{"id":"https://openalex.org/W4394812234","doi":"https://doi.org/10.1186/s13321-024-00839-8","title":"PermuteDDS: a permutable feature fusion network for drug-drug synergy prediction","display_name":"PermuteDDS: a permutable feature fusion network for drug-drug synergy prediction","publication_year":2024,"publication_date":"2024-04-15","ids":{"openalex":"https://openalex.org/W4394812234","doi":"https://doi.org/10.1186/s13321-024-00839-8"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-024-00839-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-024-00839-8","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-024-00839-8","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-024-00839-8","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101857711","display_name":"Xinwei Zhao","orcid":"https://orcid.org/0000-0002-4328-4846"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xinwei Zhao","raw_affiliation_strings":["Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101369210","display_name":"Junqing Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junqing Xu","raw_affiliation_strings":["The Second Clinical Medical School, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Second Clinical Medical School, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5095692696","display_name":"Youyuan Shui","orcid":null},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Youyuan Shui","raw_affiliation_strings":["Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009724929","display_name":"Mengdie Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mengdie Xu","raw_affiliation_strings":["Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054394343","display_name":"Jie Hu","orcid":"https://orcid.org/0000-0003-2940-6525"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jie Hu","raw_affiliation_strings":["Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","Institute of Medical Informatics and Management, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 210029, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"Institute of Medical Informatics and Management, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 210029, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054513626","display_name":"Xiaoyan Liu","orcid":"https://orcid.org/0000-0002-2409-8941"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoyan Liu","raw_affiliation_strings":["Faculty of Computing, Harbin Institute of Technology, No. 92 West Da Zhi St, Harbin, 150001, Heilongjiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computing, Harbin Institute of Technology, No. 92 West Da Zhi St, Harbin, 150001, Heilongjiang, China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078036422","display_name":"Kai Che","orcid":"https://orcid.org/0009-0008-7153-0224"},"institutions":[{"id":"https://openalex.org/I4210147538","display_name":"Airborne International (Netherlands)","ror":"https://ror.org/04kwv2n58","country_code":"NL","type":"company","lineage":["https://openalex.org/I4210147538"]},{"id":"https://openalex.org/I4210133467","display_name":"Xi'an Aeronautical University","ror":"https://ror.org/03qn8zy63","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210133467"]}],"countries":["CN","NL"],"is_corresponding":false,"raw_author_name":"Kai Che","raw_affiliation_strings":["Aviation Key Laboratory of Science and Technology on Airborne and Missleborne Computer, Xi\u2019an, 710065, Shanxi, China","Xi\u2019an Aeronautics Computing Technique Research Institute, AVIC, No. 156, TaiBai Nroth Road, Xi\u2019an, 710068, Shanxi, China","Xi'an Aeronautics Computing Technique Research Institute, AVIC, No. 156, TaiBai Nroth Road, Xi'an, 710068, Shanxi, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aviation Key Laboratory of Science and Technology on Airborne and Missleborne Computer, Xi\u2019an, 710065, Shanxi, China","institution_ids":["https://openalex.org/I4210147538"]},{"raw_affiliation_string":"Xi\u2019an Aeronautics Computing Technique Research Institute, AVIC, No. 156, TaiBai Nroth Road, Xi\u2019an, 710068, Shanxi, China","institution_ids":["https://openalex.org/I4210133467"]},{"raw_affiliation_string":"Xi'an Aeronautics Computing Technique Research Institute, AVIC, No. 156, TaiBai Nroth Road, Xi'an, 710068, Shanxi, China","institution_ids":["https://openalex.org/I4210133467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100395816","display_name":"Junjie Wang","orcid":"https://orcid.org/0000-0003-0732-051X"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junjie Wang","raw_affiliation_strings":["Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","Institute of Medical Informatics and Management, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 210029, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"Institute of Medical Informatics and Management, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 210029, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5115602468","display_name":"Yun Liu","orcid":"https://orcid.org/0000-0003-4377-1211"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yun Liu","raw_affiliation_strings":["Department