{"id":"https://openalex.org/W2986913023","doi":"https://doi.org/10.1186/s13326-019-0214-4","title":"Natural language processing for disease phenotyping in UK primary care records for research: a pilot study in myocardial infarction and death","display_name":"Natural language processing for disease phenotyping in UK primary care records for research: a pilot study in myocardial infarction and death","publication_year":2019,"publication_date":"2019-11-01","ids":{"openalex":"https://openalex.org/W2986913023","doi":"https://doi.org/10.1186/s13326-019-0214-4","mag":"2986913023","pmid":"https://pubmed.ncbi.nlm.nih.gov/31711543"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-019-0214-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-019-0214-4","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-019-0214-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-019-0214-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070940290","display_name":"Anoop D Shah","orcid":"https://orcid.org/0000-0002-8907-5724"},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I1340918713","display_name":"University College London Hospitals NHS Foundation Trust","ror":"https://ror.org/042fqyp44","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I1340918713"]},{"id":"https://openalex.org/I34931013","display_name":"National Institute for Health and Care Research","ror":"https://ror.org/0187kwz08","country_code":"GB","type":"government","lineage":["https://openalex.org/I34931013"]},{"id":"https://openalex.org/I4210142469","display_name":"Health Data Research UK","ror":"https://ror.org/04rtjaj74","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I4210142469"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Anoop D. Shah","raw_affiliation_strings":["Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK. anoop@doctors.org.uk","Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA, UK. anoop@doctors.org.uk","The National Institute for Health Research University College London Hospitals Biomedical Research Centre, University College London, 222 Euston Road, London, NW1 2DA, UK. anoop@doctors.org.uk","University College London Hospitals NHS Foundation Trust, 235 Euston Road, London, NW1 2BU, UK. anoop@doctors.org.uk","Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK. anoop@doctors.org.uk","institution_ids":["https://openalex.org/I4210142469","https://openalex.org/I45129253"]},{"raw_affiliation_string":"Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA, UK. anoop@doctors.org.uk","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"The National Institute for Health Research University College London Hospitals Biomedical Research Centre, University College London, 222 Euston Road, London, NW1 2DA, UK. anoop@doctors.org.uk","institution_ids":["https://openalex.org/I34931013","https://openalex.org/I45129253"]},{"raw_affiliation_string":"University College London Hospitals NHS Foundation Trust, 235 Euston Road, London, NW1 2BU, UK. anoop@doctors.org.uk","institution_ids":["https://openalex.org/I1340918713","https://openalex.org/I45129253"]},{"raw_affiliation_string":"Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I124357947","https://openalex.org/I4210142469","https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064704692","display_name":"Emily S. Bailey","orcid":"https://orcid.org/0000-0003-1292-0771"},"institutions":[{"id":"https://openalex.org/I1340918713","display_name":"University College London Hospitals NHS Foundation Trust","ror":"https://ror.org/042fqyp44","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I1340918713"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Emily Bailey","raw_affiliation_strings":["University College London Hospitals NHS Foundation Trust, 235 Euston Road, London, NW1 2BU, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University College London Hospitals NHS Foundation Trust, 235 Euston Road, London, NW1 2BU, UK","institution_ids":["https://openalex.org/I1340918713","https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057606556","display_name":"Tim Williams","orcid":"https://orcid.org/0000-0002-8996-5401"},"institutions":[{"id":"https://openalex.org/I4210107297","display_name":"Clinical Practice Research Datalink","ror":"https://ror.org/01h3bmp72","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4210107297"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Tim Williams","raw_affiliation_strings":["Clinical Practice Research Datalink, Medicines and Healthcare products Regulatory Agency, 10 South Colonnade, London, E14 4PU, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical Practice Research Datalink, Medicines and Healthcare products Regulatory Agency, 10 South Colonnade, London, E14 4PU, UK","institution_ids":["https://openalex.org/I4210107297"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073010916","display_name":"Spiros