{"id":"https://openalex.org/W4392015344","doi":"https://doi.org/10.1186/s13321-024-00812-5","title":"Reinvent 4: Modern AI\u2013driven generative molecule design","display_name":"Reinvent 4: Modern AI\u2013driven generative molecule design","publication_year":2024,"publication_date":"2024-02-21","ids":{"openalex":"https://openalex.org/W4392015344","doi":"https://doi.org/10.1186/s13321-024-00812-5","pmid":"https://pubmed.ncbi.nlm.nih.gov/38383444"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-024-00812-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-024-00812-5","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13321-024-00812-5.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1186/s13321-024-00812-5.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024497714","display_name":"Hannes H. Loeffler","orcid":"https://orcid.org/0000-0001-9458-3945"},"institutions":[{"id":"https://openalex.org/I4210128490","display_name":"AstraZeneca (Japan)","ror":"https://ror.org/047k23798","country_code":"JP","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210128490"]},{"id":"https://openalex.org/I4210137263","display_name":"AstraZeneca (Finland)","ror":"https://ror.org/035n56j11","country_code":"FI","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210137263"]},{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["FI","JP","SE"],"is_corresponding":true,"raw_author_name":"Hannes H. Loeffler","raw_affiliation_strings":["Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden. hannes.loffler@astrazeneca.com"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden. hannes.loffler@astrazeneca.com","institution_ids":["https://openalex.org/I4210143795","https://openalex.org/I4210137263","https://openalex.org/I4210128490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089237271","display_name":"Jiazhen He","orcid":"https://orcid.org/0000-0001-5848-8318"},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Jiazhen He","raw_affiliation_strings":["Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013544797","display_name":"Alessandro Tibo","orcid":"https://orcid.org/0000-0002-9070-740X"},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Alessandro Tibo","raw_affiliation_strings":["Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030485362","display_name":"Jon Paul Janet","orcid":"https://orcid.org/0000-0001-7825-4797"},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Jon Paul Janet","raw_affiliation_strings":["Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055735688","display_name":"Alexey Voronov","orcid":"https://orcid.org/0000-0003-0709-4954"},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Alexey Voronov","raw_affiliation_strings":["Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088554828","display_name":"Lewis Mervin","orcid":"https://orcid.org/0000-0002-7271-0824"},"institutions":[{"id":"https://openalex.org/I105036370","display_name":"AstraZeneca (United Kingdom)","ror":"https://ror.org/04r9x1a08","country_code":"GB","type":"company","lineage":["https://openalex.org/I105036370"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lewis H. Mervin","raw_affiliation_strings":["Molecular AI, Discovery Sciences, R&D, AstraZeneca, Cambridge, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular AI, Discovery Sciences, R&D, AstraZeneca, Cambridge, UK","institution_ids":["https://openalex.org/I105036370"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076975589","display_name":"Ola Engkvist","orcid":"https://orcid.org/0000-0003-4970-6461"},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Ola Engkvist","raw_affiliation_strings":["Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular AI, Discovery Sciences, R&D, AstraZeneca, Gothenburg, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5024497714"],"corresponding_institution_ids":["https://openalex.org/I4210128490","https://openalex.org/I4210137263","https://openalex.org/I4210143795"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":75.2291,"has_fulltext":true,"cited_by_count":253,"citation_normalized_percentile":{"value":0.99973702,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"16","issue":"1","first_page":"20","last_page":"20"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7953276634216309},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.5190049409866333},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.48930713534355164},{"id":"https://openalex.org/keywords/generative-grammar","display_name":"Generative grammar","score":0.4721536636352539},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.46297261118888855},{"id":"https://openalex.org/keywords/software-design","display_name":"Software design","score":0.44235843420028687},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.44177788496017456},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.334779292345047},{"id":"https://openalex.org/keywords/software-development","display_name":"Software development","score":0.2713395357131958}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7953276634216309},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.5190049409866333},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.48930713534355164},{"id":"https://openalex.org/C39890363","wikidata":"https://www.wikidata.org/wiki/Q36108","display_name":"Generative grammar","level":2,"score":0.4721536636352539},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.46297261118888855},{"id":"https://openalex.org/C52913732","wikidata":"https://www.wikidata.org/wiki/Q857102","display_name":"Software design","level":4,"score":0.44235843420028687},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.44177788496017456},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.334779292345047},{"id":"https://openalex.org/C529173508","wikidata":"https://www.wikidata.org/wiki/Q638608","display_name":"Software development","level":3,"score":0.2713395357131958}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13321-024-00812-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-024-00812-5","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13321-024-00812-5.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:38383444","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38383444","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10882833","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10882833","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10882833/pdf/13321_2024_Article_812.