{"id":"https://openalex.org/W3191452947","doi":"https://doi.org/10.1186/s13321-021-00540-0","title":"GraphDTI: A robust deep learning predictor of drug-target interactions from multiple heterogeneous data","display_name":"GraphDTI: A robust deep learning predictor of drug-target interactions from multiple heterogeneous data","publication_year":2021,"publication_date":"2021-08-11","ids":{"openalex":"https://openalex.org/W3191452947","doi":"https://doi.org/10.1186/s13321-021-00540-0","mag":"3191452947","pmid":"https://pubmed.ncbi.nlm.nih.gov/34380569"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-021-00540-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-021-00540-0","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-021-00540-0","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-021-00540-0","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100607490","display_name":"Guannan Liu","orcid":"https://orcid.org/0000-0002-4532-7109"},"institutions":[{"id":"https://openalex.org/I121820613","display_name":"Louisiana State University","ror":"https://ror.org/05ect4e57","country_code":"US","type":"education","lineage":["https://openalex.org/I121820613"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guannan Liu","raw_affiliation_strings":["Division of Electrical and Computer Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Electrical and Computer Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA","institution_ids":["https://openalex.org/I121820613"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017574364","display_name":"Manali Singha","orcid":"https://orcid.org/0000-0002-8049-9643"},"institutions":[{"id":"https://openalex.org/I121820613","display_name":"Louisiana State University","ror":"https://ror.org/05ect4e57","country_code":"US","type":"education","lineage":["https://openalex.org/I121820613"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Manali Singha","raw_affiliation_strings":["Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, 70803, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, 70803, USA","institution_ids":["https://openalex.org/I121820613"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108268424","display_name":"Limeng Pu","orcid":"https://orcid.org/0009-0002-1744-9325"},"institutions":[{"id":"https://openalex.org/I121820613","display_name":"Louisiana State University","ror":"https://ror.org/05ect4e57","country_code":"US","type":"education","lineage":["https://openalex.org/I121820613"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Limeng Pu","raw_affiliation_strings":["Center for Computation and Technology, Louisiana State University, Baton Rouge, LA, 70803, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Computation and Technology, Louisiana State University, Baton Rouge, LA, 70803, USA","institution_ids":["https://openalex.org/I121820613"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075673732","display_name":"Prasanga Neupane","orcid":null},"institutions":[{"id":"https://openalex.org/I121820613","display_name":"Louisiana State University","ror":"https://ror.org/05ect4e57","country_code":"US","type":"education","lineage":["https://openalex.org/I121820613"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Prasanga Neupane","raw_affiliation_strings":["Division of Electrical and Computer Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Electrical and Computer Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA","institution_ids":["https://openalex.org/I121820613"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059268799","display_name":"Joseph Feinstein","orcid":null},"institutions":[{"id":"https://openalex.org/I27804330","display_name":"Brown University","ror":"https://ror.org/05gq02987","country_code":"US","type":"education","lineage":["https://openalex.org/I27804330"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph Feinstein","raw_affiliation_strings":["Department of Computer Science, Brown University, Providence, RI, 02902, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Brown University, Providence, RI, 02902, USA","institution_ids":["https://openalex.org/I27804330"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040614086","display_name":"Hsiao\u2010Chun Wu","orcid":"https://orcid.org/0000-0002-0178-1246"},"institutions":[{"id":"https://openalex.org/I121820613","display_name":"Louisiana State University","ror":"https://ror.org/05ect4e57","country_code":"US","type":"education","lineage":["https://openalex.org/I121820613"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hsiao-Chun Wu","raw_affiliation_strings":["Division of Electrical and Computer Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Electrical and Computer Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA","institution_ids":["https://openalex.org/I121820613"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057117526","display_name":"J. Ramanujam","orcid":"https://orcid.org/0000-0002-4349-1327"},"institutions":[{"id":"https://openalex.org/I121820613","display_name":"Louisiana State University","ror":"https://ror.org/05ect4e57","country_code":"US","type":"education","lineage":["https://openalex.org/I121820613"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Ramanujam","raw_affiliation_strings":["Center for Computation and Technology, Louisiana State University, Baton