{"id":"https://openalex.org/W4411492298","doi":"https://doi.org/10.1186/s13321-025-01044-x","title":"Shinyscreen: mass spectrometry data inspection and quality checking utility","display_name":"Shinyscreen: mass spectrometry data inspection and quality checking utility","publication_year":2025,"publication_date":"2025-06-20","ids":{"openalex":"https://openalex.org/W4411492298","doi":"https://doi.org/10.1186/s13321-025-01044-x","pmid":"https://pubmed.ncbi.nlm.nih.gov/40542438"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-025-01044-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-025-01044-x","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-025-01044-x","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-025-01044-x","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031800436","display_name":"Todor Kondi\u0107","orcid":"https://orcid.org/0000-0001-6662-4375"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":true,"raw_author_name":"Todor Kondi\u0107","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg"],"raw_orcid":"https://orcid.org/0000-0001-6662-4375","affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092440998","display_name":"Anjana Elapavalore","orcid":"https://orcid.org/0000-0002-0295-6618"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Anjana Elapavalore","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg. anjana.elapavalore@uni.lu"],"raw_orcid":"https://orcid.org/0000-0002-0295-6618","affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg. anjana.elapavalore@uni.lu","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050146377","display_name":"Jessy Krier","orcid":"https://orcid.org/0000-0001-6986-5545"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Jessy Krier","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg"],"raw_orcid":"https://orcid.org/0000-0001-6986-5545","affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039069854","display_name":"Adelene Lai","orcid":"https://orcid.org/0000-0002-2985-6473"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["DE","LU"],"is_corresponding":false,"raw_author_name":"Adelene Lai","raw_affiliation_strings":["Institute for Inorganic and Analytical Chemistry, Friedrich-Schiller University, Lessing Strasse 8, 07743, Jena, Germany","Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg"],"raw_orcid":"https://orcid.org/0000-0002-2985-6473","affiliations":[{"raw_affiliation_string":"Institute for Inorganic and Analytical Chemistry, Friedrich-Schiller University, Lessing Strasse 8, 07743, Jena, Germany","institution_ids":["https://openalex.org/I76198965"]},{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045287762","display_name":"Hiba Mohammed Taha","orcid":"https://orcid.org/0000-0001-7820-4335"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Hiba Mohammed Taha","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg"],"raw_orcid":"https://orcid.org/0000-0001-7820-4335","affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013992750","display_name":"M. Narayanan","orcid":"https://orcid.org/0000-0001-5428-8183"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Mira Narayanan","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg"],"raw_orcid":"https://orcid.org/0000-0001-5428-8183","affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016319274","display_name":"Emma Schymanski","orcid":"https://orcid.org/0000-0001-6868-8145"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Emma L. Schymanski","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg. emma.schymanski@uni.lu"],"raw_orcid":"https://orcid.org/0000-0001-6868-8145","affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, 6 Avenue du Swing, 4367, Belvaux, Luxembourg. emma.schymanski@uni.lu","institution_ids":["https://openalex.org/I186903577"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5031800436"],"corresponding_institution_ids":["https://openalex.org/I186903577"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.1247044,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"17","issue":"1","first_page":"98","last_page":"98"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12073","display_name":"Isotope Analysis in Ecology","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.9753000140190125,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8102542161941528},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.6985076069831848},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6629678010940552},{"id":"https://openalex.org/keywords/vendor","display_name":"Vendor","score":0.5192320942878723},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.48984548449516296},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.4668278098106384},{"id":"https://openalex.org/keywords/data-quality","display_name":"Data quality","score":0.4529716372489929},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.44909438490867615},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.38074591755867004},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.32078492641448975}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8102542161941528},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.6985076069831848},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6629678010940552},{"id":"https://openalex.org/C2777338717","wikidata":"https://www.wikidata.org/wiki/Q1762621","display_name":"Vendor","level":2,"score":0.5192320942878723},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.48984548449516296},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.4668278098106384},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.4529716372489929},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.44909438490867615},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.38074591755867004},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.32078492641448975},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/s13321-025-01044-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-025-01044-x","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-025-01044-x","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:40542438","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40542438","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:orbilu.uni.lu:10993/65310","is_oa":true,"landing_page_url":"https://orbilu.uni.lu/handle/10993/65310","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Journal