Denaxas","orcid":"https://orcid.org/0000-0001-9612-7791"},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I34931013","display_name":"National Institute for Health and Care Research","ror":"https://ror.org/0187kwz08","country_code":"GB","type":"government","lineage":["https://openalex.org/I34931013"]},{"id":"https://openalex.org/I4210142469","display_name":"Health Data Research UK","ror":"https://ror.org/04rtjaj74","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I4210142469"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Spiros Denaxas","raw_affiliation_strings":["Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK","Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA, UK","The National Institute for Health Research University College London Hospitals Biomedical Research Centre, University College London, 222 Euston Road, London, NW1 2DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I124357947","https://openalex.org/I4210142469","https://openalex.org/I45129253"]},{"raw_affiliation_string":"Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"The National Institute for Health Research University College London Hospitals Biomedical Research Centre, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I34931013","https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066918469","display_name":"Richard Dobson","orcid":"https://orcid.org/0000-0003-4224-9245"},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]},{"id":"https://openalex.org/I34931013","display_name":"National Institute for Health and Care Research","ror":"https://ror.org/0187kwz08","country_code":"GB","type":"government","lineage":["https://openalex.org/I34931013"]},{"id":"https://openalex.org/I4210142469","display_name":"Health Data Research UK","ror":"https://ror.org/04rtjaj74","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I4210142469"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Richard Dobson","raw_affiliation_strings":["Department of Biostatistics and Health Informatics, King's College London, De Crespigny Park, Denmark Hill, London, SE5 8AF, UK","Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK","Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA, UK","The National Institute for Health Research University College London Hospitals Biomedical Research Centre, University College London, 222 Euston Road, London, NW1 2DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics and Health Informatics, King's College London, De Crespigny Park, Denmark Hill, London, SE5 8AF, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I124357947","https://openalex.org/I4210142469","https://openalex.org/I45129253"]},{"raw_affiliation_string":"Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"The National Institute for Health Research University College London Hospitals Biomedical Research Centre, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I34931013","https://openalex.org/I45129253"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101881419","display_name":"Harry Hemingway","orcid":"https://orcid.org/0000-0003-2279-0624"},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I34931013","display_name":"National Institute for Health and Care Research","ror":"https://ror.org/0187kwz08","country_code":"GB","type":"government","lineage":["https://openalex.org/I34931013"]},{"id":"https://openalex.org/I4210142469","display_name":"Health Data Research UK","ror":"https://ror.org/04rtjaj74","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I4210142469"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Harry Hemingway","raw_affiliation_strings":["Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK","Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA, UK","The National Institute for Health Research University College London Hospitals Biomedical Research Centre, University College London, 222 Euston Road, London, NW1 2DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Health Data Research UK London, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I124357947","https://openalex.org/I4210142469","https://openalex.org/I45129253"]},{"raw_affiliation_string":"Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"The National Institute for Health Research University College London Hospitals Biomedical Research Centre, University College London, 222 Euston Road, London, NW1 