Rouge, LA, 70803, USA","Division of Electrical and Computer Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Computation and Technology, Louisiana State University, Baton Rouge, LA, 70803, USA","institution_ids":["https://openalex.org/I121820613"]},{"raw_affiliation_string":"Division of Electrical and Computer Engineering, Louisiana State University, Baton Rouge, LA, 70803, USA","institution_ids":["https://openalex.org/I121820613"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033579800","display_name":"Micha\u0142 Bryli\u0144ski","orcid":"https://orcid.org/0000-0002-6204-2869"},"institutions":[{"id":"https://openalex.org/I121820613","display_name":"Louisiana State University","ror":"https://ror.org/05ect4e57","country_code":"US","type":"education","lineage":["https://openalex.org/I121820613"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Michal Brylinski","raw_affiliation_strings":["Center for Computation and Technology, Louisiana State University, Baton Rouge, LA, 70803, USA. michal@brylinski.org","Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, 70803, USA. michal@brylinski.org","Center for Computation and Technology, Louisiana State University, Baton Rouge, LA, 70803, USA"],"raw_orcid":"https://orcid.org/0000-0002-6204-2869","affiliations":[{"raw_affiliation_string":"Center for Computation and Technology, Louisiana State University, Baton Rouge, LA, 70803, USA. michal@brylinski.org","institution_ids":["https://openalex.org/I121820613"]},{"raw_affiliation_string":"Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, 70803, USA. michal@brylinski.org","institution_ids":["https://openalex.org/I121820613"]},{"raw_affiliation_string":"Center for Computation and Technology, Louisiana State University, Baton Rouge, LA, 70803, USA","institution_ids":["https://openalex.org/I121820613"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5033579800"],"corresponding_institution_ids":["https://openalex.org/I121820613"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":3.0451,"has_fulltext":true,"cited_by_count":26,"citation_normalized_percentile":{"value":0.92315219,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"13","issue":"1","first_page":"58","last_page":"58"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9724000096321106,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7173198461532593},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5423075556755066},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5121097564697266},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.4939118027687073},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.45713484287261963},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.45682293176651},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4554668068885803},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4322187900543213},{"id":"https://openalex.org/keywords/drug-target","display_name":"Drug target","score":0.41696494817733765},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37191981077194214},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2928784489631653},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.14340618252754211},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14047771692276},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.13752487301826477}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7173198461532593},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5423075556755066},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5121097564697266},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.4939118027687073},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.45713484287261963},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.45682293176651},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4554668068885803},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4322187900543213},{"id":"https://openalex.org/C2989108626","wikidata":"https://www.wikidata.org/wiki/Q904407","display_name":"Drug target","level":2,"score":0.41696494817733765},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37191981077194214},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2928784489631653},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.14340618252754211},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14047771692276},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.13752487301826477},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":8,"locations":[{"id":"doi:10.1186/s13321-021-00540-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-021-00540-0","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-021-00540-0","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:34380569","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34380569","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:digitalcommons.lsu.edu:biosci_pubs-4534","is_oa":true,"landing_page_url":"https://digitalcommons.lsu.edu/biosci_pubs/3529","pdf_url":null,"source":{"id":"https://openalex.org/S4210169993","display_name":"Civil War Book Review","issn_l":"1528-6592","issn":["1528-6592"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310315936","host_organization_name":"Louisiana State University","host_organization_lineage":["https://openalex.org/P4310315936"],"host_organization_lineage_names":["Louisiana State