{"id":"https://openalex.org/W2754446879","doi":"https://doi.org/10.1186/s13326-017-0135-z","title":"Design of an extensive information representation scheme for clinical narratives","display_name":"Design of an extensive information representation scheme for clinical narratives","publication_year":2017,"publication_date":"2017-09-11","ids":{"openalex":"https://openalex.org/W2754446879","doi":"https://doi.org/10.1186/s13326-017-0135-z","mag":"2754446879","pmid":"https://pubmed.ncbi.nlm.nih.gov/28893314"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-017-0135-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0135-z","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0135-z","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0135-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059209944","display_name":"Louise Del\u00e9ger","orcid":"https://orcid.org/0000-0003-1399-4828"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Louise Del\u00e9ger","raw_affiliation_strings":["French National Institute for Agricultural Research (INRA), Domaine de Vilvert, Jouy en Josas, Paris, 78352, France","LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"French National Institute for Agricultural Research (INRA), Domaine de Vilvert, Jouy en Josas, Paris, 78352, France","institution_ids":["https://openalex.org/I4210088668"]},{"raw_affiliation_string":"LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085491820","display_name":"Leonardo Campillos Llanos","orcid":"https://orcid.org/0000-0003-3040-1756"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Leonardo Campillos","raw_affiliation_strings":["LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025118242","display_name":"Anne\u2010Laure Ligozat","orcid":"https://orcid.org/0000-0002-2188-3426"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210097372","display_name":"\u00c9cole Nationale Sup\u00e9rieure d\u2019Informatique pour l\u2019Industrie et l\u2019Entreprise","ror":"https://ror.org/00tx98v53","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210097372"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Anne-Laure Ligozat","raw_affiliation_strings":["ENSIIE, 1 square de la r\u00e9sistance, \u00c9vry Cedex, 91025, France","LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ENSIIE, 1 square de la r\u00e9sistance, \u00c9vry Cedex, 91025, France","institution_ids":["https://openalex.org/I4210097372"]},{"raw_affiliation_string":"LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005499870","display_name":"Aur\u00e9lie N\u00e9v\u00e9ol","orcid":"https://orcid.org/0000-0002-1846-9144"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Aur\u00e9lie N\u00e9v\u00e9ol","raw_affiliation_strings":["LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France. neveol@limsi.fr","LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France"],"raw_orcid":"https://orcid.org/0000-0002-1846-9144","affiliations":[{"raw_affiliation_string":"LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France. neveol@limsi.fr","institution_ids":["https://openalex.org/I4210115485","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"LIMSI, CNRS, Universit\u00e9 Paris - Saclay, Rue John von Neumann, Orsay, 91405, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5005499870"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I277688954","https://openalex.org/I4210115485"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1745,"currency":"EUR","value_usd":1881},"fwci":0.4487,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.63945466,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"8","issue":"1","first_page":"37","last_page":"37"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7678999900817871,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7678999900817871,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.12559999525547028,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.03500000014901161,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7992768287658691},{"id":"https://openalex.org/keywords/scheme","display_name":"Scheme (mathematics)","score":0.7513033151626587},{"id":"https://openalex.org/keywords/narrative","display_name":"Narrative","score":0.7399661540985107},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6731312274932861},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6027637124061584},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5764343738555908},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5160762667655945},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.5126103758811951},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.4921247363090515},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4895668923854828},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4533977508544922},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41369086503982544},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.13933885097503662}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7992768287658691},{"id":"https://openalex.org/C77618280","wikidata":"https://www.wikidata.org/wiki/Q1155772","display_name":"Scheme (mathematics)","level":2,"score":0.7513033151626587},{"id":"https://openalex.org/C199033989","wikidata":"https://www.wikidata.org/wiki/Q1318295","display_name":"Narrative","level":2,"score":0.7399661540985107},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6731312274932861},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6027637124061584},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5764343738555908},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5160762667655945},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.5126103758811951},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.4921247363090515},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4895668923854828},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4533977508544922},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41369086503982544},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.13933885097503662},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1186/s13326-017-0135-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0135-z","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0135-z","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:28893314","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28893314","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:HAL:hal-01631767v1","is_oa":true,"landing_page_url":"https://hal.science/hal-01631767","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, 