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:0bb4fcc6450445e78460e6559e9fdbfc","is_oa":false,"landing_page_url":"https://doaj.org/article/0bb4fcc6450445e78460e6559e9fdbfc","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, Vol 16, Iss 1, Pp 1-16 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13321-024-00812-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-024-00812-5","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13321-024-00812-5.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6299999952316284,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4392015344.pdf","grobid_xml":"https://content.openalex.org/works/W4392015344.grobid-xml"},"referenced_works_count":79,"referenced_works":["https://openalex.org/W41554520","https://openalex.org/W1978550148","https://openalex.org/W1986357594","https://openalex.org/W1991133427","https://openalex.org/W2016589492","https://openalex.org/W2027065525","https://openalex.org/W2034549041","https://openalex.org/W2044444984","https://openalex.org/W2050456292","https://openalex.org/W2051060071","https://openalex.org/W2060531713","https://openalex.org/W2102377211","https://openalex.org/W2134967712","https://openalex.org/W2135732933","https://openalex.org/W2160592148","https://openalex.org/W2529996553","https://openalex.org/W2610148085","https://openalex.org/W2765224015","https://openalex.org/W2773987374","https://openalex.org/W2784270883","https://openalex.org/W2803615944","https://openalex.org/W2900090807","https://openalex.org/W2900694120","https://openalex.org/W2925830236","https://openalex.org/W2953128081","https://openalex.org/W2971690404","https://openalex.org/W2989615256","https://openalex.org/W2992586577","https://openalex.org/W3001807933","https://openalex.org/W3007309629","https://openalex.org/W3094686696","https://openalex.org/W3098269892","https://openalex.org/W3099414221","https://openalex.org/W3100358278","https://openalex.org/W3100751385","https://openalex.org/W3103098434","https://openalex.org/W3112890400","https://openalex.org/W3116865743","https://openalex.org/W3127347132","https://openalex.org/W3165171933","https://openalex.org/W3168436232","https://openalex.org/W3185391990","https://openalex.org/W3198869316","https://openalex.org/W3209951148","https://openalex.org/W3212543990","https://openalex.org/W4214567217","https://openalex.org/W4220798957","https://openalex.org/W4220802400","https://openalex.org/W4229016081","https://openalex.org/W4283270512","https://openalex.org/W4283750135","https://openalex.org/W4294955967","https://openalex.org/W4302362632","https://openalex.org/W4306754767","https://openalex.org/W4307447012","https://openalex.org/W4307468223","https://openalex.org/W4313485929","https://openalex.org/W4318912574","https://openalex.org/W4319164354","https://openalex.org/W4319869596","https://openalex.org/W4319986489","https://openalex.org/W4321377212","https://openalex.org/W4322492914","https://openalex.org/W4362589790","https://openalex.org/W4365442601","https://openalex.org/W4377023339","https://openalex.org/W4378071155","https://openalex.org/W4378188762","https://openalex.org/W4379208750","https://openalex.org/W4379520927","https://openalex.org/W4384389969","https://openalex.org/W4384925227","https://openalex.org/W4385898386","https://openalex.org/W4386400622","https://openalex.org/W4387472361","https://openalex.org/W4388265932","https://openalex.org/W4391660409","https://openalex.org/W4393154902","https://openalex.org/W4401864577"],"related_works":["https://openalex.org/W2618286804","https://openalex.org/W2329643025","https://openalex.org/W2002770077","https://openalex.org/W3131163342","https://openalex.org/W2092256833","https://openalex.org/W2142369114","https://openalex.org/W2361728394","https://openalex.org/W2419141552","https://openalex.org/W326799471","https://openalex.org/W2117592158"],"abstract_inverted_index":{"REINVENT":[0,47,86],"4":[1,48,87],"is":[2,88,109,132,149,177],"a":[3,89,95,135],"modern":[4],"open-source":[5,167],"generative":[6,171],"AI":[7,122,143,209],"framework":[8,136],"for":[9,114,137,170],"the":[10,34,72,117,130,156,175,192],"design":[11,173],"of":[12,71,106,116,191,208],"small":[13],"molecules.":[14],"The":[15,104,147,163,189],"software":[16,73,148,164,176],"utilizes":[17],"recurrent":[18],"neural":[19],"networks":[20],"and":[21,44,50,63,74,79,139,153,201,210,214],"transformer":[22],"architectures":[23],"to":[24,110,133,183],"drive":[25],"molecule":[26,64,124],"generation.":[27,125],"These":[28],"generators":[29],"are":[30,82],"seamlessly":[31],"embedded":[32],"within":[33],"general":[35],"machine":[36,195],"learning":[37,43,196],"optimization":[38],"algorithms,":[39],"transfer":[40],"learning,":[41],"reinforcement":[42],"curriculum":[45],"learning.":[46],"enables":[49],"facilitates":[51],"de":[52],"novo":[53],"design,":[54,58,60],"R-group":[55],"replacement,":[56],"library":[57],"linker":[59],"scaffold":[61],"hopping":[62],"optimization.":[65],"This":[66],"contribution":[67],"gives":[68],"an":[69,166],"overview":[70],"describes":[75],"its":[76],"design.":[77,146],"Algorithms":[78],"their":[80],"applications":[81],"discussed":[83],"in":[84,98,121,142,181,198],"detail.":[85],"command":[90],"line":[91],"tool":[92],"which":[93],"reads":[94],"user":[96],"configuration":[97],"either":[99],"TOML":[100],"or":[101],"JSON":[102],"format.":[103],"aim":[105],"this":[107],"release":[108,131],"provide":[111],"reference":[112,168],"implementations":[113],"some":[115],"most":[118,193],"common":[119,194],"algorithms":[120,197],"based":[123,144],"An":[126],"additional":[127],"goal":[128],"with":[129],"create":[134],"education":[138],"future":[140],"innovation":[141],"molecular":[145,172],"available":[150],"from":[151],"https://github.com/MolecularAI/REINVENT4":[152],"released":[154],"under":[155],"permissive":[157],"Apache":[158],"2.0":[159],"license.":[160],"Scientific":[161],"contribution.":[162],"provides":[165],"implementation":[169],"where":[174],"also":[178],"being":[179],"used":[180],"production":[182],"support":[184],"in-house":[185],"drug":[186],"discovery":[187],"projects.":[188],"publication":[190],"one":[199],"code":[200],"full":[202],"documentation":[203],"thereof":[204],"will":[205],"increase":[206],"transparency":[207],"foster":[211],"innovation,":[212],"collaboration":[213],"education.":[215]},"counts_by_year":[{"year":2026,"cited_by_count":93},{"year":2025,"cited_by_count":124},{"year":2024,"cited_by_count":36}],"updated_date":"2026-07-01T08:55:40.977307","created_date":"2025-10-10T00:00:00"}
