{"id":"https://openalex.org/W2892229719","doi":"https://doi.org/10.1186/s13326-018-0189-6","title":"Using predicate and provenance information from a knowledge graph for drug efficacy screening","display_name":"Using predicate and provenance information from a knowledge graph for drug efficacy screening","publication_year":2018,"publication_date":"2018-09-06","ids":{"openalex":"https://openalex.org/W2892229719","doi":"https://doi.org/10.1186/s13326-018-0189-6","mag":"2892229719","pmid":"https://pubmed.ncbi.nlm.nih.gov/30189889"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-018-0189-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-018-0189-6","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-018-0189-6","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-018-0189-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049595091","display_name":"Wytze J. Vlietstra","orcid":"https://orcid.org/0000-0002-1096-8563"},"institutions":[{"id":"https://openalex.org/I2801952686","display_name":"Erasmus MC","ror":"https://ror.org/018906e22","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I2801952686"]},{"id":"https://openalex.org/I913958620","display_name":"Erasmus University Rotterdam","ror":"https://ror.org/057w15z03","country_code":"NL","type":"education","lineage":["https://openalex.org/I913958620"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Wytze J. Vlietstra","raw_affiliation_strings":["Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands. w.vlietstra@erasmusmc.nl","Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands"],"raw_orcid":"https://orcid.org/0000-0002-1096-8563","affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands. w.vlietstra@erasmusmc.nl","institution_ids":["https://openalex.org/I2801952686","https://openalex.org/I913958620"]},{"raw_affiliation_string":"Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001224245","display_name":"Rein Vos","orcid":"https://orcid.org/0000-0002-5034-3568"},"institutions":[{"id":"https://openalex.org/I34352273","display_name":"Maastricht University","ror":"https://ror.org/02jz4aj89","country_code":"NL","type":"education","lineage":["https://openalex.org/I34352273"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Rein Vos","raw_affiliation_strings":["Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands","Department of Methodology and Statistics, Maastricht University, Maastricht, 6200, MD, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands","institution_ids":[]},{"raw_affiliation_string":"Department of Methodology and Statistics, Maastricht University, Maastricht, 6200, MD, the Netherlands","institution_ids":["https://openalex.org/I34352273"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012230488","display_name":"Anneke M. Sijbers","orcid":null},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I4210109357","display_name":"Radboud Institute for Molecular Life Sciences","ror":"https://ror.org/01yb10j39","country_code":"NL","type":"facility","lineage":["https://openalex.org/I145872427","https://openalex.org/I4210109357"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Anneke M. Sijbers","raw_affiliation_strings":["Centre for Molecular and Biomolecular Informatics, Radboudumc, Nijmegen, 6525, GA, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, Radboudumc, Nijmegen, 6525, GA, the Netherlands","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210109357"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053857782","display_name":"Erik M. van Mulligen","orcid":"https://orcid.org/0000-0003-1377-9386"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Erik M. van Mulligen","raw_affiliation_strings":["Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005077862","display_name":"Jan A. Kors","orcid":"https://orcid.org/0000-0002-4929-026X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jan A. Kors","raw_affiliation_strings":["Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, Erasmus University Medical Centre, Rotterdam, 3015, GE, the Netherlands","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5049595091"],"corresponding_institution_ids":["https://openalex.org/I2801952686","https://openalex.org/I913958620"],"apc_list":{"value":1340,"currency":"USD","value_usd":1340},"apc_paid":{"value":1340,"currency":"USD","value_usd":1340},"fwci":0.6592,"has_fulltext":true,"cited_by_count":21,"citation_normalized_percentile":{"value":0.67166136,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"9","issue":"1","first_page":"23","last_page":"23"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.6406000256538391,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.6406000256538391,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.14740000665187836,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.12240000069141388,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/predicate","display_name":"Predicate (mathematical logic)","score":0.8023004531860352},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7417744994163513},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.4917910397052765},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3958895802497864},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.37315523624420166},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.35490214824676514}],"concepts":[{"id":"https://openalex.org/C140146324","wikidata":"https://www.wikidata.org/wiki/Q1144319","display_name":"Predicate (mathematical logic)","level":2,"score":0.8023004531860352},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7417744994163513},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.4917910397052765},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3958895802497864},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37315523624420166},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.35490214824676514},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005188","descriptor_name":"False Negative Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005188","descriptor_name":"False Negative Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005188","descriptor_name":"False Negative Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":13,"locations":[{"id":"doi:10.1186/s13326-018-0189-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-018-0189-6","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-018-0189-6","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:30189889","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30189889","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:cris.maastrichtuniversity.nl:openaire/3ac325ab-fcdc-4db7-b796-bdc8ab8bf283","is_oa":true,"landing_page_url":"https://cris.maastrichtuniversity.nl/en/publications/3ac325ab-fcdc-4db7-b796-bdc8ab8bf283","pdf_url":null,"source":{"id":"https://openalex.org/S4306402616","display_name":"Research Publications (Maastricht University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I34352273","host_organization_name":"Maastricht University","host_organization_lineage":["https://openalex.org/I34352273"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Vlietstra, W J, Vos, R, Sijbers, A M, van Mulligen, E M & Kors, J A 2018, 'Using predicate and provenance information from a knowledge graph for drug efficacy screening', Journal of biomedical semantics, vol. 9, no. 1, 23. https://doi.org/10.1186/s13326-018-0189-6","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:eur:oai:repub.eur.nl:110196","is_oa":true,"landing_page_url":"http://hdl.handle.net/1765/110196","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, 9(1)","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:2e8e6e8eef204dd1a4a834b4091c4343","is_oa":false,"landing_page_url":"https://doaj.org/article/2e8e6e8eef204dd1a4a834b4091c4343","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 9, Iss 1, Pp 1-10 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5081449","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6127943","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6127943","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6127943","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:oai:pure.eur.nl:datasets/2efc6227-83ff-4502-a794-8acf94c9cab9","is_oa":true,"landing_page_url":"https://figshare.com/collections/Using_predicate_and_provenance_information_from_a_knowledge_graph_for_drug_efficacy_screening/4224056/1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401266","display_name":"EUR Research Repository (Erasmus University Rotterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I913958620","host_organization_name":"Erasmus University Rotterdam","host_organization_lineage":["https://openalex.org/I913958620"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pure.eur.nl:datasets/308110a1-9b36-456c-a1b5-9a169b27bbbb","is_oa":true,"landing_page_url":"https://figshare.com/collections/Using_predicate_and_provenance_information_from_a_knowledge_graph_for_drug_efficacy_screening/4224056","pdf_url":null,"source":{"id":"https://openalex.org/S4306401266","display_name":"EUR