{"id":"https://openalex.org/W2313724773","doi":"https://doi.org/10.1186/s13326-015-0044-y","title":"miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases","display_name":"miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases","publication_year":2016,"publication_date":"2016-03-02","ids":{"openalex":"https://openalex.org/W2313724773","doi":"https://doi.org/10.1186/s13326-015-0044-y","mag":"2313724773","pmid":"https://pubmed.ncbi.nlm.nih.gov/27216254"},"language":"en","primary_location":{"id":"doi:10.1186/s13326-015-0044-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-015-0044-y","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-015-0044-y","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-015-0044-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080648304","display_name":"Samir Gupta","orcid":"https://orcid.org/0000-0003-2656-3912"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Samir Gupta","raw_affiliation_strings":["Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA. sgupta@udel.edu","Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA. sgupta@udel.edu","institution_ids":[]},{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010355751","display_name":"Karen Ross","orcid":"https://orcid.org/0000-0003-4633-6055"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Karen E. Ross","raw_affiliation_strings":["Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019996064","display_name":"Catalina O. Tudor","orcid":"https://orcid.org/0009-0002-0420-7589"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Catalina O. Tudor","raw_affiliation_strings":["Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA","Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA","institution_ids":["https://openalex.org/I86501945"]},{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053761444","display_name":"Cathy Wu","orcid":"https://orcid.org/0000-0001-6379-8601"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cathy H. Wu","raw_affiliation_strings":["Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA","Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA","institution_ids":["https://openalex.org/I86501945"]},{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004246605","display_name":"Carl J. Schmidt","orcid":"https://orcid.org/0000-0002-8386-4781"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carl J. Schmidt","raw_affiliation_strings":["Department of Food and Animal Sciences, University of Delaware, Newark, DE, 19711, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Food and Animal Sciences, University of Delaware, Newark, DE, 19711, USA","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027009667","display_name":"K. Vijay\u2010Shanker","orcid":"https://orcid.org/0000-0003-0958-3073"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. Vijay-Shanker","raw_affiliation_strings":["Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA","institution_ids":["https://openalex.org/I86501945"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5080648304"],"corresponding_institution_ids":["https://openalex.org/I86501945"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":0.9297,"has_fulltext":true,"cited_by_count":23,"citation_normalized_percentile":{"value":0.73435512,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"7","issue":"1","first_page":"9","last_page":"9"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.6365000009536743,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.6365000009536743,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.1459999978542328,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.012799999676644802,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.688956618309021},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6613062620162964},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5894466042518616},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.5402382016181946},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5319761633872986},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.4729228615760803},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.46500739455223083},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.4281689524650574},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.4214613735675812},{"id":"https://openalex.org/keywords/association-rule-learning","display_name":"Association rule