{"id":"https://openalex.org/W2463981085","doi":"https://doi.org/10.1186/s13326-016-0084-y","title":"Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2","display_name":"Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2","publication_year":2016,"publication_date":"2016-07-01","ids":{"openalex":"https://openalex.org/W2463981085","doi":"https://doi.org/10.1186/s13326-016-0084-y","mag":"2463981085","pmid":"https://pubmed.ncbi.nlm.nih.gov/27370271"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-016-0084-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-016-0084-y","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/s13326-016-0084-y","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/s13326-016-0084-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077461380","display_name":"Danielle L. Mowery","orcid":"https://orcid.org/0000-0003-3802-4457"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Danielle L. Mowery","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA. danielle.mowery@utah.edu","Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA. danielle.mowery@utah.edu","institution_ids":[]},{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008552631","display_name":"Brett R. South","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brett R. South","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068888219","display_name":"Lee M. Christensen","orcid":"https://orcid.org/0000-0002-1161-9285"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lee Christensen","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073865015","display_name":"Jianwei Leng","orcid":"https://orcid.org/0000-0002-1862-2583"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jianwei Leng","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116387005","display_name":"Laura\u2010Maria Peltonen","orcid":"https://orcid.org/0000-0001-5740-6480"},"institutions":[{"id":"https://openalex.org/I2801970007","display_name":"Turku University Hospital","ror":"https://ror.org/05dbzj528","country_code":"FI","type":"healthcare","lineage":["https://openalex.org/I2801970007","https://openalex.org/I4210127022"]},{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Laura-Maria Peltonen","raw_affiliation_strings":["Nursing Science, University of Turku, and Turku University Hospital, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nursing Science, University of Turku, and Turku University Hospital, Turku, Finland","institution_ids":["https://openalex.org/I2801970007","https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077864708","display_name":"Sanna Salanter\u00e4","orcid":"https://orcid.org/0000-0003-2529-6699"},"institutions":[{"id":"https://openalex.org/I2801970007","display_name":"Turku University Hospital","ror":"https://ror.org/05dbzj528","country_code":"FI","type":"healthcare","lineage":["https://openalex.org/I2801970007","https://openalex.org/I4210127022"]},{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Sanna Salanter\u00e4","raw_affiliation_strings":["Nursing Science, University of Turku, and Turku University Hospital, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nursing Science, University of Turku, and Turku University Hospital, Turku, Finland","institution_ids":["https://openalex.org/I2801970007","https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059778915","display_name":"Hanna Suominen","orcid":"https://orcid.org/0000-0002-4195-1641"},"institutions":[{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"funder","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I118347636","display_name":"Australian National University","ror":"https://ror.org/019wvm592","country_code":"AU","type":"education","lineage":["https://openalex.org/I118347636"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I188329596","display_name":"University of Canberra","ror":"https://ror.org/04s1nv328","country_code":"AU","type":"education","lineage":["https://openalex.org/I188329596"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Hanna Suominen","raw_affiliation_strings":["Data61, CSIRO, The Australian National University, University of Canberra, and University of Turku, Locked Bag 8001, Canberra, 2601, ACT, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Data61, CSIRO, The Australian National University, University of Canberra, and University of Turku, Locked Bag 8001, Canberra, 2601, ACT, Australia","institution_ids":["https://openalex.org/I118347636","https://openalex.org/I1292875679","https://openalex.org/I42894916","https://openalex.org/I188329596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071033512","display_name":"David Mart\u00ednez","orcid":"https://orcid.org/0000-0002-8969-9318"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"David Martinez","raw_affiliation_strings":["MedWhat.com, San Francisco, CA, USA","University of Melbourne, Parkville, VIC, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MedWhat.com, San