2DA, UK","institution_ids":["https://openalex.org/I34931013","https://openalex.org/I45129253"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5070940290"],"corresponding_institution_ids":["https://openalex.org/I124357947","https://openalex.org/I1340918713","https://openalex.org/I34931013","https://openalex.org/I4210142469","https://openalex.org/I45129253"],"apc_list":{"value":1340,"currency":"USD","value_usd":1340},"apc_paid":{"value":1340,"currency":"USD","value_usd":1340},"fwci":1.9012,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.8925499,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"10","issue":"S1","first_page":"20","last_page":"20"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.42649999260902405,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.42649999260902405,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.31369999051094055,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11636","display_name":"Artificial Intelligence in Healthcare and Education","score":0.03869999945163727,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/myocardial-infarction","display_name":"Myocardial infarction","score":0.734755277633667},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.7031705975532532},{"id":"https://openalex.org/keywords/medical-diagnosis","display_name":"Medical diagnosis","score":0.6406685709953308},{"id":"https://openalex.org/keywords/cause-of-death","display_name":"Cause of death","score":0.526997983455658},{"id":"https://openalex.org/keywords/medical-emergency","display_name":"Medical emergency","score":0.5173170566558838},{"id":"https://openalex.org/keywords/medical-record","display_name":"Medical record","score":0.4915843904018402},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.42996782064437866},{"id":"https://openalex.org/keywords/chest-pain","display_name":"Chest pain","score":0.41088002920150757},{"id":"https://openalex.org/keywords/emergency-medicine","display_name":"Emergency medicine","score":0.36587101221084595},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.2845810651779175},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.14127802848815918}],"concepts":[{"id":"https://openalex.org/C500558357","wikidata":"https://www.wikidata.org/wiki/Q12152","display_name":"Myocardial infarction","level":2,"score":0.734755277633667},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.7031705975532532},{"id":"https://openalex.org/C534262118","wikidata":"https://www.wikidata.org/wiki/Q177719","display_name":"Medical diagnosis","level":2,"score":0.6406685709953308},{"id":"https://openalex.org/C29374701","wikidata":"https://www.wikidata.org/wiki/Q1931388","display_name":"Cause of death","level":3,"score":0.526997983455658},{"id":"https://openalex.org/C545542383","wikidata":"https://www.wikidata.org/wiki/Q2751242","display_name":"Medical emergency","level":1,"score":0.5173170566558838},{"id":"https://openalex.org/C195910791","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Medical record","level":2,"score":0.4915843904018402},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.42996782064437866},{"id":"https://openalex.org/C2778704086","wikidata":"https://www.wikidata.org/wiki/Q693058","display_name":"Chest pain","level":2,"score":0.41088002920150757},{"id":"https://openalex.org/C194828623","wikidata":"https://www.wikidata.org/wiki/Q2861470","display_name":"Emergency medicine","level":1,"score":0.36587101221084595},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.2845810651779175},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.14127802848815918}],"mesh":[{"descriptor_ui":"D006113","descriptor_name":"United Kingdom","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006113","descriptor_name":"United Kingdom","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006113","descriptor_name":"United Kingdom","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006113","descriptor_name":"United Kingdom","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006113","descriptor_name":"United Kingdom","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009203","descriptor_name":"Myocardial Infarction","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D009203","descriptor_name":"Myocardial Infarction","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D009203","descriptor_name":"Myocardial Infarction","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D009203","descriptor_name":"Myocardial Infarction","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D009203","descriptor_name":"Myocardial Infarction","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010865","descriptor_name":"Pilot Projects","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010865","descriptor_name":"Pilot Projects","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010865","descriptor_name":"Pilot Projects","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010865","descriptor_name":"Pilot Projects","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010865","descriptor_name":"Pilot Projects","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011320","descriptor_name":"Primary Health Care","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D011320","descriptor_name":"Primary Health