{"id":"https://openalex.org/W2355033197","doi":"https://doi.org/10.1186/s13326-016-0070-4","title":"Filtering large-scale event collections using a combination of supervised and unsupervised learning for event trigger classification","display_name":"Filtering large-scale event collections using a combination of supervised and unsupervised learning for event trigger classification","publication_year":2016,"publication_date":"2016-05-11","ids":{"openalex":"https://openalex.org/W2355033197","doi":"https://doi.org/10.1186/s13326-016-0070-4","mag":"2355033197","pmid":"https://pubmed.ncbi.nlm.nih.gov/27175227"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-016-0070-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-016-0070-4","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-016-0070-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-016-0070-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086256360","display_name":"Farrokh Mehryary","orcid":"https://orcid.org/0000-0002-5555-2828"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Farrokh Mehryary","raw_affiliation_strings":["Department of Information Technology, University of Turku, Turku, Finland ; The University of Turku Graduate School (UTUGS), University of Turku, Turku, Finland","Department of Information Technology, University of Turku, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, University of Turku, Turku, Finland ; The University of Turku Graduate School (UTUGS), University of Turku, Turku, Finland","institution_ids":[]},{"raw_affiliation_string":"Department of Information Technology, University of Turku, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000080545","display_name":"Suwisa Kaewphan","orcid":"https://orcid.org/0000-0001-8534-1215"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Suwisa Kaewphan","raw_affiliation_strings":["Department of Information Technology, University of Turku, Turku, Finland ; The University of Turku Graduate School (UTUGS), University of Turku, Turku, Finland ; Turku Centre for Computer Science (TUCS), Turku, Finland","Department of Information Technology, University of Turku, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, University of Turku, Turku, Finland ; The University of Turku Graduate School (UTUGS), University of Turku, Turku, Finland ; Turku Centre for Computer Science (TUCS), Turku, Finland","institution_ids":[]},{"raw_affiliation_string":"Department of Information Technology, University of Turku, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058939594","display_name":"Kai Hakala","orcid":"https://orcid.org/0000-0001-8943-7011"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Kai Hakala","raw_affiliation_strings":["Department of Information Technology, University of Turku, Turku, Finland ; The University of Turku Graduate School (UTUGS), University of Turku, Turku, Finland","Department of Information Technology, University of Turku, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, University of Turku, Turku, Finland ; The University of Turku Graduate School (UTUGS), University of Turku, Turku, Finland","institution_ids":[]},{"raw_affiliation_string":"Department of Information Technology, University of Turku, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019929457","display_name":"Filip Ginter","orcid":"https://orcid.org/0000-0002-5484-6103"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Filip Ginter","raw_affiliation_strings":["Department of Information Technology, University of Turku, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, University of Turku, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5086256360"],"corresponding_institution_ids":["https://openalex.org/I155660961"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":0.0,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.02306261,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"7","issue":"1","first_page":"27","last_page":"27"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.002099999925121665,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8750066757202148},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.6943888664245605},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.6462646722793579},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6122365593910217},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5780941843986511},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.5769503116607666},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5579574704170227},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5189040303230286},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.47055697441101074},{"id":"https://openalex.org/keywords/unsupervised-learning","display_name":"Unsupervised learning","score":0.4490927457809448},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4405691623687744},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.43954694271087646},{"id":"https://openalex.org/keywords/word","display_name":"Word (group theory)","score":0.4314066171646118},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.4194405674934387},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4143146276473999},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3880043923854828},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3827313482761383},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.13821089267730713}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8750066757202148},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.6943888664245605},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.6462646722793579},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6122365593910217},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5780941843986511},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.5769503116607666},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5579574704170227},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5189040303230286},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.47055697441101074},{"id":"https://openalex.org/C8038995","wikidata":"https://www.wikidata.org/wiki/Q1152135","display_name":"Unsupervised learning","level":2,"score":0.4490927457809448},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4405691623687744},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.43954694271087646},{"id":"https://openalex.org/C90805587","wikidata":"https://www.wikidata.org/wiki/Q10944557","display_name":"Word (group