{"id":"https://openalex.org/W4365150495","doi":"https://doi.org/10.1186/s13321-022-00669-6","title":"Principles and requirements for nanomaterial representations to facilitate machine processing and cooperation with nanoinformatics tools","display_name":"Principles and requirements for nanomaterial representations to facilitate machine processing and cooperation with nanoinformatics tools","publication_year":2023,"publication_date":"2023-04-12","ids":{"openalex":"https://openalex.org/W4365150495","doi":"https://doi.org/10.1186/s13321-022-00669-6","pmid":"https://pubmed.ncbi.nlm.nih.gov/37046286"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-022-00669-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-022-00669-6","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-022-00669-6","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-022-00669-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078846650","display_name":"Kostas Blekos","orcid":"https://orcid.org/0000-0002-6777-2107"},"institutions":[{"id":"https://openalex.org/I203474044","display_name":"National Centre of Scientific Research \"Demokritos\"","ror":"https://ror.org/038jp4m40","country_code":"GR","type":"facility","lineage":["https://openalex.org/I203474044"]},{"id":"https://openalex.org/I4387155365","display_name":"Institute of Nuclear & Radiological Sciences and Technology, Energy & Safety","ror":"https://ror.org/00tq5n859","country_code":null,"type":"facility","lineage":["https://openalex.org/I203474044","https://openalex.org/I4387155365"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Kostas Blekos","raw_affiliation_strings":["Institute of Nuclear and Radiological Sciences and Technology, Energy and Safety, National Centre for Scientific Research \"Demokritos\", 15341, Agia Paraskevi, Greece"],"affiliations":[{"raw_affiliation_string":"Institute of Nuclear and Radiological Sciences and Technology, Energy and Safety, National Centre for Scientific Research \"Demokritos\", 15341, Agia Paraskevi, Greece","institution_ids":["https://openalex.org/I203474044","https://openalex.org/I4387155365"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071971385","display_name":"Kostas Chairetakis","orcid":null},"institutions":[{"id":"https://openalex.org/I203474044","display_name":"National Centre of Scientific Research \"Demokritos\"","ror":"https://ror.org/038jp4m40","country_code":"GR","type":"facility","lineage":["https://openalex.org/I203474044"]},{"id":"https://openalex.org/I4387155365","display_name":"Institute of Nuclear & Radiological Sciences and Technology, Energy & Safety","ror":"https://ror.org/00tq5n859","country_code":null,"type":"facility","lineage":["https://openalex.org/I203474044","https://openalex.org/I4387155365"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Kostas Chairetakis","raw_affiliation_strings":["Institute of Nuclear and Radiological Sciences and Technology, Energy and Safety, National Centre for Scientific Research \"Demokritos\", 15341, Agia Paraskevi, Greece"],"affiliations":[{"raw_affiliation_string":"Institute of Nuclear and Radiological Sciences and Technology, Energy and Safety, National Centre for Scientific Research \"Demokritos\", 15341, Agia Paraskevi, Greece","institution_ids":["https://openalex.org/I203474044","https://openalex.org/I4387155365"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085054719","display_name":"Iseult Lynch","orcid":"https://orcid.org/0000-0003-4250-4584"},"institutions":[{"id":"https://openalex.org/I79619799","display_name":"University of Birmingham","ror":"https://ror.org/03angcq70","country_code":"GB","type":"education","lineage":["https://openalex.org/I79619799"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Iseult Lynch","raw_affiliation_strings":["School of Geography, Earth and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK"],"affiliations":[{"raw_affiliation_string":"School of Geography, Earth and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK","institution_ids":["https://openalex.org/I79619799"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022701519","display_name":"Effie Marcoulaki","orcid":"https://orcid.org/0000-0003-1113-6635"},"institutions":[{"id":"https://openalex.org/I4387155365","display_name":"Institute of Nuclear & Radiological Sciences and Technology, Energy & Safety","ror":"https://ror.org/00tq5n859","country_code":null,"type":"facility","lineage":["https://openalex.org/I203474044","https://openalex.org/I4387155365"]},{"id":"https://openalex.org/I203474044","display_name":"National Centre of Scientific Research \"Demokritos\"","ror":"https://ror.org/038jp4m40","country_code":"GR","type":"facility","lineage":["https://openalex.org/I203474044"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Effie Marcoulaki","raw_affiliation_strings":["Institute of Nuclear and Radiological Sciences and Technology, Energy and Safety, National Centre for Scientific Research \"Demokritos\", 15341, Agia Paraskevi, Greece. emarcoulaki@ipta.demokritos.gr","Institute of Nuclear and Radiological Sciences and Technology, Energy and Safety, National Centre for Scientific Research \"Demokritos\", 15341, Agia Paraskevi, Greece"],"affiliations":[{"raw_affiliation_string":"Institute of Nuclear and Radiological Sciences and Technology, Energy and Safety, National Centre for Scientific Research \"Demokritos\", 15341, Agia Paraskevi, Greece. emarcoulaki@ipta.demokritos.gr","institution_ids":[]},{"raw_affiliation_string":"Institute of Nuclear and Radiological Sciences and Technology, Energy and Safety, National Centre for Scientific Research \"Demokritos\", 15341, Agia Paraskevi, Greece","institution_ids":["https://openalex.org/I203474044","https://openalex.org/I4387155365"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5078846650"],"corresponding_institution_ids":["https://openalex.org/I203474044","https://openalex.org/I4387155365"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":1.173,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.74950777,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"15","issue":"1","first_page":"44","last_page":"44"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9236999750137329,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7984941601753235},{"id":"https://openalex.org/keywords/encode","display_name":"ENCODE","score":0.6692957878112793},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6681574583053589},{"id":"https://openalex.org/keywords/reuse","display_name":"Reuse","score":0.6608538627624512},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.606370747089386},{"id":"https://openalex.org/keywords/scope","display_name":"Scope (computer science)","score":0.5391223430633545},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5253642797470093},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.47541362047195435},{"id":"https://openalex.org/keywords/chemical-nomenclature","display_name":"Chemical nomenclature","score":0.4428706169128418},{"id":"https://openalex.org/keywords/encoding","display_name":"Encoding (memory)","score":0.4324900507926941},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3677774965763092},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34813833236694336},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3219996392726898},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.12820225954055786},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.09416919946670532}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7984941601753235},{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.6692957878112793},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6681574583053589},{"id":"https://openalex.org/C206588197","wikidata":"https://www.wikidata.org/wiki/Q846574","display_name":"Reuse","level":2,"score":0.6608538627624512},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.606370747089386},{"id":"https://openalex.org/C2778012447","wikidata":"https://www.wikidata.org/wiki/Q1034415","display_name":"Scope (computer science)","level":2,"score":0.5391223430633545},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5253642797470093},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.47541362047195435},{"id":"https://openalex.org/C125832229","wikidata":"https://www.wikidata.org/wiki/Q6503924","display_name":"Chemical nomenclature","level":2,"score":0.4428706169128418},{"id":"https://openalex.org/C125411270","wikidata":"https://www.wikidata.org/wiki/Q18653","display_name":"Encoding (memory)","level":2,"score":0.4324900507926941},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3677774965763092},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34813833236694336},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3219996392726898},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.12820225954055786},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.09416919946670532},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/s13321-022-00669-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-022-00669-6","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-022-00669-6","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:37046286","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37046286","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10099932","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10099932","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10099932/pdf/13321_2022_Article_669.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/27a3e9cd-35df-408f-866c-2e61ab644476","is_oa":true,"landing_page_url":"https://research.birmingham.ac.uk/en/publications/27a3e9cd-35df-408f-866c-2e61ab644476","pdf_url":"https://pure-oai.bham.ac.uk/ws/files/191208182/s13321_022_00669_6.pdf","source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Blekos , K , Chairetakis , K , Lynch , I & Marcoulaki , E 2023 , ' Principles and requirements for nanomaterial representations to facilitate machine processing and cooperation with nanoinformatics tools ' , Journal of Cheminformatics , vol. 15 , no. 1 , 44 . https://doi.org/10.1186/s13321-022-00669-6","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:83043afd64184e0da170c48f9afbafc5","is_oa":true,"landing_page_url":"https://doaj.org/article/83043afd64184e0da170c48f9afbafc5","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, Vol 15, Iss 1, Pp 1-17 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13321-022-00669-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-022-00669-6","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-022-00669-6","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.5199999809265137}],"awards":[{"id":"https://openalex.org/G3527855270","display_name":null,"funder_award_id":"731032","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G413401100","display_name":null,"funder_award_id":"814426","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4365150495.pdf"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W975671844","https://openalex.org/W1757990252","https://openalex.org/W1987560950","https://openalex.org/W1993497567","https://openalex.org/W2013454197","https://openalex.org/W2038702914","https://openalex.org/W2049654081","https://openalex.org/W2067836881","https://openalex.org/W2080635178","https://openalex.org/W2087563523","https://openalex.org/W2096525273","https://openalex.org/W2096541451","https://openalex.org/W2150829627","https://openalex.org/W2194062295","https://openalex.org/W2302501749","https://openalex.org/W2529996553","https://openalex.org/W2610148085","https://openalex.org/W2618625858","https://openalex.org/W2742835787","https://openalex.org/W2752180799","https://openalex.org/W2793143650","https://openalex.org/W2800404930","https://openalex.org/W2809776129","https://openalex.org/W2901476322","https://openalex.org/W2945551948","https://openalex.org/W2947625459","https://openalex.org/W2976720228","https://openalex.org/W2976817883","https://openalex.org/W2999347613","https://openalex.org/W3010108950","https://openalex.org/W3010854401","https://openalex.org/W3015334569","https://openalex.org/W3048540906","https://openalex.org/W3093594696","https://openalex.org/W3098269892","https://openalex.org/W3112554161","https://openalex.org/W3125607360","https://openalex.org/W3139720451","https://openalex.org/W3171058347","https://openalex.org/W3182351133","https://openalex.org/W4243601081"],"related_works":["https://openalex.org/W4256227915","https://openalex.org/W2372020181","https://openalex.org/W2156531654","https://openalex.org/W1581723585","https://openalex.org/W4378714697","https://openalex.org/W2294330161","https://openalex.org/W2940472653","https://openalex.org/W2253069048","https://openalex.org/W2804553224","https://openalex.org/W140709781"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":2}],"updated_date":"2026-03-01T08:55:55.761014","created_date":"2025-10-10T00:00:00"}