University"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Publications","raw_type":"text"},{"id":"pmh:oai:digitalcommons.lsu.edu:eecs_pubs-2444","is_oa":true,"landing_page_url":"https://digitalcommons.lsu.edu/eecs_pubs/1442","pdf_url":null,"source":{"id":"https://openalex.org/S4210169993","display_name":"Civil War Book Review","issn_l":"1528-6592","issn":["1528-6592"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310315936","host_organization_name":"Louisiana State University","host_organization_lineage":["https://openalex.org/P4310315936"],"host_organization_lineage_names":["Louisiana State University"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Publications","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:906e531a92ba466c941ac8f1556e93ee","is_oa":false,"landing_page_url":"https://doaj.org/article/906e531a92ba466c941ac8f1556e93ee","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, Vol 13, Iss 1, Pp 1-17 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8356453","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8356453","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"},{"id":"pmh:oai:repository.lsu.edu:biosci_pubs-4534","is_oa":true,"landing_page_url":"https://repository.lsu.edu/biosci_pubs/3529","pdf_url":null,"source":{"id":"https://openalex.org/S4210169993","display_name":"Civil War Book Review","issn_l":"1528-6592","issn":["1528-6592"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310315936","host_organization_name":"Louisiana State University","host_organization_lineage":["https://openalex.org/P4310315936"],"host_organization_lineage_names":["Louisiana State University"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Publications","raw_type":"text"},{"id":"pmh:oai:repository.lsu.edu:eecs_pubs-2444","is_oa":true,"landing_page_url":"https://repository.lsu.edu/eecs_pubs/1442","pdf_url":null,"source":{"id":"https://openalex.org/S4210169993","display_name":"Civil War Book Review","issn_l":"1528-6592","issn":["1528-6592"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310315936","host_organization_name":"Louisiana State University","host_organization_lineage":["https://openalex.org/P4310315936"],"host_organization_lineage_names":["Louisiana State University"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Publications","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1186/s13321-021-00540-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-021-00540-0","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-021-00540-0","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3057814403","display_name":null,"funder_award_id":"CCF1619303","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G4181709541","display_name":null,"funder_award_id":"R35GM119524","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G5086366002","display_name":null,"funder_award_id":"LEQSF(2016-19)-RD-B03","funder_id":"https://openalex.org/F4320309392","funder_display_name":"Louisiana Board of Regents"},{"id":"https://openalex.org/G5490367575","display_name":null,"funder_award_id":"R35GM119524","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7409109460","display_name":null,"funder_award_id":"CCF1619303","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8213745207","display_name":null,"funder_award_id":"GM119524","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G8328252270","display_name":null,"funder_award_id":"R35GM119524","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320309392","display_name":"Louisiana Board of Regents","ror":"https://ror.org/00jv89z46"},{"id":"https://openalex.org/F4320310395","display_name":"Louisiana State University","ror":"https://ror.org/05ect4e57"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3191452947.pdf","grobid_xml":"https://content.openalex.org/works/W3191452947.grobid-xml"},"referenced_works_count":111,"referenced_works":["https://openalex.org/W106423009","https://openalex.org/W114517082","https://openalex.org/W140467858","https://openalex.org/W1484799669","https://openalex.org/W1501531009","https://openalex.org/W1503398984","https://openalex.org/W1523518292","https://openalex.org/W1554944419","https://openalex.org/W1556190571","https://openalex.org/W1606947757","https://openalex.org/W1665214252","https://openalex.org/W1922001227","https://openalex.org/W1930021478","https://openalex.org/W1956617330","https://openalex.org/W1974266408","https://openalex.org/W1976470813","https://openalex.org/W1982309045","https://openalex.org/W1987971958","https://openalex.org/W1993554808","https://openalex.org/W1998222399","https://openalex.org/W2001648919","https://openalex.org/W2028849618","https://openalex.org/W2055147198","https://openalex.org/W2055577518","https://openalex.org/W2066264051","https://openalex.org/W2070050178","https://openalex.org/W2074231493","https://openalex.org/W2083589318","https://openalex.org/W2083620785","https://openalex.org/W2085917651","https://openalex.org/W2091950883","https://openalex.org/W2096864392","https://openalex.org/W2103017472","https://openalex.org/W2106029302","https://openalex.org/W2111251212","https://openalex.org/W2113371987","https://openalex.org/W2114367267","https://openalex.org/W2118023920","https://openalex.org/W2126626732","https://openalex.org/W2130479394","https://openalex.org/W2133776184","https://openalex.org/W2134967712","