of Cheminformatics, 17 (1), 98 (2025-06-20)","raw_type":"peer reviewed"},{"id":"pmh:oai:doaj.org/article:58259dde5d484fabb23c86a44d9f9bb4","is_oa":true,"landing_page_url":"https://doaj.org/article/58259dde5d484fabb23c86a44d9f9bb4","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, Vol 17, Iss 1, Pp 1-11 (2025)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:12181873","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12181873","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13321-025-01044-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-025-01044-x","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-025-01044-x","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1731480922","display_name":null,"funder_award_id":"A18/BM/12341006","funder_id":"https://openalex.org/F4320321038","funder_display_name":"Fonds National de la Recherche Luxembourg"},{"id":"https://openalex.org/G643302094","display_name":null,"funder_award_id":"101057014","funder_id":"https://openalex.org/F4320334322","funder_display_name":"HORIZON EUROPE Framework Programme"},{"id":"https://openalex.org/G8256239485","display_name":null,"funder_award_id":"101057014","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8284467538","display_name":null,"funder_award_id":"12341006","funder_id":"https://openalex.org/F4320321038","funder_display_name":"Fonds National de la Recherche Luxembourg"}],"funders":[{"id":"https://openalex.org/F4320310700","display_name":"Universit\u00e9 du Luxembourg","ror":"https://ror.org/036x5ad56"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321038","display_name":"Fonds National de la Recherche Luxembourg","ror":"https://ror.org/039z13y21"},{"id":"https://openalex.org/F4320334322","display_name":"HORIZON EUROPE Framework Programme","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4411492298.pdf","grobid_xml":"https://content.openalex.org/works/W4411492298.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1975147762","https://openalex.org/W2023442988","https://openalex.org/W2052388444","https://openalex.org/W2108731397","https://openalex.org/W2285468881","https://openalex.org/W2320251384","https://openalex.org/W3046858608","https://openalex.org/W3083984300","https://openalex.org/W3120715532","https://openalex.org/W3133965623","https://openalex.org/W3190293834","https://openalex.org/W3201555178","https://openalex.org/W3216402340","https://openalex.org/W4245419386","https://openalex.org/W4254687493","https://openalex.org/W4383824408","https://openalex.org/W4386409496","https://openalex.org/W4402813461","https://openalex.org/W4406787522"],"related_works":["https://openalex.org/W2478661203","https://openalex.org/W2944823289","https://openalex.org/W2004830053","https://openalex.org/W3037018281","https://openalex.org/W3008115697","https://openalex.org/W2349167760","https://openalex.org/W2003209439","https://openalex.org/W2972511296","https://openalex.org/W3033117735","https://openalex.org/W2746208547"],"abstract_inverted_index":{"Shinyscreen":[0,63,87,103,148,194],"is":[1,104,136,149],"an":[2,72,75,186],"R":[3,73],"package":[4],"and":[5,14,96,123,134,226],"Shiny-based":[6],"web":[7,81],"application":[8,155,183],"designed":[9,130],"for":[10,121,131,200],"the":[11,31,112,143,160,166,220],"exploration,":[12],"visualization,":[13],"quality":[15,163,196,224],"assessment":[16],"of":[17,33,165,168,198,205,222],"raw":[18],"data":[19,34,199,209,223],"from":[20,36],"high":[21,161,172],"resolution":[22,173],"mass":[23,174,191],"spectrometry":[24,175,192],"instruments.":[25],"Its":[26],"versatile":[27],"list-based":[28,43,49],"approach":[29],"supports":[30,195],"curation":[32],"starting":[35],"either":[37],"known":[38],"or":[39,45,60,83,203],"\"suspected\"":[40],"compounds":[41],"(compound":[42],"screening)":[44],"detected":[46,170],"masses":[47],"(mass":[48],"screening),":[50],"making":[51],"it":[52,184],"adaptable":[53],"to":[54,156,207,216],"diverse":[55],"analytical":[56],"needs":[57],"(target,":[58],"suspect":[59],"non-target":[61],"screening).":[62],"can":[64],"be":[65],"operated":[66],"in":[67,91,106,142,159,171,189],"multiple":[68],"modes,":[69],"including":[70],"as":[71,211,213],"package,":[74],"interactive":[76],"command-line":[77],"tool,":[78],"a":[79,84,126,150,178],"self-documented":[80],"GUI,":[82],"network-deployable":[85],"service.":[86],"has":[88],"been":[89],"applied":[90],"environmental":[92],"research,":[93],"database":[94],"enrichment,":[95],"educational":[97],"initiatives,":[98],"showcasing":[99],"its":[100],"broad":[101],"utility.":[102],"available":[105],"GitLab":[107],"(":[108],"https://gitlab.com/uniluxembourg/lcsb/eci/shinyscreen":[109],")":[110],"under":[111],"Apache":[113],"License":[114],"2.0.":[115],"The":[116],"repository":[117],"contains":[118],"detailed":[119],"instructions":[120,139],"deployment":[122],"use.":[124],"Additionally,":[125],"pre-configured":[127],"Docker":[128],"image,":[129],"seamless":[132],"installation":[133],"operation":[135],"available,":[137],"with":[138],"also":[140],"provided":[141],"main":[144],"repository.":[145],"Scientific":[146],"Contribution:":[147],"fully":[151],"open":[152,190],"source":[153],"prescreening":[154],"assist":[157],"analysts":[158],"throughput":[162],"control":[164,197,225],"thousands":[167],"peaks":[169],"experiments.":[176],"As":[177],"vendor-independent,":[179],"cross":[180],"operating":[181],"system":[182],"covers":[185],"important":[187],"niche":[188],"workflows.":[193],"further":[201],"identification":[202,228],"upload":[204],"spectra":[206],"public":[208],"resources,":[210],"well":[212],"teaching":[214],"efforts":[215],"educate":[217],"students":[218],"on":[219],"importance":[221],"rigorous":[227],"methods.":[229]},"counts_by_year":[],"updated_date":"2026-02-28T06:14:18.631764","created_date":"2025-10-10T00:00:00"}
