{"id":"https://openalex.org/W2600074498","doi":"https://doi.org/10.1186/s13326-017-0118-0","title":"BioFed: federated query processing over life sciences linked open data","display_name":"BioFed: federated query processing over life sciences linked open data","publication_year":2017,"publication_date":"2017-03-15","ids":{"openalex":"https://openalex.org/W2600074498","doi":"https://doi.org/10.1186/s13326-017-0118-0","mag":"2600074498","pmid":"https://pubmed.ncbi.nlm.nih.gov/28298238"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-017-0118-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0118-0","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0118-0","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0118-0","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036637294","display_name":"Ali Hasnain","orcid":"https://orcid.org/0000-0003-4014-4394"},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":true,"raw_author_name":"Ali Hasnain","raw_affiliation_strings":["Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland. ali.hasnain@insight-centre.org","Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland. ali.hasnain@insight-centre.org","institution_ids":[]},{"raw_affiliation_string":"Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044073014","display_name":"Qaiser Mehmood","orcid":"https://orcid.org/0000-0002-1380-1750"},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Qaiser Mehmood","raw_affiliation_strings":["Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028724165","display_name":"Syeda Sana e Zainab","orcid":"https://orcid.org/0000-0002-6097-198X"},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Syeda Sana e Zainab","raw_affiliation_strings":["Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019194095","display_name":"Muhammad Saleem","orcid":"https://orcid.org/0000-0001-9648-5417"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Muhammad Saleem","raw_affiliation_strings":["Universit\u00e4t Leipzig, IFI/AKSW, Leipzig, PO 100920, D-04009, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e4t Leipzig, IFI/AKSW, Leipzig, PO 100920, D-04009, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104359124","display_name":"Claude N. Warren","orcid":null},"institutions":[{"id":"https://openalex.org/I4210100977","display_name":"IBM (Ireland)","ror":"https://ror.org/0146h2h75","country_code":"IE","type":"company","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210100977"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Claude Warren","raw_affiliation_strings":["IBM, IDA Business Park, Galway, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IBM, IDA Business Park, Galway, Ireland","institution_ids":["https://openalex.org/I4210100977"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084372502","display_name":"Durre Zehra","orcid":null},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Durre Zehra","raw_affiliation_strings":["Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071104283","display_name":"Stefan Decker","orcid":"https://orcid.org/0000-0001-6324-7164"},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Stefan Decker","raw_affiliation_strings":["Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006224704","display_name":"Dietrich Rebholz\u2010Schuhmann","orcid":"https://orcid.org/0000-0002-1018-0370"},"institutions":[{"id":"https://openalex.org/I188760350","display_name":"Ollscoil na Gaillimhe \u2013 University of Galway","ror":"https://ror.org/03bea9k73","country_code":"IE","type":"education","lineage":["https://openalex.org/I188760350"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Dietrich Rebholz-Schuhmann","raw_affiliation_strings":["Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Insight Centre for Data Analytics, National University of Ireland (NUIG), Galway, Ireland","institution_ids":["https://openalex.org/I188760350"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5036637294"],"corresponding_institution_ids":["https://openalex.org/I188760350"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":3.4978,"has_fulltext":false,"cited_by_count":56,"citation_normalized_percentile":{"value":0.93556217,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"8","issue":"1","first_page":"13","last_page":"13"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.6607000231742859,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.6607000231742859,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.1476999968290329,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.0632999986410141,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8698267340660095},{"id":"https://openalex.org/keywords/sparql","display_name":"SPARQL","score":0.8431438207626343},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6137252449989319},{"id":"https://openalex.org/keywords/rdf","display_name":"RDF","score":0.5463869571685791},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.5216244459152222},{"id":"https://openalex.org/keywords/linked-data","display_name":"Linked