theory)","level":2,"score":0.4314066171646118},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.4194405674934387},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4143146276473999},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3880043923854828},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3827313482761383},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.13821089267730713},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069558","descriptor_name":"Unsupervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069558","descriptor_name":"Unsupervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069558","descriptor_name":"Unsupervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/s13326-016-0070-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-016-0070-4","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-016-0070-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:27175227","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27175227","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4864999","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4864999","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13326-016-0070-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-016-0070-4","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-016-0070-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322603","display_name":"Universiteit Gent","ror":"https://ror.org/00cv9y106"},{"id":"https://openalex.org/F4320323313","display_name":"Turun Yliopisto","ror":"https://ror.org/05vghhr25"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2355033197.pdf","grobid_xml":"https://content.openalex.org/works/W2355033197.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W76749362","https://openalex.org/W1614298861","https://openalex.org/W1964670939","https://openalex.org/W2031966872","https://openalex.org/W2032566933","https://openalex.org/W2041187413","https://openalex.org/W2095023795","https://openalex.org/W2096173332","https://openalex.org/W2096525273","https://openalex.org/W2103017472","https://openalex.org/W2108791029","https://openalex.org/W2122496897","https://openalex.org/W2130538915","https://openalex.org/W2131284830","https://openalex.org/W2134967412","https://openalex.org/W2143892076","https://openalex.org/W2147154106","https://openalex.org/W2159482845","https://openalex.org/W2162371815","https://openalex.org/W2171518327","https://openalex.org/W2251279337","https://openalex.org/W2251814321","https://openalex.org/W2251988705","https://openalex.org/W2527896214","https://openalex.org/W2914431807","https://openalex.org/W2916355958","https://openalex.org/W2923652028","https://openalex.org/W4245543257","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W1989010305","https://openalex.org/W4362496998","https://openalex.org/W2184397297","https://openalex.org/W1663435917","https://openalex.org/W2810079151","https://openalex.org/W2103320915","https://openalex.org/W2616159224","https://openalex.org/W2572241437","https://openalex.org/W2164881856","https://openalex.org/W3082330004"],"abstract_inverted_index":{"BACKGROUND:":[0],"Biomedical":[1],"event":[2,66,97,114,135,244,290],"extraction":[3,245,291],"is":[4,61,169,214,271],"one":[5],"of":[6,27,50,65,103,181,198,221,241,255,266,288],"the":[7,48,51,101,118,138,165,196,204,217,232,239,242,264,267,276,286],"key":[8],"tasks":[9],"in":[10],"biomedical":[11,120],"text":[12],"mining,":[13],"supporting":[14],"various":[15],"applications":[16],"such":[17],"as":[18,58,178],"database":[19,136],"curation":[20],"and":[21,68,122,125,141,164,208,279,298],"hypothesis":[22],"generation.":[23],"Several":[24],"systems,":[25],"some":[26],"which":[28],"have":[29,36,45],"been":[30,37],"applied":[31],"at":[32],"a":[33,62,87,191],"large":[34],"scale,":[35],"introduced":[38],"to":[39,171,237,275,284],"solve":[40],"this":[41,80,83,302],"task.":[42],"Past":[43],"studies":[44],"shown":[46],"that":[47,174,231],"identification":[49],"phrases":[52],"describing":[53],"biological":[54],"processes,":[55],"also":[56,250],"known":[57],"trigger":[59,159,187,199],"detection,":[60],"crucial":[63],"part":[64],"extraction,":[67],"notable":[69],"overall":[70],"performance":[71,240],"gains":[72],"can":[73,175,234,280],"be":[74,235,281],"obtained":[75],"by":[76,203],"solely":[77,273],"focusing":[78],"on":[79,110,132,195,216,225],"sub-task.":[81],"In":[82],"paper":[84],"we":[85,189],"propose":[86],"novel":[88],"approach":[89,193],"for":[90,301],"filtering":[91],"falsely":[92],"identified":[93],"triggers":[94,179],"from":[95,117,259],"large-scale":[96],"databases,":[98],"thus":[99,261,282],"improving":[100,263],"quality":[102,265,287],"knowledge":[104],"extraction.":[105],"METHODS:":[106],"Our":[107],"method":[108,207,213,233,270],"relies":[109],"state-of-the-art":[111,243],"word":[112,200],"embeddings,":[113],"statistics":[115],"gathered":[116],"whole":[119,139],"literature,":[121],"both":[123],"supervised":[124,192],"unsupervised":[126,205],"machine":[127],"learning":[128],"techniques.":[129],"We":[130],"focus":[131],"EVEX,":[133,260],"an":[134],"covering":[137],"PubMed":[140,142],"Central":[143],"Open":[144],"Access":[145],"literature":[146],"containing":[147],"more":[148],"than":[149],"40":[150],"million":[151],"extracted":[152],"events.":[153],"The":[154,212,228,269,296],"top":[155],"most":[156],"frequent":[157],"EVEX":[158,277],"words":[160,173,188],"are":[161,304],"hierarchically":[162],"clustered,":[163],"resulting":[166],"cluster":[167],"tree":[168],"pruned":[170],"identify":[172],"never":[176],"act":[177],"regardless":[180],"their":[182],"context.":[183],"For":[184],"rarely":[185],"occurring":[186],"introduce":[190],"trained":[194],"combination":[197],"classification":[201],"produced":[202],"clustering":[206],"manual":[209],"annotation.":[210],"RESULTS:":[211],"evaluated":[215],"official":[218],"test":[219],"set":[220],"BioNLP":[222],"Shared":[223],"Task":[224],"Event":[226],"Extraction.":[227],"evaluation":[229],"shows":[230],"used":[236,283],"improve":[238,285],"systems.":[246],"This":[247],"successful":[248],"effort":[249],"translates":[251],"into":[252],"removing":[253],"1,338,075":[254],"potentially":[256],"incorrect":[257],"events":[258],"greatly":[262],"data.":[268],"not":[272],"bound":[274],"resource":[278],"any":[289],"system":[292],"or":[293],"database.":[294],"AVAILABILITY:":[295],"data":[297],"source":[299],"code":[300],"work":[303],"available":[305],"at:":[306],"http://bionlp-www.utu.fi/trigger-clustering/.":[307]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
