{"id":"https://openalex.org/W2783038509","doi":"https://doi.org/10.1186/s13326-017-0170-9","title":"Tackling the challenges of matching biomedical ontologies","display_name":"Tackling the challenges of matching biomedical ontologies","publication_year":2018,"publication_date":"2018-01-15","ids":{"openalex":"https://openalex.org/W2783038509","doi":"https://doi.org/10.1186/s13326-017-0170-9","mag":"2783038509","pmid":"https://pubmed.ncbi.nlm.nih.gov/29335022"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-017-0170-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0170-9","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0170-9","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0170-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072979086","display_name":"Daniel Faria","orcid":"https://orcid.org/0000-0003-1511-277X"},"institutions":[{"id":"https://openalex.org/I48057805","display_name":"Instituto Gulbenkian de Ci\u00eancia","ror":"https://ror.org/04b08hq31","country_code":"PT","type":"education","lineage":["https://openalex.org/I48057805"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Daniel Faria","raw_affiliation_strings":["Instituto Gulbenkian de Ci\u00eancia, R Quinta Grande 6, Oeiras, Portugal. dfaria@igc.gulbenkian.pt","Instituto Gulbenkian de Ci\u00eancia, R Quinta Grande 6, Oeiras, Portugal"],"raw_orcid":"https://orcid.org/0000-0003-1511-277X","affiliations":[{"raw_affiliation_string":"Instituto Gulbenkian de Ci\u00eancia, R Quinta Grande 6, Oeiras, Portugal. dfaria@igc.gulbenkian.pt","institution_ids":["https://openalex.org/I48057805"]},{"raw_affiliation_string":"Instituto Gulbenkian de Ci\u00eancia, R Quinta Grande 6, Oeiras, Portugal","institution_ids":["https://openalex.org/I48057805"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034898355","display_name":"C\u00e1tia Pesquita","orcid":"https://orcid.org/0000-0002-1847-9393"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Catia Pesquita","raw_affiliation_strings":["LASIGE, Faculdade de Ci\u00eancias, Universidade de Lisboa, Campo Grande, Lisboa, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LASIGE, Faculdade de Ci\u00eancias, Universidade de Lisboa, Campo Grande, Lisboa, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008108940","display_name":"Isabela Mott","orcid":"https://orcid.org/0000-0002-4697-296X"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Isabela Mott","raw_affiliation_strings":["LASIGE, Faculdade de Ci\u00eancias, Universidade de Lisboa, Campo Grande, Lisboa, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LASIGE, Faculdade de Ci\u00eancias, Universidade de Lisboa, Campo Grande, Lisboa, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102014861","display_name":"Catarina Martins","orcid":"https://orcid.org/0000-0001-6656-0754"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Catarina Martins","raw_affiliation_strings":["School of Computer Science, University of Manchester, Oxford Rd, Manchester, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Manchester, Oxford Rd, Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014333753","display_name":"Francisco M. Couto","orcid":"https://orcid.org/0000-0003-0627-1496"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Francisco M. Couto","raw_affiliation_strings":["LASIGE, Faculdade de Ci\u00eancias, Universidade de Lisboa, Campo Grande, Lisboa, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LASIGE, Faculdade de Ci\u00eancias, Universidade de Lisboa, Campo Grande, Lisboa, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5104780631","display_name":"Isabel F. Cruz","orcid":null},"institutions":[{"id":"https://openalex.org/I39422238","display_name":"University of Illinois Chicago","ror":"https://ror.org/02mpq6x41","country_code":"US","type":"education","lineage":["https://openalex.org/I39422238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Isabel F. Cruz","raw_affiliation_strings":["ADVIS Lab, Department of Computer Science, University of Illinois at Chicago, 851 S. Morgan St., Chicago, Illinois, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ADVIS Lab, Department of Computer Science, University of Illinois at Chicago, 851 S. Morgan St., Chicago, Illinois, USA","institution_ids":["https://openalex.org/I39422238"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5072979086"],"corresponding_institution_ids":["https://openalex.org/I48057805"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":2.5055,"has_fulltext":true,"cited_by_count":46,"citation_normalized_percentile":{"value":0.90025056,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"9","issue":"1","first_page":"4","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8285999894142151,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8285999894142151,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.14390000700950623,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.003800000064074993,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8444440960884094},{"id":"https://openalex.org/keywords/ontology-alignment","display_name":"Ontology alignment","score":0.784850001335144},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.646687924861908},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.6278682947158813},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5871284008026123},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.519656777381897},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5136885046958923},{"id":"https://openalex.org/keywords/hash-function","display_name":"Hash