data","score":0.47385862469673157},{"id":"https://openalex.org/keywords/query-expansion","display_name":"Query expansion","score":0.45388561487197876},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.41567325592041016},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32638025283813477},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.32462042570114136},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.256439208984375}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8698267340660095},{"id":"https://openalex.org/C41009113","wikidata":"https://www.wikidata.org/wiki/Q54871","display_name":"SPARQL","level":4,"score":0.8431438207626343},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6137252449989319},{"id":"https://openalex.org/C147497476","wikidata":"https://www.wikidata.org/wiki/Q54872","display_name":"RDF","level":3,"score":0.5463869571685791},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.5216244459152222},{"id":"https://openalex.org/C69075417","wikidata":"https://www.wikidata.org/wiki/Q515701","display_name":"Linked data","level":3,"score":0.47385862469673157},{"id":"https://openalex.org/C99016210","wikidata":"https://www.wikidata.org/wiki/Q5488129","display_name":"Query expansion","level":2,"score":0.45388561487197876},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.41567325592041016},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32638025283813477},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.32462042570114136},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.256439208984375},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s13326-017-0118-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0118-0","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0118-0","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:28298238","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28298238","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:http://www.rian.ie/160079/","is_oa":false,"landing_page_url":"http://hdl.handle.net/10379/11837","pdf_url":null,"source":{"id":"https://openalex.org/S4306400033","display_name":"Arrow@dit (Dublin Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I115570527","host_organization_name":"Dublin Institute of Technology","host_organization_lineage":["https://openalex.org/I115570527"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5353896","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5353896","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13326-017-0118-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-017-0118-0","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-017-0118-0","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5,"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12"}],"awards":[{"id":"https://openalex.org/G1383882326","display_name":null,"funder_award_id":"SFI/12/RC/","funder_id":"https://openalex.org/F4320320847","funder_display_name":"Science Foundation Ireland"},{"id":"https://openalex.org/G2881606312","display_name":null,"funder_award_id":"SFI/12/RC/2289","funder_id":"https://openalex.org/F4320320847","funder_display_name":"Science Foundation Ireland"},{"id":"https://openalex.org/G5098725405","display_name":null,"funder_award_id":"12/RC/","funder_id":"https://openalex.org/F4320320847","funder_display_name":"Science Foundation Ireland"},{"id":"https://openalex.org/G7362007176","display_name":"INSIGHT - Irelands Big Data and Analytics Research Centre","funder_award_id":"12/RC/2289","funder_id":"https://openalex.org/F4320320847","funder_display_name":"Science Foundation Ireland"}],"funders":[{"id":"https://openalex.org/F4320320847","display_name":"Science Foundation Ireland","ror":"https://ror.org/0271asj38"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2600074498.pdf","grobid_xml":"https://content.openalex.org/works/W2600074498.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W310749","https://openalex.org/W21038767","https://openalex.org/W153622350","https://openalex.org/W172995687","https://openalex.org/W1484056211","https://openalex.org/W1516511413","https://openalex.org/W1555486317","https://openalex.org/W1561051808","https://openalex.org/W1565421110","https://openalex.org/W1577293923","https://openalex.org/W1808100928","https://openalex.org/W1810256132","https://openalex.org/W1841919535","https://openalex.org/W1983094331","https://openalex.org/W2034103898","https://openalex.org/W2063007776","https://openalex.org/W2071108800","https://openalex.org/W2075694192","https://openalex.org/W2081193615","https://openalex.org/W2081623678","https://openalex.org/W2101918096","https://openalex.org/W2102240299","https://openalex.org/W2104060732","https://openalex.org/W2106980948","https://openalex.org/W2115072326","https://openalex.org/W2124850752","https://openalex.org/W2128105693","https://openalex.org/W2130538915","https://openalex.org/W2155261462","https://openalex.org/W2160926845","https://openalex.org/W2165901933","https://openalex.org/W2169569887","https://openalex.org/W2170454550