Francisco, CA, USA","institution_ids":[]},{"raw_affiliation_string":"University of Melbourne, Parkville, VIC, Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070579609","display_name":"Sumithra Velupillai","orcid":"https://orcid.org/0000-0002-4178-2980"},"institutions":[{"id":"https://openalex.org/I161593684","display_name":"Stockholm University","ror":"https://ror.org/05f0yaq80","country_code":"SE","type":"education","lineage":["https://openalex.org/I161593684"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Sumithra Velupillai","raw_affiliation_strings":["Department of Computer and Systems Sciences (DSV), Stockholm University, Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer and Systems Sciences (DSV), Stockholm University, Stockholm, Sweden","institution_ids":["https://openalex.org/I161593684"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047270546","display_name":"No\u00e9mie Elhadad","orcid":"https://orcid.org/0000-0001-9721-5240"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"No\u00e9mie Elhadad","raw_affiliation_strings":["Department of Biomedical Informatics, Columbia University, New York, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Columbia University, New York, NY, USA","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087865794","display_name":"Guergana Savova","orcid":"https://orcid.org/0000-0002-5887-200X"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guergana Savova","raw_affiliation_strings":["Boston Children's Hospital, Harvard Medical School, Boston, MA, USA","Boston Children\u2019s Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Boston Children's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Boston Children\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110598639","display_name":"Sameer Pradhan","orcid":null},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sameer Pradhan","raw_affiliation_strings":["Boston Children's Hospital, Harvard Medical School, Boston, MA, USA","Boston Children\u2019s Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Boston Children's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Boston Children\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065170642","display_name":"Wendy W. Chapman","orcid":"https://orcid.org/0000-0001-8702-4483"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wendy W. Chapman","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA","institution_ids":["https://openalex.org/I223532165"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5077461380"],"corresponding_institution_ids":["https://openalex.org/I223532165"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":2.2211,"has_fulltext":true,"cited_by_count":30,"citation_normalized_percentile":{"value":0.87868052,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"7","issue":"1","first_page":"43","last_page":"43"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8766999840736389,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8766999840736389,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.03700000047683716,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10737","display_name":"Health Literacy and Information Accessibility","score":0.007600000128149986,"subfield":{"id":"https://openalex.org/subfields/3600","display_name":"General Health Professions"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/clef","display_name":"Clef","score":0.9577719569206238},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7804697751998901},{"id":"https://openalex.org/keywords/ambiguity","display_name":"Ambiguity","score":0.6989246010780334},{"id":"https://openalex.org/keywords/ehealth","display_name":"eHealth","score":0.667585015296936},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5684773325920105},{"id":"https://openalex.org/keywords/vocabulary","display_name":"Vocabulary","score":0.5536851286888123},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5129220485687256},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5106173157691956},{"id":"https://openalex.org/keywords/question-answering","display_name":"Question answering","score":0.4838196635246277},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4831409156322479},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.46383532881736755},{"id":"https://openalex.org/keywords/baseline","display_name":"Baseline (sea)","score":0.4631902873516083},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.2742179334163666},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.14260053634643555}],"concepts":[{"id":"https://openalex.org/C107763842","wikidata":"https://www.wikidata.org/wiki/Q181040","display_name":"Clef","level":3,"score":0.9577719569206238},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7804697751998901},{"id":"https://openalex.org/C2780522230","wikidata":"https://www.wikidata.org/wiki/Q1140419","display_name":"Ambiguity","level":2,"score":0.6989246010780334},{"id":"https://openalex.org/C202645933","wikidata":"https://www.wikidata.org/wiki/Q4930","display_name":"eHealth","level":3,"score":0.667585015296936},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5684773325920105},{"id":"https://openalex.org/C2777601683","wikidata":"https://www.wikidata.org/wiki/Q6499736","display_name":"Vocabulary","level":2,"score":0.5536851286888123},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5129220485687256},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5106173157691956},{"id":"https://openalex.org/C44291984","wikidata":"https://www.wikidata.org/wiki/Q1074173","display_name":"Question answering","level":2,"score":0.4838196635246277},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4831409156322479},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.46383532881736755},{"id":"https://openalex.org/C12725497","wikidata":"https://www.wikidata.org/wiki/Q810247","display_name":"Baseline (sea)","level":2,"score":0.4631902873516083},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.2742179334163666},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.14260053634643555},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017216","descriptor_name":"Telemedicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017216","descriptor_name":"Telemedicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017216","descriptor_name":"Telemedicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":10,"locations":[{"id":"doi:10.1186/s13326-016-0084-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-016-0084-y","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/s13326-016-0084-y","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:27370271","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27370271","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/259368","is_oa":true,"landing_page_url":"http://hdl.handle.net/11343/259368","pdf_url":"http://hdl.handle.net/11343/259368","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:dash.harvard.edu:1/27822158","is_oa":true,"landing_page_url":"http://nrs.harvard.edu/urn-3:HUL.InstRepos:27822158","pdf_url":null,"source":{"id":"https://openalex.org/S4306401540","display_name":"Digital Access to Scholarship at Harvard (DASH) (Harvard University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:kclpure.kcl.ac.uk:openaire/e7176494-299e-43d6-8686-743f56270ab8","is_oa":true,"landing_page_url":"https://kclpure.kcl.ac.uk/portal/en/publications/e7176494-299e-43d6-8686-743f56270ab8","pdf_url":null,"source":{"id":"https://openalex.org/S4306400216","display_name":"Research Portal (King's College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183935753","host_organization_name":"King's College London","host_organization_lineage":["https://openalex.org/I183935753"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Mowery, D L, South, B R, Christensen, L, Leng, J, Peltonen, L-M, Salanter\u00e4, S, Suominen, H, Martinez, D, Velupillai, S, Elhadad, N, Savova, G, Pradhan, S & Chapman, W W 2016, 'Normalizing acronyms and abbreviations to aid patient understanding of clinical texts : ShARe/CLEF eHealth Challenge 2013, Task 2', Journal of biomedical semantics, vol. 7, no. 1, 43. https://doi.org/10.1186/s13326-016-0084-y","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:kclpure.kcl.ac.uk:publications/e7176494-299e-43d6-8686-743f56270ab8","is_oa":true,"landing_page_url":"https://www.scopus.com/inward/record.uri?eid=2-s2.0-84976876680&doi=10.1186%2fs13326-016-0084-y&partnerID=40&md5=c60dbb3e7e7764dd5a5819f589389141","pdf_url":null,"source":{"id":"https://openalex.org/S4306400216","display_name":"Research Portal (King's College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183935753","host_organization_name":"King's College London","host_organization_lineage":["https://openalex.org/I183935753"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Mowery , D L , South , B R , Christensen , L , Leng , J , Peltonen , L-M , Salanter\u00e4 , S , Suominen , H , Martinez , D , Velupillai , S , Elhadad , N , Savova , G , Pradhan , S &amp; Chapman , W W 2016 , ' Normalizing acronyms and abbreviations to aid patient understanding of clinical texts : ShARe/CLEF eHealth Challenge 2013, Task 2 ' , Journal of biomedical semantics , vol. 7 , no. 1 , 43 . https://doi.org/10.1186/s13326-016-0084-y","raw_type":"article"},{"id":"pmh:oai:openresearch-repository.anu.edu.au:1885/108919","is_oa":true,"landing_page_url":"http://hdl.handle.net/1885/108919","pdf_url":null,"source":{"id":"https://openalex.org/S4306402539","display_name":"ANU Open Research (Australian National University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I118347636","host_organization_name":"Australian National University","host_organization_lineage":["https://openalex.org/I118347636"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of biomedical semantics","raw_type":"Journal