function","score":0.439424067735672},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33226829767227173},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.32356104254722595},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.27234405279159546},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.18740281462669373}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8444440960884094},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.784850001335144},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.646687924861908},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.6278682947158813},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5871284008026123},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.519656777381897},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5136885046958923},{"id":"https://openalex.org/C99138194","wikidata":"https://www.wikidata.org/wiki/Q183427","display_name":"Hash function","level":2,"score":0.439424067735672},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33226829767227173},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.32356104254722595},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.27234405279159546},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.18740281462669373},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1186/s13326-017-0170-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0170-9","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0170-9","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:29335022","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29335022","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:doaj.org/article:3289a3274a8a4ae9915b8623c7f154ad","is_oa":false,"landing_page_url":"https://doaj.org/article/3289a3274a8a4ae9915b8623c7f154ad","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 9, Iss 1, Pp 1-19 (2018)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5769431","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5769431","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/25ad6b56-60b6-4123-a639-ce4b1610f806","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/25ad6b56-60b6-4123-a639-ce4b1610f806","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faria, D, Pesquita, C, Mott, I, Martins, C, Couto, F M & Cruz, I F 2018, 'Tackling the challenges of matching biomedical ontologies', Journal of Biomedical Semantics, vol. 9, no. 1, 4. https://doi.org/10.1186/s13326-017-0170-9","raw_type":"article"},{"id":"pmh:oai:pure.atira.dk:publications/25ad6b56-60b6-4123-a639-ce4b1610f806","is_oa":true,"landing_page_url":"https://www.research.manchester.ac.uk/portal/en/publications/tackling-the-challenges-of-matching-biomedical-ontologies(25ad6b56-60b6-4123-a639-ce4b1610f806).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faria, D, Pesquita, C, Mott, I, Martins, C, Couto, F M & Cruz, I F 2018, 'Tackling the challenges of matching biomedical ontologies', Journal of Biomedical Semantics, vol. 9, no. 1, 4. https://doi.org/10.1186/s13326-017-0170-9","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13326-017-0170-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0170-9","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0170-9","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.4099999964237213}],"awards":[{"id":"https://openalex.org/G265104915","display_name":null,"funder_award_id":"EC H2020","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G2694504358","display_name":"III: Large: Collaborative Research: Moving Objects Databases for Exploration of Virtual and Real Environments","funder_award_id":"1213013","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3496790059","display_name":null,"funder_award_id":"CCF-1561144","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3783317134","display_name":null,"funder_award_id":"H2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G4199222969","display_name":null,"funder_award_id":"III-1618126","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G461451717","display_name":null,"funder_award_id":"1646395","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5040315192","display_name":null,"funder_award_id":"676559","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G5198366819","display_name":null,"funder_award_id":"PTDC/EEI-ESS/4633/2014","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G5389528686","display_name":"CyberSEES: Type 2: Data Integration for Urban Metabolism","funder_award_id":"1331800","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5625370251","display_name":null,"funder_award_id":"III-1213038","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6128949145","display_name":null,"funder_award_id":"UID/CEC/00408/2013","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G6174671219","display_name":"III: Small: Enhancing Ontology Matching with Visual Analytics","funder_award_id":"1618126","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6697156556","display_name":null,"funder_award_id":"UID/CEC/00408/2013","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G803571008","display_name":null,"funder_award_id":"676559 ELIXIR-EXCELERATE","funder_id":"https://openalex.org/F4320338338","funder_display_name":"H2020 Research Infrastructures"},{"id":"https://openalex.org/G8434514299","display_name":null,"funder_award_id":"CNS-1646395","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8953076280","display_name":null,"funder_award_id":"CNS-1646395, III-1618126, CCF-1331800, and III-1213013","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306137","display_name":"Bill and Melinda Gates Foundation","ror":"https://ror.org/0456r8d26"},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"},{"id":"https://openalex.org/F4320338338","display_name":"H2020 Research