{"id":"https://openalex.org/W2807077960","doi":"https://doi.org/10.1186/s13326-018-0180-2","title":"Querying archetype-based EHRs by search ontology-based XPath engineering","display_name":"Querying archetype-based EHRs by search ontology-based XPath engineering","publication_year":2018,"publication_date":"2018-05-11","ids":{"openalex":"https://openalex.org/W2807077960","doi":"https://doi.org/10.1186/s13326-018-0180-2","mag":"2807077960","pmid":"https://pubmed.ncbi.nlm.nih.gov/29751829"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-018-0180-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-018-0180-2","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-018-0180-2","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-018-0180-2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034903408","display_name":"Stefan Kropf","orcid":"https://orcid.org/0000-0003-1305-8108"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Stefan Kropf","raw_affiliation_strings":["Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Leipzig University, H\u00e4rtelstra\u00dfe 16-18, Leipzig, 04107, Germany. stefan.kropf@imise.uni-leipzig.de","Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Leipzig University, H\u00e4rtelstra\u00dfe 16-18, Leipzig, 04107, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Leipzig University, H\u00e4rtelstra\u00dfe 16-18, Leipzig, 04107, Germany. stefan.kropf@imise.uni-leipzig.de","institution_ids":["https://openalex.org/I926574661"]},{"raw_affiliation_string":"Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Leipzig University, H\u00e4rtelstra\u00dfe 16-18, Leipzig, 04107, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058571630","display_name":"Alexandr Uciteli","orcid":"https://orcid.org/0000-0001-9558-5352"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alexandr Uciteli","raw_affiliation_strings":["Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Leipzig University, H\u00e4rtelstra\u00dfe 16-18, Leipzig, 04107, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Leipzig University, H\u00e4rtelstra\u00dfe 16-18, Leipzig, 04107, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067520272","display_name":"Katrin Schierle","orcid":"https://orcid.org/0000-0002-5188-5537"},"institutions":[{"id":"https://openalex.org/I4210125843","display_name":"University Hospital Leipzig","ror":"https://ror.org/028hv5492","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210125843"]},{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Katrin Schierle","raw_affiliation_strings":["Institute of Pathology, Leipzig University Hospital, Liebigstra\u00dfe 26, Leipzig, 04103, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Pathology, Leipzig University Hospital, Liebigstra\u00dfe 26, Leipzig, 04103, Germany","institution_ids":["https://openalex.org/I4210125843","https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067640061","display_name":"Peter Kr\u00fccken","orcid":null},"institutions":[{"id":"https://openalex.org/I4210125843","display_name":"University Hospital Leipzig","ror":"https://ror.org/028hv5492","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210125843"]},{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Peter Kr\u00fccken","raw_affiliation_strings":["Institute of Pathology, Leipzig University Hospital, Liebigstra\u00dfe 26, Leipzig, 04103, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Pathology, Leipzig University Hospital, Liebigstra\u00dfe 26, Leipzig, 04103, Germany","institution_ids":["https://openalex.org/I4210125843","https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024787898","display_name":"Kerstin Denecke","orcid":"https://orcid.org/0000-0001-6691-396X"},"institutions":[{"id":"https://openalex.org/I130692619","display_name":"Bern University of Applied Sciences","ror":"https://ror.org/02bnkt322","country_code":"CH","type":"education","lineage":["https://openalex.org/I130692619"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Kerstin Denecke","raw_affiliation_strings":["Institute for Medical Informatics, Bern University of Applied Science, Quellgasse 21, Biel, 2501, Switzerland"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics, Bern University of Applied Science, Quellgasse 21, Biel, 2501, Switzerland","institution_ids":["https://openalex.org/I130692619"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020087024","display_name":"Heinrich Herre","orcid":"https://orcid.org/0000-0001-5343-9218"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Heinrich Herre","raw_affiliation_strings":["Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Leipzig University, H\u00e4rtelstra\u00dfe 16-18, Leipzig, 04107, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics, Statistics and Epidemiology (IMISE), Leipzig University, H\u00e4rtelstra\u00dfe 16-18, Leipzig, 04107, Germany","institution_ids":["https://openalex.org/I926574661"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5034903408"],"corresponding_institution_ids":["https://openalex.org/I926574661"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1661,"currency":"EUR","value_usd":1791},"fwci":0.1861,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.53108084,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"9","issue":"1","first_page":"16","last_page":"16"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.9671000242233276,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/xpath","display_name":"XPath","score":0.91118323802948},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8631584048271179},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.7231076955795288},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6434452533721924},{"id":"https://openalex.org/keywords/xml-database","display_name":"XML