of Information, the First Affiliated Hospital, Nanjing Medical University, No. 300 Guang Zhou Road, Nanjing, 210029, Jiangsu, China","Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","Institute of Medical Informatics and Management, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 210029, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information, the First Affiliated Hospital, Nanjing Medical University, No. 300 Guang Zhou Road, Nanjing, 210029, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"Department of Medical Informatics, School of Biomedical Engineering and Informatics, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 211166, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"Institute of Medical Informatics and Management, Nanjing Medical University, 101 Longmian Avenue, Nanjing, 210029, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5101857711"],"corresponding_institution_ids":["https://openalex.org/I83519826"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":5.8228,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.96594679,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"16","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9621000289916992,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6815386414527893},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.6583256721496582},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5901194214820862},{"id":"https://openalex.org/keywords/fusion-mechanism","display_name":"Fusion mechanism","score":0.5810303092002869},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5263888835906982},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5228933691978455},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5163137316703796},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.5036527514457703},{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.45256996154785156},{"id":"https://openalex.org/keywords/feature-vector","display_name":"Feature vector","score":0.42105403542518616},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3676544427871704},{"id":"https://openalex.org/keywords/fusion","display_name":"Fusion","score":0.25909966230392456},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.14892393350601196},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12632310390472412},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12546026706695557},{"id":"https://openalex.org/keywords/lipid-bilayer-fusion","display_name":"Lipid bilayer fusion","score":0.098592609167099}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6815386414527893},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.6583256721496582},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5901194214820862},{"id":"https://openalex.org/C173414695","wikidata":"https://www.wikidata.org/wiki/Q5510276","display_name":"Fusion mechanism","level":4,"score":0.5810303092002869},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5263888835906982},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5228933691978455},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5163137316703796},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.5036527514457703},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.45256996154785156},{"id":"https://openalex.org/C83665646","wikidata":"https://www.wikidata.org/wiki/Q42139305","display_name":"Feature vector","level":2,"score":0.42105403542518616},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3676544427871704},{"id":"https://openalex.org/C158525013","wikidata":"https://www.wikidata.org/wiki/Q2593739","display_name":"Fusion","level":2,"score":0.25909966230392456},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.14892393350601196},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12632310390472412},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12546026706695557},{"id":"https://openalex.org/C103038307","wikidata":"https://www.wikidata.org/wiki/Q6556360","display_name":"Lipid bilayer fusion","level":3,"score":0.098592609167099},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/s13321-024-00839-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-024-00839-8","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-024-00839-8","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11017561","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11017561","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:365967004b924349be15a8172a02e34d","is_oa":false,"landing_page_url":"https://doaj.org/article/365967004b924349be15a8172a02e34d","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, Vol 16, Iss 1, Pp 1-14 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13321-024-00839-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-024-00839-8","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-024-00839-8","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.6899999976158142,"display_name":"Good health and well-being"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321605","display_name":"Government of Jiangsu