex.org/W2405275595","https://openalex.org/W2407779602","https://openalex.org/W2544902556","https://openalex.org/W2547205273","https://openalex.org/W2571754233","https://openalex.org/W2575548324","https://openalex.org/W2577433652","https://openalex.org/W2584060050","https://openalex.org/W2604011835","https://openalex.org/W2614473624","https://openalex.org/W2615202182","https://openalex.org/W2615599337","https://openalex.org/W2773787581","https://openalex.org/W2889844984","https://openalex.org/W2894794416","https://openalex.org/W2995703487","https://openalex.org/W4231142816","https://openalex.org/W4239696231","https://openalex.org/W6606104288","https://openalex.org/W6629025635","https://openalex.org/W6732332434","https://openalex.org/W6754146182","https://openalex.org/W7006046120","https://openalex.org/W7014291074"],"related_works":["https://openalex.org/W2384475851","https://openalex.org/W2000444236","https://openalex.org/W2353602216","https://openalex.org/W2367078749","https://openalex.org/W2381798600","https://openalex.org/W1910583078","https://openalex.org/W2351618306","https://openalex.org/W2999162218","https://openalex.org/W1537443268","https://openalex.org/W2390634956"],"abstract_inverted_index":{"BACKGROUND:":[0],"Sharing":[1],"sensitive":[2,36],"data":[3,52,124,165,173,191,221],"across":[4],"organizational":[5],"boundaries":[6],"is":[7,102,208],"often":[8],"significantly":[9],"limited":[10],"by":[11],"legal":[12],"and":[13,34,75,79,109,139,163,175,195,204,226],"ethical":[14],"restrictions.":[15],"Regulations":[16],"such":[17,41,116],"as":[18,42],"the":[19,30,43,59,97,112,123,144,147,153,169,181,229,235],"EU":[20],"General":[21],"Data":[22],"Protection":[23],"Rules":[24],"(GDPR)":[25],"impose":[26],"strict":[27],"requirements":[28],"concerning":[29],"protection":[31],"of":[32,67,115,137,146,157,172,190,220,231],"personal":[33],"privacy":[35],"data.":[37,63,99],"Therefore":[38],"new":[39],"approaches,":[40],"Personal":[44],"Health":[45],"Train":[46],"initiative,":[47],"are":[48],"emerging":[49],"to":[50,61,96],"utilize":[51],"right":[53],"in":[54,118,196,234],"their":[55],"original":[56],"repositories,":[57],"circumventing":[58],"need":[60],"transfer":[62],"RESULTS:":[64],"Circumventing":[65],"limitations":[66],"previous":[68],"systems,":[69],"this":[70,185],"paper":[71],"proposes":[72],"a":[73,119,134,201,206],"configurable":[74,135],"automated":[76],"schema":[77,154,166,203],"extraction":[78],"publishing":[80,164],"approach,":[81],"which":[82],"enables":[83],"ad-hoc":[84],"SPARQL":[85,158],"query":[86],"formulation":[87],"against":[88],"RDF":[89],"triple":[90],"stores":[91],"without":[92],"requiring":[93],"direct":[94],"access":[95],"private":[98,193],"The":[100],"approach":[101,186],"compatible":[103],"with":[104,128,180],"existing":[105],"Semantic":[106],"Web-based":[107],"technologies":[108],"allows":[110],"for":[111],"subsequent":[113],"execution":[114],"queries":[117],"safe":[120],"setting":[121],"under":[122],"provider's":[125],"control.":[126],"Evaluation":[127],"four":[129],"distinct":[130],"datasets":[131],"shows":[132],"that":[133],"amount":[136],"concise":[138],"task-relevant":[140],"schema,":[141],"closely":[142],"describing":[143],"structure":[145],"underlying":[148],"data,":[149],"was":[150],"derived,":[151],"enabling":[152],"introspection-assisted":[155,170],"authoring":[156],"queries.":[159,177],"CONCLUSIONS:":[160],"Automatically":[161],"extracting":[162],"can":[167,187],"enable":[168,188],"creation":[171],"selection":[174],"integration":[176],"In":[178],"conjunction":[179],"presented":[182],"system":[183],"architecture,":[184],"reuse":[189,219],"from":[192,222],"repositories":[194],"settings":[197],"where":[198],"agreeing":[199],"upon":[200],"shared":[202],"encoding":[205],"priori":[207],"infeasible.":[209],"As":[210],"such,":[211],"it":[212],"could":[213],"provide":[214],"an":[215],"important":[216],"step":[217],"towards":[218,228],"previously":[223],"inaccessible":[224],"sources":[225],"thus":[227],"proliferation":[230],"data-driven":[232],"methods":[233],"biomedical":[236],"domain.":[237]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