2017, 8, pp.37. ⟨10.1186/s13326-017-0135-z⟩","raw_type":"Journal articles"},{"id":"pmh:oai:doaj.org/article:091338ef60244ee3b50a2d5d7754aea5","is_oa":true,"landing_page_url":"https://doaj.org/article/091338ef60244ee3b50a2d5d7754aea5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 8, Iss 1, Pp 1-18 (2017)","raw_type":"article"},{"id":"pmh:oai:prodinra.inra.fr:413106","is_oa":true,"landing_page_url":"http://prodinra.inra.fr/record/413106","pdf_url":null,"source":{"id":"https://openalex.org/S4306400794","display_name":"Prodinra (INRA Bordeaux-Aquitaine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210088668","host_organization_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","host_organization_lineage":["https://openalex.org/I4210088668"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics  (8), 1-18. (2017)","raw_type":"ARTICLE"},{"id":"pmh:oai:pubmedcentral.nih.gov:5594525","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5594525","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13326-017-0135-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0135-z","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0135-z","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.8700000047683716}],"awards":[{"id":"https://openalex.org/G4603380532","display_name":"Automatic Understanding of Biomedical Texts for Translational Research","funder_award_id":"ANR-13-JS02-0009","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320338463","display_name":"CHIST-ERA","ror":"https://ror.org/00rbzpz17"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2754446879.pdf","grobid_xml":"https://content.openalex.org/works/W2754446879.grobid-xml"},"referenced_works_count":55,"referenced_works":["https://openalex.org/W30314283","https://openalex.org/W580573057","https://openalex.org/W1502957213","https://openalex.org/W1524281572","https://openalex.org/W1582734619","https://openalex.org/W1687090725","https://openalex.org/W1745514781","https://openalex.org/W1890275775","https://openalex.org/W1922167300","https://openalex.org/W1967866551","https://openalex.org/W1976610063","https://openalex.org/W1982059951","https://openalex.org/W2012688074","https://openalex.org/W2016266742","https://openalex.org/W2045718189","https://openalex.org/W2071890384","https://openalex.org/W2074734816","https://openalex.org/W2103272886","https://openalex.org/W2106782755","https://openalex.org/W2108371713","https://openalex.org/W2114039834","https://openalex.org/W2114388055","https://openalex.org/W2115259143","https://openalex.org/W2115871101","https://openalex.org/W2116446440","https://openalex.org/W2117770626","https://openalex.org/W2119207919","https://openalex.org/W2121382432","https://openalex.org/W2122210092","https://openalex.org/W2125726375","https://openalex.org/W2128535227","https://openalex.org/W2134498732","https://openalex.org/W2137407193","https://openalex.org/W2145270227","https://openalex.org/W2146089916","https://openalex.org/W2155659776","https://openalex.org/W2159583324","https://openalex.org/W2159985898","https://openalex.org/W2162161257","https://openalex.org/W2162228163","https://openalex.org/W2168041406","https://openalex.org/W2168528736","https://openalex.org/W2168842392","https://openalex.org/W2197629079","https://openalex.org/W2236169403","https://openalex.org/W2251443519","https://openalex.org/W2252197222","https://openalex.org/W2263893547","https://openalex.org/W2273556505","https://openalex.org/W2293452551","https://openalex.org/W2568020214","https://openalex.org/W2588331448","https://openalex.org/W2621248392","https://openalex.org/W2955765364","https://openalex.org/W2963374133"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W1570025324","https://openalex.org/W2116902754","https://openalex.org/W376728115","https://openalex.org/W2166185180"],"abstract_inverted_index":{"BACKGROUND:":[0],"Knowledge":[1],"representation":[2,61,91,128],"frameworks":[3],"are":[4,158],"essential":[5],"to":[6,14,33,35,56,71,79,96,114,149,154],"the":[7,15,31,45,97,110,152,169,174],"understanding":[8],"of":[9,17,48,75,99,112,119,168,187],"complex":[10],"biomedical":[11,18],"processes,":[12],"and":[13,70,93,139,157],"analysis":[16,98],"texts":[19],"that":[20,88,108,133],"describe":[21],"them.":[22],"Combined":[23],"with":[24],"natural":[25,176],"language":[26,177],"processing":[27,178],"(NLP),":[28],"they":[29],"have":[30],"potential":[32],"contribute":[34],"retrospective":[36],"studies":[37],"by":[38],"unlocking":[39],"important":[40],"phenotyping":[41],"information":[42,60,65,90,113,127,163],"contained":[43,66],"in":[44,67,173],"narrative":[46,77],"content":[47],"electronic":[49],"health":[50],"records":[51],"(EHRs).":[52],"This":[53],"work":[54,87],"aims":[55],"develop":[57],"an":[58],"extensive":[59],"scheme":[62,107,129,153,164],"for":[63,130],"clinical":[64,81,100,120,131,155,175],"EHR":[68,76],"narratives,":[69],"support":[72],"secondary":[73],"use":[74],"data":[78],"answer":[80],"questions.":[82,121],"METHODS:":[83],"We":[84,102,123],"review":[85],"recent":[86],"proposed":[89],"schemes":[92,171],"applied":[94],"them":[95],"narratives.":[101],"then":[103],"propose":[104],"a":[105,116,125,183],"unifying":[106],"supports":[109],"extraction":[111],"address":[115],"large":[117],"variety":[118],"RESULTS:":[122],"devised":[124],"new":[126],"narratives":[132,156],"comprises":[134],"13":[135],"entities,":[136],"11":[137],"attributes":[138],"37":[140],"relations.":[141,188],"The":[142,162],"associated":[143],"annotation":[144],"guidelines":[145],"can":[146],"be":[147],"used":[148],"consistently":[150],"apply":[151],"https://cabernet.limsi.fr/annotation_guide_for_the_merlot_french_clinical_corpus-Sept2016.pdf":[159],".":[160],"CONCLUSION:":[161],"includes":[165],"many":[166],"elements":[167],"major":[170],"described":[172],"literature,":[179],"as":[180,182],"well":[181],"uniquely":[184],"detailed":[185],"set":[186]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3}],"updated_date":"2026-06-19T17:40:00.097472","created_date":"2025-10-10T00:00:00"}