article"},{"id":"pmh:oai:openresearch-repository.anu.edu.au:1885/153535","is_oa":false,"landing_page_url":"http://hdl.handle.net/1885/153535","pdf_url":null,"source":{"id":"https://openalex.org/S4306402539","display_name":"ANU Open Research (Australian National University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I118347636","host_organization_name":"Australian National University","host_organization_lineage":["https://openalex.org/I118347636"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"Journal article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4930590","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4930590","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:tle:0cc85de3-dfce-45e7-b3f7-a7da7466bead:1f071524-0ffb-45dd-b0fd-e2ac8222ffc2:1","is_oa":true,"landing_page_url":"http://www.canberra.edu.au/researchrepository/items/0cc85de3-dfce-45e7-b3f7-a7da7466bead/1/","pdf_url":null,"source":{"id":"https://openalex.org/S7407050591","display_name":"University of Canberra Research Portal","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1186/s13326-016-0084-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-016-0084-y","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/s13326-016-0084-y","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8299999833106995,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G1449305495","display_name":null,"funder_award_id":"T15 LM007059","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G1658492139","display_name":null,"funder_award_id":"UL1 TR000002","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G2973790809","display_name":null,"funder_award_id":"FP7/2007-2013","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3829048491","display_name":null,"funder_award_id":"FP7/2007-2013","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G3840066543","display_name":null,"funder_award_id":"5T15LM007059","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G5138911815","display_name":null,"funder_award_id":"R01 GM090187","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G536623562","display_name":null,"funder_award_id":"FP7/2007-2013","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"},{"id":"https://openalex.org/G5593277320","display_name":null,"funder_award_id":"2007-2013","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5702163051","display_name":null,"funder_award_id":"FP7/2007","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6116908885","display_name":null,"funder_award_id":"2007-2013","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"},{"id":"https://openalex.org/G7650496259","display_name":"Knowledge Helper for Medical and Other Information users","funder_award_id":"257528","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320306127","display_name":"U.S. Department of Veterans Affairs","ror":"https://ror.org/05rsv9s98"},{"id":"https://openalex.org/F4320311025","display_name":"V\u00e5rdalstiftelsen","ror":"https://ror.org/00v6ky380"},{"id":"https://openalex.org/F4320315885","display_name":"Australian Government","ror":"https://ror.org/0314h5y94"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320320301","display_name":"European Science Foundation","ror":"https://ror.org/04esata81"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334704","display_name":"Australian Research Council","ror":"https://ror.org/05mmh0f86"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"},{"id":"https://openalex.org/F4320338080","display_name":"European Social Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2463981085.pdf","grobid_xml":"https://content.openalex.org/works/W2463981085.grobid-xml"},"referenced_works_count":67,"referenced_works":["https://openalex.org/W15359877","https://openalex.org/W28711288","https://openalex.org/W42510333","https://openalex.org/W55204438","https://openalex.org/W79139011","https://openalex.org/W103740995","https://openalex.org/W112847953","https://openalex.org/W116705248","https://openalex.org/W128190844","https://openalex.org/W157320947","https://openalex.org/W160173672","https://openalex.org/W185318260","https://openalex.org/W192539577","https://openalex.org/W274221391","https://openalex.org/W1504212872","https://openalex.org/W1513049111","https://openalex.org/W1550258693","https://openalex.org/W1579838312","https://openalex.org/W1594995996","https://openalex.org/W1656666520","https://openalex.org/W1841433433","https://openalex.org/W1853029403","https://openalex.org/W1933390880","https://openalex.org/W1977246967","https://openalex.org/W1984340934","https://openalex.org/W1987432294","https://openalex.org/W1991154713","https://openalex.org/W2023248478","https://openalex.org/W2057399676","https://openalex.org/W2061167720","https://openalex.org/W2068882115","https://openalex.org/W2073449354","https://openalex.org/W2095588973","https://openalex.org/W2096252540","https://openalex.org/W2109206523","https://openalex.org/W2116040937","https://openalex.org/W2122966699","https://openalex