Care","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D011320","descriptor_name":"Primary Health Care","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D011320","descriptor_name":"Primary Health Care","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D011320","descriptor_name":"Primary Health Care","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1186/s13326-019-0214-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-019-0214-4","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-019-0214-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:31711543","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31711543","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:kclpure.kcl.ac.uk:publications/4db951e2-02aa-417c-9976-4e83c9e2cfd3","is_oa":true,"landing_page_url":"https://kclpure.kcl.ac.uk/portal/en/publications/4db951e2-02aa-417c-9976-4e83c9e2cfd3","pdf_url":null,"source":{"id":"https://openalex.org/S4306400216","display_name":"Research Portal (King's College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183935753","host_organization_name":"King's College London","host_organization_lineage":["https://openalex.org/I183935753"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Shah, A D, Bailey, E, Williams, T, Denaxas, S, Dobson, R & Hemingway, H 2019, 'Natural language processing for disease phenotyping in UK primary care records for research : a pilot study in myocardial infarction and death', Journal of biomedical semantics, vol. 10, 20. https://doi.org/10.1186/s13326-019-0214-4","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:07090805c9bc4b48a301a7720db6e125","is_oa":true,"landing_page_url":"https://doaj.org/article/07090805c9bc4b48a301a7720db6e125","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 10, Iss S1, Pp 1-10 (2019)","raw_type":"article"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10086260","is_oa":false,"landing_page_url":"https://discovery.ucl.ac.uk/id/eprint/10086260/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics , 10 , Article 20. (2019)","raw_type":"Article"},{"id":"pmh:oai:europepmc.org:5815359","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6849160","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13326-019-0214-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-019-0214-4","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-019-0214-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.4699999988079071}],"awards":[{"id":"https://openalex.org/G2107972360","display_name":null,"funder_award_id":"MR/K006584/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G304181883","display_name":null,"funder_award_id":"ES/L007517/1","funder_id":"https://openalex.org/F4320334630","funder_display_name":"Economic and Social Research Council"},{"id":"https://openalex.org/G3377197684","display_name":"Improving the quality of care of patients with angina and heart attack","funder_award_id":"RP-PG-0407-10314","funder_id":"https://openalex.org/F4320319990","funder_display_name":"National Institute for Health and Care Research"},{"id":"https://openalex.org/G4547791843","display_name":null,"funder_award_id":"TU/ASG/R-SPEH-105","funder_id":"https://openalex.org/F4320313467","funder_display_name":"Alan Turing Institute"},{"id":"https://openalex.org/G6364459132","display_name":"Healtex: UK Healthcare Text Analytics Research Network","funder_award_id":"EP/N027280/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G6507636021","display_name":null,"funder_award_id":"1940103","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G6817858081","display_name":"Administrative Data Research Centre, England (ADRCE)","funder_award_id":"ES/L007517/1","funder_id":"https://openalex.org/F4320334630","funder_display_name":"Economic and Social Research Council"},{"id":"https://openalex.org/G8514922535","display_name":null,"funder_award_id":"0938/30/Z/10/Z","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G85687723","display_name":null,"funder_award_id":"EP/N027280/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G8974814185","display_name":null,"funder_award_id":"086091/Z/08/Z","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320313467","display_name":"Alan Turing Institute","ror":"https://ror.org/035dkdb55"},{"id":"https://openalex.org/F4320319990","display_name":"National Institute for Health and Care Research","ror":"https://ror.org/0187kwz08"},{"id":"https://openalex.org/F4320319992","display_name":"British Heart Foundation","ror":"https://ror.org/02wdwnk04"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"},{"id":"https://openalex.org/F4320334630","display_name":"Economic and Social Research Council","ror":"https://ror.org/03n0ht308"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2986913023.pdf","grobid_xml":"https://content.openalex.org/works/W2986913023.