","https://openalex.org/W2182242309","https://openalex.org/W2210169352","https://openalex.org/W2248646379","https://openalex.org/W2257508330","https://openalex.org/W2265585838","https://openalex.org/W2274744161","https://openalex.org/W2395471237","https://openalex.org/W2407987268","https://openalex.org/W2502357242","https://openalex.org/W6683929587"],"related_works":["https://openalex.org/W199330785","https://openalex.org/W2615202182","https://openalex.org/W2110486211","https://openalex.org/W2904139343","https://openalex.org/W2101525042","https://openalex.org/W98016204","https://openalex.org/W2767591199","https://openalex.org/W1591429950","https://openalex.org/W2596045049","https://openalex.org/W2563388676"],"abstract_inverted_index":{"BACKGROUND:":[0],"Biomedical":[1],"data,":[2,81],"e.g.":[3],"from":[4,197],"knowledge":[5],"bases":[6],"and":[7,77,92,114,132,153,181,194,243,253,288,304,330,355,388],"ontologies,":[8,413],"is":[9,25,208,238,263,322,364,374],"increasingly":[10],"made":[11],"available":[12,80],"following":[13],"open":[14],"linked":[15,209],"data":[16,34,48,108,124,196,249,256,286,363,396],"principles,":[17],"at":[18],"best":[19],"as":[20],"RDF":[21],"triple":[22,176],"data.":[23,213,279,298],"This":[24,403],"a":[26,264,267,270,366],"necessary":[27],"step":[28],"towards":[29],"unified":[30],"access":[31,113,287,306],"to":[32,41,49,71,74,85,117,137,189,210,228,307,337,343,370,376,392],"biological":[33],"sets,":[35],"but":[36,100,215],"this":[37],"still":[38,365],"requires":[39],"solutions":[40,57,83],"query":[42,61,134,171,234,283,358,419],"multiple":[43],"endpoints":[44,128,201,275],"for":[45,88,93,158,202,233,266,269,285,349,360,415],"their":[46],"heterogeneous":[47,326],"eventually":[50],"retrieve":[51],"all":[52],"the":[53,66,75,105,138,146,149,159,169,175,182,187,211,222,230,296,308,313,344,350,378,399,410],"meaningful":[54],"information.":[55,140],"Suggested":[56],"are":[58],"based":[59,239,311,323],"on":[60,240,312,324],"federation":[62],"approaches,":[63],"which":[64,247,339],"require":[65],"submission":[67,135],"of":[68,79,107,112,148,168,221,273,318,346,383,395,401,412,418],"SPARQL":[69,127,224,274,302,328,384],"queries":[70,329],"endpoints.":[72],"Due":[73],"size":[76],"complexity":[78],"these":[82],"have":[84,116],"be":[86,118,341,406],"optimised":[87],"efficient":[89,165,282,393],"retrieval":[90],"times":[91],"users":[94],"in":[95,110,129,250,293,335],"life":[96,130,160,277,361],"sciences":[97,131,362],"research.":[98],"Last":[99,214],"not":[101,216],"least,":[102,217],"over":[103,125,398],"time,":[104],"reliability":[106],"resources":[109,397],"terms":[111],"quality":[115],"monitored.":[119],"Our":[120,316],"solution":[121,151,265],"(BioFed)":[122],"federates":[123],"130":[126],"tailors":[133],"according":[136],"provenance":[139,206,291,347],"BioFed":[141,218,262,299,319],"has":[142],"been":[143],"evaluated":[144],"against":[145,320],"state":[147],"art":[150],"FedX":[152,321],"forms":[154,186],"an":[155],"important":[156],"benchmark":[157],"science":[161,278],"domain.":[162],"METHODS:":[163],"The":[164,236,381],"cataloguing":[166,382],"approach":[167],"federated":[170,203,327,357],"processing":[172],"system":[173],"'BioFed',":[174],"pattern":[177],"wise":[178],"source":[179,184,351,379],"selection":[180],"semantic":[183],"normalisation":[185,417],"core":[188],"our":[190,371],"solution.":[191],"It":[192,280],"gathers":[193],"integrates":[195],"newly":[198],"identified":[199],"public":[200],"access.":[204],"Basic":[205],"information":[207,292,348],"retrieved":[212,297],"makes":[219],"use":[220,411],"latest":[223],"standard":[225],"(i.e.,":[226],"1.1)":[227],"leverage":[229],"full":[231],"benefits":[232],"federation.":[235],"evaluation":[237,317],"10":[241,244,251],"simple":[242],"complex":[245],"queries,":[246],"address":[248],"major":[252],"very":[254],"popular":[255],"sources":[257],"(e.g.,":[258],"Dugbank,":[259],"Sider).":[260],"RESULTS:":[261],"single-point-of-access":[268],"large":[271],"number":[272],"providing":[276],"facilitates":[281],"generation":[284],"provides":[289],"basic":[290],"combination":[294],"with":[295],"fully":[300],"supports":[301],"1.1":[303],"gives":[305],"endpoint's":[309],"availability":[310],"EndpointData":[314],"graph.":[315],"20":[325],"shows":[331],"competitive":[332],"execution":[333],"performance":[334],"comparison":[336],"FedX,":[338],"can":[340],"attributed":[342],"provision":[345],"selection.":[352,380],"CONCLUSION:":[353],"Developing":[354],"testing":[356],"engines":[359],"challenging":[367],"task.":[368],"According":[369],"findings,":[372],"it":[373],"advantageous":[375],"optimise":[377],"endpoints,":[385],"including":[386],"type":[387],"property":[389],"indexing,":[390],"leads":[391],"querying":[394],"Web":[400],"Data.":[402],"could":[404],"even":[405],"further":[407],"improved":[408],"through":[409],"e.g.,":[414],"abstract":[416],"terms.":[420]},"counts_by_year":[{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":14},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