database","score":0.4905683398246765},{"id":"https://openalex.org/keywords/xml-validation","display_name":"XML validation","score":0.4686885178089142},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.44207826256752014},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2831183671951294}],"concepts":[{"id":"https://openalex.org/C2780213375","wikidata":"https://www.wikidata.org/wiki/Q16340","display_name":"XPath","level":4,"score":0.91118323802948},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8631584048271179},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.7231076955795288},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6434452533721924},{"id":"https://openalex.org/C183068750","wikidata":"https://www.wikidata.org/wiki/Q357393","display_name":"XML database","level":3,"score":0.4905683398246765},{"id":"https://openalex.org/C55348073","wikidata":"https://www.wikidata.org/wiki/Q595926","display_name":"XML validation","level":3,"score":0.4686885178089142},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.44207826256752014},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2831183671951294},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s13326-018-0180-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-018-0180-2","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-018-0180-2","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:29751829","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29751829","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:arbor.bfh.ch:6172","is_oa":true,"landing_page_url":"https://arbor.bfh.ch/6172/","pdf_url":null,"source":{"id":"https://openalex.org/S4406922806","display_name":"ARBOR - Bern University of Applied Sciences Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Kropf, Stefan; Uciteli, Alexandr; Schierle, Katrin; Kr\u00fccken, Peter; Denecke, Kerstin; Herre, Heinrich (2018). Querying archetype-based EHRs by search ontology-based XPath engineering Journal of Biomedical Semantics, 9(1), pp. 1-14. BioMed Central 10.1186/s13326-018-0180-2 &lt;http://dx.doi.org/10.1186/s13326-018-0180-2&gt;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:0c5f9dc6640d4c2d8ffed15d53fe8669","is_oa":true,"landing_page_url":"https://doaj.org/article/0c5f9dc6640d4c2d8ffed15d53fe8669","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 9, Iss 1, Pp 1-14 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:4873681","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5946576","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13326-018-0180-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-018-0180-2","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-018-0180-2","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.699999988079071,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2807077960.pdf","grobid_xml":"https://content.openalex.org/works/W2807077960.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W102398446","https://openalex.org/W612375141","https://openalex.org/W651622042","https://openalex.org/W1536690700","https://openalex.org/W1549103420","https://openalex.org/W1575787498","https://openalex.org/W1888535752","https://openalex.org/W2004910511","https://openalex.org/W2006427622","https://openalex.org/W2016412752","https://openalex.org/W2037043950","https://openalex.org/W2050007771","https://openalex.org/W2065669787","https://openalex.org/W2096560534","https://openalex.org/W2104608657","https://openalex.org/W2110918591","https://openalex.org/W2112015698","https://openalex.org/W2135479399","https://openalex.org/W2139458940","https://openalex.org/W2165289950","https://openalex.org/W2261812172","https://openalex.org/W2295479997","https://openalex.org/W2397338825","https://openalex.org/W2400567143","https://openalex.org/W2478104468","https://openalex.org/W2512540076","https://openalex.org/W2532938041","https://openalex.org/W2575322611","https://openalex.org/W2592310674","https://openalex.org/W2593172760","https://openalex.org/W2770005393","https://openalex.org/W2914113978","https://openalex.org/W4205455232","https://openalex.org/W6609930034"],"related_works":["https://openalex.org/W2097396510","https://openalex.org/W1554870463","https://openalex.org/W2111274946","https://openalex.org/W169802313","https://openalex.org/W1555764847","https://openalex.org/W2601954520","https://openalex.org/W2129622458","https://openalex.org/W1494225641","https://openalex.org/W2087121382","https://openalex.org/W1525887267"],"abstract_inverted_index":{"The":[0],"introduced":[1],"Search":[2,7,22],"Ontology":[3],"XML":[4,13],"extension":[5],"connects":[6],"Terms":[8],"to":[9],"certain":[10],"parts":[11],"in":[12],"documents":[14],"and":[15],"enables":[16],"an":[17],"ontology-based":[18,23],"definition":[19],"of":[20,34],"queries.":[21],"XPath":[24,36],"engineering":[25],"can":[26],"support":[27],"research":[28],"question":[29],"answering":[30],"by":[31],"the":[32],"specification":[33],"complex":[35],"expressions":[37],"without":[38],"deep":[39],"syntax":[40],"knowledge":[41],"about":[42],"XPaths.":[43]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