.org/W2124672726","https://openalex.org/W2125922179","https://openalex.org/W2132724073","https://openalex.org/W2138572839","https://openalex.org/W2145270227","https://openalex.org/W2146089916","https://openalex.org/W2149803936","https://openalex.org/W2153982529","https://openalex.org/W2156952734","https://openalex.org/W2157403527","https://openalex.org/W2157797617","https://openalex.org/W2162234949","https://openalex.org/W2163107094","https://openalex.org/W2167429950","https://openalex.org/W2168041406","https://openalex.org/W2189675008","https://openalex.org/W2292990913","https://openalex.org/W2293427160","https://openalex.org/W2294642121","https://openalex.org/W2395491654","https://openalex.org/W2397636431","https://openalex.org/W2404319920","https://openalex.org/W2413372017","https://openalex.org/W2497507960","https://openalex.org/W2915128229","https://openalex.org/W2915660087","https://openalex.org/W2916047559","https://openalex.org/W6634428159","https://openalex.org/W6759052712","https://openalex.org/W6759831810"],"related_works":["https://openalex.org/W2933726975","https://openalex.org/W1809817947","https://openalex.org/W182025740","https://openalex.org/W118585533","https://openalex.org/W2149348622","https://openalex.org/W2168375594","https://openalex.org/W151642146","https://openalex.org/W2118643475","https://openalex.org/W2396044781","https://openalex.org/W1989894969"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,165,193,327],"ShARe/CLEF":[2],"eHealth":[3],"challenge":[4],"lab":[5],"aims":[6],"to":[7,18,42,64,76,82,118,180,219,241,263,269,303,312,324,346],"stimulate":[8],"development":[9],"of":[10,46,59,88,111,126,142,160,195,276,297,351],"natural":[11],"language":[12],"processing":[13],"and":[14,30,137,153,235,245],"information":[15],"retrieval":[16],"technologies":[17],"aid":[19],"patients":[20,41],"in":[21,50],"understanding":[22,79,350],"their":[23],"clinical":[24,27,60],"reports.":[25],"In":[26,104],"text,":[28],"acronyms":[29],"abbreviations,":[31],"also":[32],"referenced":[33],"as":[34],"short":[35,61,90,95,115,130,200,277],"forms,":[36],"can":[37,73],"be":[38,74,313],"difficult":[39],"for":[40,129,198],"understand.":[43],"For":[44,290],"one":[45],"three":[47],"shared":[48,146],"tasks":[49],"2013":[51],"(Task":[52],"2),":[53],"we":[54,107],"generated":[55],"a":[56,98,119,158,314],"reference":[57,71],"standard":[58,72],"forms":[62,91,96,116,131,201],"normalized":[63,147],"the":[65,140,150,154,170,189,270,286,295,342],"Unified":[66],"Medical":[67],"Language":[68],"System.":[69],"This":[70],"used":[75],"improve":[77],"patient":[78,349],"by":[80,93,169],"linking":[81],"web":[83],"sources":[84],"with":[85,97,132,175,202,207,223,228,246,251,285,322,336],"lay":[86,101,161],"descriptions":[87],"annotated":[89],"or":[92,204,225,248],"substituting":[94],"more":[99,205,226,249],"simplified,":[100],"term.":[102],"METHODS:":[103],"this":[105],"study,":[106],"evaluate":[108],"1)":[109],"accuracy":[110,141],"participating":[112,143,172,196,298],"systems'":[113,144],"normalizing":[114,145,199],"compared":[117],"majority":[120,134,184],"sense":[121,135,185,211,232,255],"baseline":[122,186],"approach,":[123],"2)":[124],"performance":[125,194,296],"participants'":[127],"systems":[128,167,197,299,320],"variable":[133],"distributions,":[136],"3)":[138],"report":[139],"concepts":[148],"between":[149,233],"test":[151,272,344],"set":[152,345],"Consumer":[155,287,328],"Health":[156,288,329],"Vocabulary,":[157],"vocabulary":[159],"medical":[162,353],"terms.":[163,354],"RESULTS:":[164],"best":[166,191],"submitted":[168],"five":[171],"teams":[173],"performed":[174],"accuracies":[176],"ranging":[177],"from":[178,217,239,261,301,341],"43":[179],"72":[181],"%.":[182],"A":[183],"approach":[187],"achieved":[188],"second":[190],"performance.":[192],"two":[203,224,247],"senses":[206,227,250],"low":[208],"ambiguity":[209,230,253],"(majority":[210,231,254],"greater":[212],"than":[213,257],"80":[214,236],"%)":[215,237,259],"ranged":[216,238,260,300],"52":[218],"78":[220],"%":[221,243,265,275,305],"accuracy,":[222,244],"moderate":[229,323],"50":[234,258,302],"23":[240],"57":[242],"high":[252],"less":[256],"2":[262],"45":[264],"accuracy.":[266,306],"With":[267],"respect":[268],"ShARe":[271,343],"set,":[273],"69":[274],"form":[278,309,318],"annotations":[279],"contained":[280],"common":[281],"concept":[282,338],"unique":[283,339],"identifiers":[284,340],"Vocabulary.":[289],"these":[291],"2594":[292],"possible":[293],"annotations,":[294],"75":[304],"CONCLUSION:":[307],"Short":[308,317],"normalization":[310,319],"continues":[311],"challenging":[315],"problem.":[316],"perform":[321],"reasonable":[325],"accuracies.":[326],"Vocabulary":[330],"could":[331],"enrich":[332],"its":[333],"knowledge":[334],"base":[335],"missed":[337],"further":[347],"support":[348],"unfamiliar":[352]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":2}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