learning","score":0.41796618700027466},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.37369993329048157},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3528066873550415},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2394346296787262},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.22210851311683655},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.20271313190460205},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.20165488123893738},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16423887014389038},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.1429717242717743},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.07833042740821838}],"concepts":[{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.688956618309021},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6613062620162964},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5894466042518616},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.5402382016181946},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5319761633872986},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.4729228615760803},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.46500739455223083},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.4281689524650574},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.4214613735675812},{"id":"https://openalex.org/C193524817","wikidata":"https://www.wikidata.org/wiki/Q386780","display_name":"Association rule learning","level":2,"score":0.41796618700027466},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.37369993329048157},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3528066873550415},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2394346296787262},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.22210851311683655},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.20271313190460205},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.20165488123893738},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16423887014389038},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.1429717242717743},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.07833042740821838},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s13326-015-0044-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-015-0044-y","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-015-0044-y","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:27216254","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27216254","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4877743","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4877743","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:oai:udspace.udel.edu:19716/21573","is_oa":true,"landing_page_url":"http://udspace.udel.edu/handle/19716/21573","pdf_url":null,"source":{"id":"https://openalex.org/S4377196565","display_name":"Library, Museums and Press - UDSpace (University of Delaware)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I86501945","host_organization_name":"University of Delaware","host_organization_lineage":["https://openalex.org/I86501945"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1186/s13326-015-0044-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13326-015-0044-y","pdf_url":"https://jbiomedsem.biomedcentral.com/track/pdf/10.1186/s13326-015-0044-y","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5899999737739563,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2313724773.pdf","grobid_xml":"https://content.openalex.org/works/W2313724773.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W192665053","https://openalex.org/W1781296532","https://openalex.org/W1964670939","https://openalex.org/W1973329326","https://openalex.org/W1986579413","https://openalex.org/W2001051750","https://openalex.org/W2016106370","https://openalex.org/W2028998834","https://openalex.org/W2030815417","https://openalex.org/W2034845419","https://openalex.org/W2048984063","https://openalex.org/W2060942759","https://openalex.org/W2064314529","https://openalex.org/W2069870183","https://openalex.org/W2075027317","https://openalex.org/W2097325727","https://openalex.org/W2103151642","https://openalex.org/W2105217514","https://openalex.org/W2106857388","https://openalex.org/W2114402182","https://openalex.org/W2128768066","https://openalex.org/W2130200371","https://openalex.org/W2133658633","https://openalex.org/W2135283418","https://openalex.org/W2142016317","https://openalex.org/W2143331230","https://openalex.org/W2145848169","https://openalex.org/W2148694583","https://openalex.org/W2156132739","https://openalex.org/W2158135353","https://openalex.org/W2158866358","https://openalex.org/W2163106706","https://openalex.org/W2166339213","https://openalex.org/W2168964544","https://openalex.org/W2315983151","https://openalex.org/W6658152889","https://openalex.org/W6681369196"],"related_works":["https://openalex.org/W83344948","https://openalex.org/W2393581236","https://openalex.org/W1143447605","https://openalex.org/W2001121861","https://openalex.org/W4205099120","https://openalex.org/W2290512328","https://openalex.org/W1649881489