Infrastructures","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2783038509.pdf","grobid_xml":"https://content.openalex.org/works/W2783038509.grobid-xml"},"referenced_works_count":63,"referenced_works":["https://openalex.org/W18024286","https://openalex.org/W49074955","https://openalex.org/W102861580","https://openalex.org/W177300694","https://openalex.org/W1219736013","https://openalex.org/W1501533447","https://openalex.org/W1511291750","https://openalex.org/W1555059521","https://openalex.org/W1601038846","https://openalex.org/W1741736375","https://openalex.org/W1792193397","https://openalex.org/W1969834784","https://openalex.org/W1982801501","https://openalex.org/W1986613416","https://openalex.org/W1993451156","https://openalex.org/W2006719549","https://openalex.org/W2022451103","https://openalex.org/W2030103067","https://openalex.org/W2039386673","https://openalex.org/W2047029075","https://openalex.org/W2063047597","https://openalex.org/W2067819940","https://openalex.org/W2070327800","https://openalex.org/W2081580037","https://openalex.org/W2100684772","https://openalex.org/W2106502213","https://openalex.org/W2113142309","https://openalex.org/W2116034137","https://openalex.org/W2117078075","https://openalex.org/W2126890920","https://openalex.org/W2131660156","https://openalex.org/W2136410628","https://openalex.org/W2145546232","https://openalex.org/W2159092541","https://openalex.org/W2159583324","https://openalex.org/W2163670493","https://openalex.org/W2163685645","https://openalex.org/W2175779775","https://openalex.org/W2254757044","https://openalex.org/W2278027245","https://openalex.org/W2289495543","https://openalex.org/W2293522929","https://openalex.org/W2401697546","https://openalex.org/W2402096402","https://openalex.org/W2402445958","https://openalex.org/W2404369708","https://openalex.org/W2404618885","https://openalex.org/W2404869514","https://openalex.org/W2406556598","https://openalex.org/W2406695577","https://openalex.org/W2502715931","https://openalex.org/W2522389511","https://openalex.org/W2522744581","https://openalex.org/W2583127320","https://openalex.org/W2585944730","https://openalex.org/W2613678961","https://openalex.org/W4205171160","https://openalex.org/W4241410814","https://openalex.org/W6604167652","https://openalex.org/W6676957677","https://openalex.org/W6685438526","https://openalex.org/W6689843232","https://openalex.org/W6747570393"],"related_works":["https://openalex.org/W810539636","https://openalex.org/W2127299687","https://openalex.org/W2386232412","https://openalex.org/W149627178","https://openalex.org/W22148886","https://openalex.org/W4206428734","https://openalex.org/W152870918","https://openalex.org/W1794266373","https://openalex.org/W2365397974","https://openalex.org/W2357882026"],"abstract_inverted_index":{"BACKGROUND:":[0],"Biomedical":[1],"ontologies":[2,24,71,119,135,183],"pose":[3],"several":[4],"challenges":[5,67,78,271],"to":[6,11,19,44,64,137,163,192,198,210,267,282],"ontology":[7,110,276],"matching":[8,41,62,69,81,111,116,208,258,277,290],"due":[9],"both":[10],"the":[12,15,20,23,30,38,58,66,74,77,84,89,98,102,146,153,211,221,225,228,233,237,269],"complexity":[13,100],"of":[14,22,40,68,76,101,155,158,176,224,236],"biomedical":[16,27,70,118,134,182,234,274],"domain":[17],"and":[18,48,72,131,149,178],"characteristics":[21],"themselves.":[25],"The":[26],"tracks":[28,235],"in":[29,133,141,232],"Ontology":[31],"Matching":[32],"Evaluation":[33],"Initiative":[34],"(OAEI)":[35],"have":[36],"spurred":[37],"development":[39,223],"systems":[42,63,112,259,278],"able":[43,281],"tackle":[45,65,268],"these":[46],"challenges,":[47],"benchmarked":[49],"their":[50],"general":[51],"performance.":[52],"In":[53],"this":[54,92],"study,":[55],"we":[56,168],"dissect":[57],"strategies":[59,286],"employed":[60],"by":[61,107,273],"gauge":[73],"impact":[75],"themselves":[79],"on":[80],"performance,":[82],"using":[83,144,181],"AgreementMakerLight":[85],"(AML)":[86],"system":[87],"as":[88,184,195,243],"platform":[90],"for":[91,115,125,152,220],"study.":[93],"RESULTS:":[94],"We":[95,121,203],"demonstrate":[96],"that":[97,123,150,170,205,253],"linear":[99],"hash-based":[103,212],"searching":[104,213],"strategy":[105],"implemented":[106],"most":[108],"state-of-the-art":[109],"is":[113,188,249,264],"essential":[114],"large":[117],"efficiently.":[120],"show":[122,169],"accounting":[124,151],"all":[126],"lexical":[127,200],"annotations":[128,159],"(e.g.,":[129],"labels":[130],"synonyms)":[132],"leads":[136,162],"a":[138,164,173,217,288],"substantial":[139],"improvement":[140],"F-measure":[142],"over":[143],"only":[145,250],"primary":[147],"name,":[148],"reliability":[154],"different":[156],"types":[157],"generally":[160,189],"also":[161,240],"marked":[165],"improvement.":[166],"Finally,":[167],"cross-references":[171],"are":[172],"reliable":[174,191],"source":[175],"information":[177],"that,":[179,266],"when":[180],"background":[185],"knowledge,":[186],"it":[187,263],"more":[190],"use":[193],"them":[194],"mediators":[196],"than":[197],"perform":[199],"expansion.":[201],"CONCLUSIONS:":[202],"anticipate":[204],"translating":[206],"traditional":[207],"algorithms":[209],"paradigm":[214],"will":[215,239],"be":[216,241,255,280],"critical":[218],"direction":[219],"future":[222],"field.":[226],"Improving":[227],"evaluation":[229],"carried":[230],"out":[231],"OAEI":[238],"important,":[242],"without":[244],"proper":[245],"reference":[246],"alignments":[247],"there":[248],"so":[251],"much":[252],"can":[254],"ascertained":[256],"about":[257],"or":[260],"strategies.":[261],"Nevertheless,":[262],"clear":[265],"various":[270],"posed":[272],"ontologies,":[275],"must":[279],"efficiently":[283],"combine":[284],"multiple":[285],"into":[287],"mature":[289],"approach.":[291]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":13},{"year":2018,"cited_by_count":3}],"updated_date":"2026-05-07T13:39:58.223016","created_date":"2025-10-10T00:00:00"}