{"id":"https://openalex.org/W2404764459","doi":"https://doi.org/10.1186/s13326-017-0130-4","title":"Building a semantic web-based metadata repository for facilitating detailed clinical modeling in cancer genome studies","display_name":"Building a semantic web-based metadata repository for facilitating detailed clinical modeling in cancer genome studies","publication_year":2017,"publication_date":"2017-06-05","ids":{"openalex":"https://openalex.org/W2404764459","doi":"https://doi.org/10.1186/s13326-017-0130-4","mag":"2404764459","pmid":"https://pubmed.ncbi.nlm.nih.gov/28583204"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-017-0130-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0130-4","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0130-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0130-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101599373","display_name":"Deepak Sharma","orcid":"https://orcid.org/0000-0001-7008-587X"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Deepak K. Sharma","raw_affiliation_strings":["Department of Health Sciences Research, Mayo Clinic, 200 First St SW, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, 200 First St SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053205429","display_name":"Harold R. Solbrig","orcid":"https://orcid.org/0000-0002-5928-3071"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Harold R. Solbrig","raw_affiliation_strings":["Department of Health Sciences Research, Mayo Clinic, 200 First St SW, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, 200 First St SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076058129","display_name":"Cui Tao","orcid":"https://orcid.org/0000-0002-4267-1924"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cui Tao","raw_affiliation_strings":["University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009604048","display_name":"Chunhua Weng","orcid":"https://orcid.org/0000-0002-9624-0214"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chunhua Weng","raw_affiliation_strings":["Columbia University, New York, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Columbia University, New York, NY, USA","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060390916","display_name":"Christopher G. Chute","orcid":"https://orcid.org/0000-0001-5437-2545"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher G. Chute","raw_affiliation_strings":["Johns Hopkins University, Baltimore, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Johns Hopkins University, Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007963072","display_name":"Guoqian Jiang","orcid":"https://orcid.org/0000-0003-2940-0019"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Guoqian Jiang","raw_affiliation_strings":["Department of Health Sciences Research, Mayo Clinic, 200 First St SW, Rochester, MN, 55905, USA. jiang.guoqian@mayo.edu","Department of Health Sciences Research, Mayo Clinic, 200 First St SW, Rochester, MN, 55905, USA"],"raw_orcid":"https://orcid.org/0000-0003-2940-0019","affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, 200 First St SW, Rochester, MN, 55905, USA. jiang.guoqian@mayo.edu","institution_ids":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, 200 First St SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I1330342723"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5007963072"],"corresponding_institution_ids":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"],"apc_list":{"value":1340,"currency":"USD","value_usd":1340},"apc_paid":{"value":1340,"currency":"USD","value_usd":1340},"fwci":0.4054,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.58234072,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"8","issue":"1","first_page":"19","last_page":"19"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5728999972343445,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5728999972343445,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.1281999945640564,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.03779999911785126,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.8557059168815613},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8044549822807312},{"id":"https://openalex.org/keywords/metadata-modeling","display_name":"Metadata modeling","score":0.52159583568573},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5057053565979004},{"id":"https://openalex.org/keywords/data-dictionary","display_name":"Data dictionary","score":0.4316679537296295},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.4271467924118042},{"id":"https://openalex.org/keywords/information-repository","display_name":"Information repository","score":0.4261877238750458},{"id":"https://openalex.org/keywords/data-element","display_name":"Data element","score":0.42385923862457275},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2969016432762146},{"id":"https://openalex.org/keywords/computer-data-storage","display_name":"Computer data storage","score":0.10373291373252869},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.08693131804466248},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.08300924301147461}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.8557059168815613},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8044549822807312},{"id":"https://openalex.org/C110326360","wikidata":"https://www.wikidata.org/wiki/Q17149476","display_name":"Metadata modeling","level":4,"score":0.52159583568573},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5057053565979004},{"id":"https://openalex.org/C98143201","wikidata":"https://www.wikidata.org/wiki/Q1147639","display_name":"Data