","https://openalex.org/W2912681691","https://openalex.org/W3134610483","https://openalex.org/W2576206898"],"abstract_inverted_index":{"BACKGROUND:":[0],"MicroRNAs":[1],"are":[2,27,161,170,234,380],"increasingly":[3],"being":[4],"appreciated":[5],"as":[6,361,396],"critical":[7],"players":[8],"in":[9,20,57,80,110,141,311,368,373,412,420],"human":[10],"diseases,":[11],"and":[12,108,128,131,154,166,230,245,262,316,359],"questions":[13],"concerning":[14],"the":[15,37,53,58,81,111,123,157,167,175,181,206,211,218,231,243,274,345,369,413],"role":[16,370],"of":[17,23,32,46,55,70,83,105,113,247,253,269,283,289,302,307,313,339,347,371,403,415,423],"microRNAs":[18,153,372,419],"arise":[19],"many":[21],"areas":[22],"biomedical":[24,38,176,292,365],"research.":[25],"There":[26],"several":[28],"manually":[29],"curated":[30],"databases":[31,48],"microRNA-disease":[33,59,71,207,258,284,340,349,393],"associations":[34,72,151,160,233],"gathered":[35],"from":[36,156],"literature;":[39],"however,":[40],"it":[41],"is":[42,89],"difficult":[43],"for":[44,174,188,236,364],"curators":[45,260],"these":[47],"to":[49,93,116,122,129,199,217,251,256,276,291,322],"keep":[50],"up":[51],"with":[52,119,143,185,225,249,279,299],"explosion":[54],"publications":[56],"field.":[60],"Moreover,":[61],"automated":[62,97],"literature":[63,98],"mining":[64,99],"tools":[65,100],"that":[66,101,148,196,286,333,387],"assist":[67],"manual":[68,133,356],"curation":[69,357],"currently":[73],"capture":[74,102,335],"only":[75],"one":[76,84],"microRNA":[77,106,401],"property":[78],"(expression)":[79],"context":[82,112],"disease":[85],"(cancer).":[86],"Thus,":[87,178],"there":[88,410],"a":[90,103,145,194,267,280,300,329,336,362,406],"clear":[91],"need":[92],"develop":[94],"more":[95],"sophisticated":[96],"variety":[104,338],"properties":[107],"relations":[109,169],"multiple":[114],"diseases":[115,155,399],"provide":[117],"researchers":[118,366],"fast":[120],"access":[121],"most":[124],"recent":[125],"published":[126],"information":[127,252,285],"streamline":[130],"accelerate":[132],"curation.":[134],"METHODS:":[135],"We":[136,191,241],"have":[137],"developed":[138,193],"miRiaD":[139,179,214,248,294,384],"(microRNAs":[140],"association":[142],"Disease),":[144],"text-mining":[146],"tool":[147],"automatically":[149],"extracts":[150,180],"between":[152],"literature.":[158],"These":[159,228],"often":[162,171],"not":[163],"directly":[164],"linked,":[165],"intermediate":[168],"highly":[172],"informative":[173],"researcher.":[177],"miR-disease":[182,226,232],"pairs":[183],"together":[184],"an":[186,323,382],"explanation":[187],"their":[189,202],"association.":[190],"also":[192,295],"procedure":[195],"assigns":[197],"scores":[198],"sentences,":[200],"marking":[201],"informativeness,":[203],"based":[204],"on":[205],"relation":[208],"observed":[209],"within":[210],"sentence.":[212],"RESULTS:":[213],"was":[215,309],"applied":[216],"entire":[219],"Medline":[220],"corpus,":[221],"identifying":[222],"8301":[223],"PMIDs":[224],"associations.":[227],"abstracts":[229],"available":[235],"browsing":[237],"at":[238],"http://biotm.cis.udel.edu/miRiaD":[239],".":[240],"evaluated":[242,310],"recall":[244,268],"precision":[246],"respect":[250],"high":[254,330],"interest":[255,290],"public":[257],"database":[259],"(expression":[261],"target":[263],"gene":[264],"associations),":[265],"obtaining":[266],"88.46-90.78.":[270],"When":[271],"we":[272,379],"expanded":[273],"evaluation":[275],"include":[277],"sentences":[278,308],"wide":[281,337],"range":[282],"may":[287],"be":[288,353],"researchers,":[293],"performed":[296],"very":[297],"well":[298],"F-score":[301],"89.4.":[303],"The":[304],"informativeness":[305],"ranking":[306],"terms":[312],"nDCG":[314],"(0.977)":[315],"correlation":[317],"metrics":[318],"(0.678-0.727)":[319],"when":[320],"compared":[321],"annotator's":[324],"ranked":[325],"list.":[326],"CONCLUSIONS:":[327],"miRiaD,":[328],"performance":[331],"system":[332],"can":[334,352],"related":[341],"information,":[342],"extends":[343],"beyond":[344],"scope":[346],"existing":[348],"resources.":[350],"It":[351],"incorporated":[354],"into":[355],"pipelines":[358],"serve":[360],"resource":[363],"interested":[367],"disease.":[374],"In":[375],"our":[376],"ongoing":[377],"work":[378],"developing":[381],"improved":[383],"web":[385],"interface":[386],"will":[388],"facilitate":[389],"complex":[390],"queries":[391],"about":[392],"relationships,":[394],"such":[395],"\"In":[397],"what":[398],"does":[400],"regulation":[402],"apoptosis":[404],"play":[405],"role?\"":[407],"or":[408],"\"Is":[409],"overlap":[411],"sets":[414],"genes":[416],"targeted":[417],"by":[418],"different":[421],"types":[422],"dementia?\".\"":[424]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