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W295710475","https://openalex.org/W1602694398","https://openalex.org/W1880985058","https://openalex.org/W1963737364","https://openalex.org/W1984910136","https://openalex.org/W2046821041","https://openalex.org/W2065357162","https://openalex.org/W2099846538","https://openalex.org/W2105561497","https://openalex.org/W2108018401","https://openalex.org/W2122195676","https://openalex.org/W2130156374","https://openalex.org/W2135803349","https://openalex.org/W2138162199","https://openalex.org/W2146089916","https://openalex.org/W2163589808","https://openalex.org/W2168001117","https://openalex.org/W2236169403","https://openalex.org/W2273556505","https://openalex.org/W2290646566","https://openalex.org/W2417984089","https://openalex.org/W2491107951","https://openalex.org/W2593739814","https://openalex.org/W2742102148","https://openalex.org/W2911964244"],"related_works":["https://openalex.org/W4249377076","https://openalex.org/W4210389441","https://openalex.org/W2395241803","https://openalex.org/W2003211637","https://openalex.org/W2021488205","https://openalex.org/W2604451061","https://openalex.org/W2418110971","https://openalex.org/W2806095031","https://openalex.org/W2245747428","https://openalex.org/W2043241239"],"abstract_inverted_index":{"BACKGROUND:":[0],"Free":[1],"text":[2,39,57,150,165,209,295,309],"in":[3,40,58,151,219,234,249,252,257,261,265,279,310,337],"electronic":[4,338],"health":[5,19,339],"records":[6,313,340],"(EHR)":[7],"may":[8],"contain":[9],"additional":[10],"phenotypic":[11],"information":[12,65,316],"beyond":[13],"structured":[14,240],"(coded)":[15],"information.":[16,47],"For":[17],"major":[18],"events":[20],"-":[21,26],"heart":[22],"attack":[23],"and":[24,77,79,116,129,177,197,229,260,282,293,328],"death":[25,118,245,278,284],"there":[27],"is":[28,318],"a":[29,134,235],"lack":[30],"of":[31,55,64,81,83,112,183,195,207,214,244,270,277,297,342],"studies":[32],"evaluating":[33],"the":[34,41,53,62,87,98,109,117,139,152,175,181,202,211,220,254,274,283],"extent":[35],"to":[36,51,61,105,147,161,223,227,332],"which":[37,92],"free":[38,56,149,208,266,294,308],"primary":[42,59,94,153,250,280,311],"care":[43,60,95,154,281,312],"record":[44,155],"might":[45,344],"add":[46],"Our":[48],"objectives":[49],"were":[50],"describe":[52],"contribution":[54],"recording":[63,80],"about":[66],"myocardial":[67,203],"infarction":[68,204],"(MI),":[69],"including":[70],"subtype,":[71],"left":[72],"ventricular":[73],"function,":[74],"laboratory":[75],"results":[76,327],"symptoms;":[78],"cause":[82,255,276],"death.":[84,184,298],"We":[85,132,163,186],"used":[86],"CALIBER":[88,121],"EHR":[89],"research":[90,322],"platform":[91],"contains":[93,314],"data":[96,158,241,259,336],"from":[97,201,225],"Clinical":[99],"Practice":[100],"Research":[101],"Datalink":[102],"(CPRD)":[103],"linked":[104],"hospital":[106],"admission":[107],"data,":[108],"MINAP":[110],"registry":[111],"acute":[113],"coronary":[114],"syndromes":[115],"registry.":[119],"In":[120],"we":[122],"randomly":[123],"selected":[124],"2000":[125],"patients":[126,215,238,271,301],"with":[127,216],"MI":[128,224,232,304],"1800":[130],"deaths.":[131],"implemented":[133],"rule-based":[135],"natural":[136],"language":[137],"engine,":[138],"Freetext":[140],"Matching":[141],"Algorithm,":[142],"on":[143,178],"site":[144],"at":[145],"CPRD":[146],"analyse":[148],"without":[156],"raw":[157],"being":[159],"released":[160],"researchers.":[162],"analysed":[164],"recorded":[166,212,248],"within":[167],"90":[168,172],"days":[169,173],"before":[170],"or":[171,179,305],"after":[174,180],"MI,":[176],"date":[182],"RESULTS:":[185],"extracted":[187],"10,927":[188],"diagnoses,":[189],"3658":[190],"test":[191],"results,":[192],"3313":[193],"statements":[194],"negation,":[196],"850":[198],"suspected":[199],"diagnoses":[200],"patients.":[205],"Inclusion":[206],"increased":[210],"proportion":[213],"chest":[217],"pain":[218],"week":[221],"prior":[222],"19":[226],"27%,":[228],"differentiated":[230],"between":[231,291],"subtypes":[233],"quarter":[236],"more":[237],"than":[239],"alone.":[242],"Cause":[243],"was":[246,256,264],"incompletely":[247],"care;":[251],"36%":[253],"coded":[258,292],"21%":[262],"it":[263],"text.":[267],"Only":[268],"47%":[269],"had":[272],"exactly":[273],"same":[275],"registry,":[285],"but":[286],"this":[287],"did":[288],"not":[289],"differ":[290],"causes":[296],"CONCLUSIONS:":[299],"Among":[300],"who":[302],"suffer":[303],"die,":[306],"unstructured":[307,335],"much":[315],"that":[317],"potentially":[319],"useful":[320],"for":[321],"such":[323],"as":[324],"symptoms,":[325],"investigation":[326],"specific":[329],"diagnoses.":[330],"Access":[331],"large":[333],"scale":[334],"(millions":[341],"patients)":[343],"yield":[345],"important":[346],"insights.":[347]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