Research Repository (Erasmus University Rotterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I913958620","host_organization_name":"Erasmus University Rotterdam","host_organization_lineage":["https://openalex.org/I913958620"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pure.eur.nl:openaire_cris_products/2efc6227-83ff-4502-a794-8acf94c9cab9","is_oa":true,"landing_page_url":"https://pure.eur.nl/en/datasets/2efc6227-83ff-4502-a794-8acf94c9cab9","pdf_url":null,"source":{"id":"https://openalex.org/S4306401266","display_name":"EUR Research Repository (Erasmus University Rotterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I913958620","host_organization_name":"Erasmus University Rotterdam","host_organization_lineage":["https://openalex.org/I913958620"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pure.eur.nl:openaire_cris_products/308110a1-9b36-456c-a1b5-9a169b27bbbb","is_oa":true,"landing_page_url":"https://pure.eur.nl/en/datasets/308110a1-9b36-456c-a1b5-9a169b27bbbb","pdf_url":null,"source":{"id":"https://openalex.org/S4306401266","display_name":"EUR Research Repository (Erasmus University Rotterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I913958620","host_organization_name":"Erasmus University Rotterdam","host_organization_lineage":["https://openalex.org/I913958620"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"pmh:oai:pure.eur.nl:openaire_cris_publications/5ed9fea0-0d06-48de-acd7-8d00e986c770","is_oa":true,"landing_page_url":"https://pure.eur.nl/en/publications/5ed9fea0-0d06-48de-acd7-8d00e986c770","pdf_url":null,"source":{"id":"https://openalex.org/S4306401266","display_name":"EUR Research Repository (Erasmus University Rotterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I913958620","host_organization_name":"Erasmus University Rotterdam","host_organization_lineage":["https://openalex.org/I913958620"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Vlietstra , W , Vos , R , Sijbers , AM , van Mulligen , E &amp; Kors , J 2018 , ' Using predicate and provenance information from a knowledge graph for drug efficacy screening ' , Journal of Biomedical Semantics , vol. 9 , 23 . https://doi.org/10.1186/s13326-018-0189-6","raw_type":"article"},{"id":"pmh:oai:repub.eur.nl:110196","is_oa":true,"landing_page_url":"http://repub.eur.nl/pub/110196","pdf_url":null,"source":{"id":"https://openalex.org/S4377196287","display_name":"RePub (Erasmus University Rotterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I913958620","host_organization_name":"Erasmus University Rotterdam","host_organization_lineage":["https://openalex.org/I913958620"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics vol. 9 no. 1","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s13326-018-0189-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-018-0189-6","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-018-0189-6","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.6200000047683716}],"awards":[{"id":"https://openalex.org/G538325419","display_name":null,"funder_award_id":"ODEX project, 21002-NWO-ODEX 650.002.002","funder_id":"https://openalex.org/F4320321800","funder_display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek"},{"id":"https://openalex.org/G5660943735","display_name":null,"funder_award_id":"21002-NWO-ODEX 650.002.002","funder_id":"https://openalex.org/F4320321800","funder_display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek"},{"id":"https://openalex.org/G7079531307","display_name":"The 2023 consensus consultation for diagnosis and management of adult chronic nonbacterial osteomyelitis (CNO)/SAPHO syndrome","funder_award_id":"21002","funder_id":"https://openalex.org/F4320321800","funder_display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek"},{"id":"https://openalex.org/G8663411248","display_name":null,"funder_award_id":"650.002.002","funder_id":"https://openalex.org/F4320321800","funder_display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek"}],"funders":[{"id":"https://openalex.org/F4320321800","display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","ror":"https://ror.org/04jsz6e67"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2892229719.pdf","grobid_xml":"https://content.openalex.org/works/W2892229719.