Province","ror":"https://ror.org/004svx814"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4394812234.pdf"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W1964940342","https://openalex.org/W1970651561","https://openalex.org/W1975147762","https://openalex.org/W2016979469","https://openalex.org/W2024387518","https://openalex.org/W2060737851","https://openalex.org/W2061061337","https://openalex.org/W2100563036","https://openalex.org/W2108068107","https://openalex.org/W2118151336","https://openalex.org/W2145877930","https://openalex.org/W2200017991","https://openalex.org/W2299417213","https://openalex.org/W2335854816","https://openalex.org/W2461427403","https://openalex.org/W2471562228","https://openalex.org/W2472085920","https://openalex.org/W2531057506","https://openalex.org/W2540423520","https://openalex.org/W2608863179","https://openalex.org/W2609464715","https://openalex.org/W2775061087","https://openalex.org/W2790982990","https://openalex.org/W2793608852","https://openalex.org/W2899070097","https://openalex.org/W2911964244","https://openalex.org/W2949524414","https://openalex.org/W2998807596","https://openalex.org/W3035302862","https://openalex.org/W3092034553","https://openalex.org/W3102269903","https://openalex.org/W3107514561","https://openalex.org/W3113769443","https://openalex.org/W3118751600","https://openalex.org/W3164087725","https://openalex.org/W3175449989","https://openalex.org/W3191637674","https://openalex.org/W3203908308","https://openalex.org/W4206405364","https://openalex.org/W4226297238","https://openalex.org/W4226363321","https://openalex.org/W4242517144","https://openalex.org/W4293214728","https://openalex.org/W4297064879","https://openalex.org/W4312114349","https://openalex.org/W4323031630","https://openalex.org/W4378953498","https://openalex.org/W6604218873","https://openalex.org/W6828894009"],"related_works":["https://openalex.org/W2378211422","https://openalex.org/W2745001401","https://openalex.org/W4321353415","https://openalex.org/W2130974462","https://openalex.org/W2028665553","https://openalex.org/W2086519370","https://openalex.org/W972276598","https://openalex.org/W2951187577","https://openalex.org/W4313887926","https://openalex.org/W4313888283"],"abstract_inverted_index":{"Abstract":[0],"Motivation":[1],"Drug":[2],"combination":[3],"therapies":[4],"have":[5,47],"shown":[6],"promise":[7],"in":[8,50,241],"clinical":[9],"cancer":[10],"treatments.":[11],"However,":[12],"it":[13],"is":[14,153,165],"hard":[15],"to":[16,30,113],"experimentally":[17],"identify":[18],"all":[19],"drug":[20,44,56,115,162,184,194,207],"combinations":[21],"for":[22,43,90,159,182],"synergistic":[23,161],"interaction":[24,73],"even":[25],"with":[26],"high-throughput":[27],"screening":[28],"due":[29],"the":[31,71,132,201,206,219,237],"vast":[32],"space":[33],"of":[34,40,100,215,221,236,239],"potential":[35],"combinations.":[36,163],"Although":[37],"a":[38,85,109,177],"number":[39],"computational":[41],"methods":[42],"synergy":[45,185],"prediction":[46],"proven":[48],"successful":[49],"narrowing":[51],"down":[52],"this":[53,81,174],"space,":[54],"fusing":[55],"pairs":[57],"and":[58,76,102,107,116,156,196,208,226,231],"cell":[59,77,103,117,197,209,227],"line":[60,118,198,210],"features":[61,211],"effectively":[62],"still":[63],"lacks":[64],"study,":[65],"hindering":[66],"current":[67],"algorithms":[68],"from":[69,192],"understanding":[70],"complex":[72,222],"between":[74,224],"drugs":[75,101,225],"lines.":[78,228],"Results":[79],"In":[80,120],"paper,":[82],"we":[83],"proposed":[84],"Permutable":[86],"feature":[87,179],"fusion":[88,111,180,203],"network":[89,181],"Drug-Drug":[91],"Synergy":[92],"prediction,":[93],"named":[94],"PermuteDDS.":[95],"PermuteDDS":[96,122,144,152,240],"takes":[97],"multiple":[98,193],"representations":[99,195],"lines":[104],"as":[105],"input":[106],"employs":[108],"permutable":[110,178,202],"mechanism":[112,204],"combine":[114,205],"features.":[119],"experiments,":[121],"exhibits":[123],"state-of-the-art":[124],"performance":[125],"on":[126,134],"two":[127],"benchmark":[128],"data":[129],"sets.":[130],"Additionally,":[131],"results":[133],"independent":[135],"test":[136],"set":[137],"grouped":[138],"by":[139,212],"different":[140,216],"tissues":[141],"reveal":[142],"that":[143,151],"has":[145],"good":[146],"generalization":[147],"performance.":[148],"We":[149],"believed":[150],"an":[154],"effective":[155],"valuable":[157],"tool":[158],"identifying":[160],"It":[164],"publicly":[166],"available":[167],"at":[168],"https://github.com/littlewei-lazy/PermuteDDS":[169],".":[170],"Scientific":[171],"contribution":[172],"First,":[173],"paper":[175],"proposes":[176],"predicting":[183,242],"termed":[186],"PermuteDDS,":[187],"which":[188],"extract":[189],"diverse":[190],"information":[191,214],"representations.":[199],"Second,":[200],"integrating":[213],"channels,":[217],"enabling":[218],"utilization":[220],"relationships":[223],"Third,":[229],"comparative":[230],"ablation":[232],"experiments":[233],"provide":[234],"evidence":[235],"efficacy":[238],"drug-drug":[243],"synergy.":[244]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":3}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