dictionary","level":3,"score":0.4316679537296295},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.4271467924118042},{"id":"https://openalex.org/C3102742","wikidata":"https://www.wikidata.org/wiki/Q6031177","display_name":"Information repository","level":3,"score":0.4261877238750458},{"id":"https://openalex.org/C30872290","wikidata":"https://www.wikidata.org/wiki/Q1172389","display_name":"Data element","level":3,"score":0.42385923862457275},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2969016432762146},{"id":"https://openalex.org/C194739806","wikidata":"https://www.wikidata.org/wiki/Q66221","display_name":"Computer data storage","level":2,"score":0.10373291373252869},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.08693131804466248},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.08300924301147461},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s13326-017-0130-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0130-4","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0130-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:28583204","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28583204","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:doaj.org/article:3ea6492ebcce42558674157477bbf8dd","is_oa":true,"landing_page_url":"https://doaj.org/article/3ea6492ebcce42558674157477bbf8dd","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 8, Iss 1, Pp 1-11 (2017)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:4312852","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5460361","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13326-017-0130-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0130-4","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0130-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.6000000238418579,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G1182879724","display_name":null,"funder_award_id":"U01 CA180940","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G1888919153","display_name":null,"funder_award_id":"UL1 TR000371","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"}],"funders":[{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2404764459.pdf","grobid_xml":"https://content.openalex.org/works/W2404764459.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W116270379","https://openalex.org/W165823196","https://openalex.org/W1553851612","https://openalex.org/W2105003863","https://openalex.org/W2120789186","https://openalex.org/W2164205487","https://openalex.org/W2292418148","https://openalex.org/W2399713721","https://openalex.org/W2410096259","https://openalex.org/W2540149843","https://openalex.org/W2555756618","https://openalex.org/W2592706393"],"related_works":["https://openalex.org/W3084772717","https://openalex.org/W3199469221","https://openalex.org/W2362378919","https://openalex.org/W202512329","https://openalex.org/W2278079987","https://openalex.org/W2907247951","https://openalex.org/W2136226335","https://openalex.org/W2374379029","https://openalex.org/W2332678692","https://openalex.org/W2418148095"],"abstract_inverted_index":{"BACKGROUND:":[0],"Detailed":[1],"Clinical":[2,97],"Models":[3],"(DCMs)":[4],"have":[5],"been":[6],"regarded":[7],"as":[8,68],"the":[9,52,106,122,125,128,139,149,189,194,204,238],"basis":[10],"for":[11,41],"retaining":[12],"computable":[13],"meaning":[14],"when":[15],"data":[16,28,108,118,196,201],"are":[17,207],"exchanged":[18],"between":[19],"heterogeneous":[20],"computer":[21],"systems.":[22],"To":[23],"better":[24],"support":[25,211,243],"clinical":[26,43,74,170,215,240,249],"cancer":[27,46,60,78,171,250],"capturing":[29],"and":[30,57,96,120,198],"reporting,":[31],"there":[32],"is":[33,54,154],"an":[34,226],"emerging":[35],"need":[36],"to":[37,55,156,229,242],"develop":[38,56],"informatics":[39,219],"solutions":[40],"standards-based":[42],"models":[44],"in":[45,72,77,112,138,148,193,203,210,248],"study":[47,53,62,80,173,187,251],"domains.":[48,81,252],"The":[49,113,144],"objective":[50],"of":[51,124,179,188,212],"evaluate":[58],"a":[59,69,85,165,176,185,231],"genome":[61,79,172],"metadata":[63,88,94,123,166,205,233],"management":[64],"system":[65],"that":[66,235],"serves":[67],"key":[70],"infrastructure":[71],"supporting":[73],"information":[75],"modeling":[76,241],"METHODS:":[82],"We":[83,104,163,183],"leveraged":[84],"Semantic":[86,222],"Web-based":[87],"repository":[89,167,206,234],"enhanced":[90],"with":[91,168],"both":[92],"ISO11179":[93],"standard":[95],"Information":[98],"Modeling":[99],"Initiative":[100],"(CIMI)":[101],"Reference":[102,152],"Model.":[103],"used":[105,155],"common":[107],"elements":[109,160,202],"(CDEs)":[110],"defined":[111,147],"Cancer":[114,130],"Genome":[115],"Atlas":[116],"(TCGA)":[117],"dictionary,":[119],"extracted":[121],"CDEs":[126],"using":[127],"NCI":[129],"Data":[131],"Standards":[132],"Repository":[133],"(caDSR)":[134],"CDE":[135],"dataset":[136],"rendered":[137],"Resource":[140],"Description":[141],"Framework":[142],"(RDF).":[143],"ITEM/ITEM_GROUP":[145],"pattern":[146,181],"latest":[150],"CIMI":[151],"Model":[153],"represent":[157],"reusable":[158],"model":[159],"(mini-Archetypes).":[161],"RESULTS:":[162],"produced":[164],"38":[169],"domains,":[174],"comprising":[175],"rich":[177],"collection":[178],"mini-Archetype":[180],"instances.":[182],"performed":[184],"case":[186],"domain":[190],"\"clinical":[191],"pharmaceutical\"":[192],"TCGA":[195,247],"dictionary":[197],"demonstrated":[199],"enriched":[200],"very":[208],"useful":[209],"building":[213],"detailed":[214,239],"models.":[216],"CONCLUSION:":[217],"Our":[218],"approach":[220],"leveraging":[221],"Web":[223],"technologies":[224],"provides":[225],"effective":[227],"way":[228],"build":[230],"CIMI-compliant":[232],"would":[236],"facilitate":[237],"use":[244],"cases":[245],"beyond":[246]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}