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W273955616","https://openalex.org/W1023993098","https://openalex.org/W1241659441","https://openalex.org/W1831050183","https://openalex.org/W1968385806","https://openalex.org/W1970701118","https://openalex.org/W1976526581","https://openalex.org/W1998898494","https://openalex.org/W2003134712","https://openalex.org/W2006617902","https://openalex.org/W2028133290","https://openalex.org/W2028492424","https://openalex.org/W2038849531","https://openalex.org/W2042238661","https://openalex.org/W2052271101","https://openalex.org/W2056782561","https://openalex.org/W2068234084","https://openalex.org/W2084254228","https://openalex.org/W2103368657","https://openalex.org/W2106525823","https://openalex.org/W2108141605","https://openalex.org/W2109429447","https://openalex.org/W2118306023","https://openalex.org/W2121111666","https://openalex.org/W2121127799","https://openalex.org/W2122842609","https://openalex.org/W2127451705","https://openalex.org/W2129136643","https://openalex.org/W2132979680","https://openalex.org/W2137632714","https://openalex.org/W2138427043","https://openalex.org/W2148502410","https://openalex.org/W2148757128","https://openalex.org/W2152415104","https://openalex.org/W2153280946","https://openalex.org/W2155653793","https://openalex.org/W2155699197","https://openalex.org/W2170962119","https://openalex.org/W2196234005","https://openalex.org/W2198001326","https://openalex.org/W2263739890","https://openalex.org/W2341413119","https://openalex.org/W2341574236","https://openalex.org/W2486409836","https://openalex.org/W2537679995","https://openalex.org/W2553570933","https://openalex.org/W2558217333","https://openalex.org/W2562531153","https://openalex.org/W2572147858","https://openalex.org/W2620710997","https://openalex.org/W2626986735","https://openalex.org/W2949311246","https://openalex.org/W2996986275"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W4387369504","https://openalex.org/W3046775127","https://openalex.org/W4394896187","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W3107602296","https://openalex.org/W4364306694","https://openalex.org/W4312192474"],"abstract_inverted_index":{"BACKGROUND:":[0],"Biomedical":[1],"knowledge":[2,19],"graphs":[3,58],"have":[4,59,74],"become":[5],"important":[6],"tools":[7],"to":[8,45,62,86,194],"computationally":[9],"analyse":[10],"the":[11,25,28,46,49,95,109,120,152],"comprehensive":[12],"body":[13],"of":[14,43,48,98,112,156,181],"biomedical":[15],"knowledge.":[16],"They":[17],"represent":[18],"as":[20],"subject-predicate-object":[21],"triples,":[22],"in":[23],"which":[24,41],"predicate":[26,77,99,175,190,211],"indicates":[27],"relationship":[29],"between":[30],"subject":[31],"and":[32,78,93,100,132,158,176,183,212],"object.":[33],"A":[34],"triple":[35,50],"can":[36],"also":[37],"contain":[38],"provenance":[39,79,101,177,199,213],"information,":[40,83,178,200],"consists":[42],"references":[44],"sources":[47],"(e.g.":[51],"scientific":[52],"publications":[53],"or":[54],"database":[55],"entries).":[56],"Knowledge":[57],"been":[60],"used":[61,189,198],"classify":[63],"drug-disease":[64],"pairs":[65],"for":[66,103,160,218],"drug":[67,104,129,219],"efficacy":[68,105,220],"screening,":[69],"but":[70,201],"existing":[71],"computational":[72],"methods":[73],"often":[75],"ignored":[76],"information.":[80],"Using":[81,139],"this":[82],"we":[84,115],"aimed":[85],"develop":[87],"a":[88,167],"supervised":[89],"machine":[90],"learning":[91],"classifier":[92],"determine":[94],"added":[96,216],"value":[97,217],"information":[102,191,214],"screening.":[106,221],"To":[107],"ensure":[108],"biological":[110],"plausibility":[111],"our":[113,117,146],"method":[114,147],"performed":[116,192,204],"research":[118],"on":[119],"protein":[121],"level,":[122],"where":[123],"drugs":[124],"are":[125],"represented":[126],"by":[127,134],"their":[128,135],"target":[130],"proteins,":[131],"diseases":[133],"disease":[136],"proteins.":[137],"RESULTS:":[138],"random":[140],"forests":[141],"with":[142],"repeated":[143],"10-fold":[144],"cross-validation,":[145],"achieved":[148],"an":[149],"area":[150],"under":[151],"ROC":[153],"curve":[154],"(AUC)":[155],"78.1%":[157],"74.3%":[159],"two":[161],"reference":[162],"sets.":[163],"We":[164,207],"benchmarked":[165],"against":[166],"state-of-the-art":[168],"knowledge-graph":[169],"technique":[170],"that":[171,187,196,209],"does":[172],"not":[173],"use":[174],"obtaining":[179],"AUCs":[180],"65.6%":[182],"64.6%,":[184],"respectively.":[185],"Classifiers":[186],"only":[188,197],"superior":[193],"classifiers":[195],"using":[202],"both":[203,210],"best.":[205],"CONCLUSION:":[206],"conclude":[208],"provide":[215]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-25T09:21:30.201066","created_date":"2025-10-10T00:00:00"}