https://openalex.org/W2135255500","https://openalex.org/W2138517257","https://openalex.org/W2147405665","https://openalex.org/W2156876426","https://openalex.org/W2161151688","https://openalex.org/W2169678694","https://openalex.org/W2171482501","https://openalex.org/W2177411254","https://openalex.org/W2187089797","https://openalex.org/W2201274802","https://openalex.org/W2256119113","https://openalex.org/W2282206574","https://openalex.org/W2295124130","https://openalex.org/W2409331195","https://openalex.org/W2410743230","https://openalex.org/W2413605903","https://openalex.org/W2416672087","https://openalex.org/W2502949459","https://openalex.org/W2503792825","https://openalex.org/W2505665596","https://openalex.org/W2557283755","https://openalex.org/W2563206593","https://openalex.org/W2591212789","https://openalex.org/W2592742128","https://openalex.org/W2612467560","https://openalex.org/W2612835976","https://openalex.org/W2623060321","https://openalex.org/W2623587811","https://openalex.org/W2726548756","https://openalex.org/W2737925311","https://openalex.org/W2748251752","https://openalex.org/W2750547662","https://openalex.org/W2766844831","https://openalex.org/W2767891136","https://openalex.org/W2777416523","https://openalex.org/W2782083554","https://openalex.org/W2785947426","https://openalex.org/W2787894218","https://openalex.org/W2793534579","https://openalex.org/W2801348489","https://openalex.org/W2882976371","https://openalex.org/W2883371150","https://openalex.org/W2889321024","https://openalex.org/W2899788782","https://openalex.org/W2900090807","https://openalex.org/W2900569176","https://openalex.org/W2904742480","https://openalex.org/W2905261310","https://openalex.org/W2906424725","https://openalex.org/W2911964244","https://openalex.org/W2913422047","https://openalex.org/W2914877211","https://openalex.org/W2916534270","https://openalex.org/W2918544128","https://openalex.org/W2949547296","https://openalex.org/W2969476445","https://openalex.org/W2979567629","https://openalex.org/W2981883063","https://openalex.org/W2998462049","https://openalex.org/W3002697594","https://openalex.org/W3005960521","https://openalex.org/W3010821291","https://openalex.org/W3049166226","https://openalex.org/W4236463097","https://openalex.org/W4239761798","https://openalex.org/W6600120041","https://openalex.org/W6601767423","https://openalex.org/W6633728996","https://openalex.org/W6836751397"],"related_works":["https://openalex.org/W2553548503","https://openalex.org/W4390443207","https://openalex.org/W1967404732","https://openalex.org/W2226749982","https://openalex.org/W3045995536","https://openalex.org/W1968386238","https://openalex.org/W4308253407","https://openalex.org/W4310831746","https://openalex.org/W3206915023","https://openalex.org/W2119629574"],"abstract_inverted_index":{"Traditional":[0],"techniqueset":[1],"identification,":[2],"we":[3,40],"developed":[4],"GraphDTI,":[5,39],"a":[6,42,48,64,68,87],"robust":[7],"machine":[8],"learning":[9],"framework":[10],"integrating":[11],"the":[12,22,36,61,72,93,133,148,178,186],"molecular-level":[13],"information":[14,24,62],"on":[15,25,63,82,92],"drugs,":[16],"proteins,":[17],"and":[18,28,46,67,110,125,197],"binding":[19,84],"sites":[20],"with":[21,159],"system-level":[23,117],"gene":[26,112],"expression":[27,113],"protein-protein":[29,107],"interactions.":[30],"In":[31],"order":[32],"to":[33,53,102,156],"properly":[34],"evaluate":[35],"performance":[37],"of":[38,74,76,98,119,145,162,171,183,188],"compiled":[41],"high-quality":[43],"benchmarking":[44],"dataset":[45],"devised":[47],"new":[49],"cluster-based":[50],"cross-validation":[51],"p":[52],"identify":[54],"macromolecular":[55],"targets":[56],"for":[57],"drugs":[58,78],"utilize":[59],"solely":[60],"query":[65],"drug":[66,136,189],"putative":[69],"target.":[70],"Nonetheless,":[71],"mechanisms":[73],"action":[75],"many":[77],"depend":[79],"not":[80,140],"only":[81,141],"their":[83],"affinity":[85],"toward":[86],"single":[88],"protein,":[89],"but":[90,151],"also":[91,153],"signal":[94],"transduction":[95],"through":[96,194],"cascades":[97],"molecular":[99],"interactions":[100,174],"leading":[101],"certain":[103],"phenotypes.":[104],"Although":[105],"using":[106],"interaction":[108],"networks":[109],"drug-perturbed":[111],"profiles":[114],"can":[115],"facilitate":[116],"investigations":[118],"drug-target":[120,173],"interactions,":[121],"utilizing":[122],"such":[123],"large":[124],"heterogeneous":[126],"data":[127,158],"poses":[128],"notable":[129],"challenges.":[130],"To":[131],"improve":[132],"state-of-the-art":[134],"in":[135],"targrotocol.":[137],"Encouragingly,":[138],"GraphDTI":[139,184],"yields":[142],"an":[143,160],"AUC":[144,161],"0.996":[146],"against":[147,177],"validation":[149],"dataset,":[150],"it":[152],"generalizes":[154],"well":[155],"unseen":[157],"0.939,":[163],"significantly":[164],"outperforming":[165],"other":[166],"predictors.":[167],"Finally,":[168],"selected":[169],"examples":[170],"identified":[172],"are":[175],"validated":[176],"biomedical":[179],"literature.":[180],"Numerous":[181],"applications":[182],"include":[185],"investigation":[187],"polypharmacological":[190],"effects,":[191],"side":[192],"effects":[193],"off-target":[195],"binding,":[196],"repositioning":[198],"opportunities.":[199]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
