{"id":"https://openalex.org/W3013954280","doi":"https://doi.org/10.1186/s13321-020-0408-x","title":"Towards reproducible computational drug discovery","display_name":"Towards reproducible computational drug discovery","publication_year":2020,"publication_date":"2020-01-28","ids":{"openalex":"https://openalex.org/W3013954280","doi":"https://doi.org/10.1186/s13321-020-0408-x","mag":"3013954280","pmid":"https://pubmed.ncbi.nlm.nih.gov/33430992"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-020-0408-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-020-0408-x","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-020-0408-x.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-020-0408-x.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069155677","display_name":"Nalini Schaduangrat","orcid":"https://orcid.org/0000-0002-0842-8277"},"institutions":[{"id":"https://openalex.org/I25399158","display_name":"Mahidol University","ror":"https://ror.org/01znkr924","country_code":"TH","type":"education","lineage":["https://openalex.org/I25399158"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Nalini Schaduangrat","raw_affiliation_strings":["Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand","institution_ids":["https://openalex.org/I25399158"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076964957","display_name":"Samuel Lampa","orcid":"https://orcid.org/0000-0001-6740-9212"},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Samuel Lampa","raw_affiliation_strings":["Department of Pharmaceutical Biosciences, Uppsala University, 751 24, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Biosciences, Uppsala University, 751 24, Uppsala, Sweden","institution_ids":["https://openalex.org/I123387679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070315508","display_name":"Saw Simeon","orcid":"https://orcid.org/0000-0002-9045-6970"},"institutions":[{"id":"https://openalex.org/I198105771","display_name":"Kasetsart University","ror":"https://ror.org/05gzceg21","country_code":"TH","type":"education","lineage":["https://openalex.org/I198105771"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Saw Simeon","raw_affiliation_strings":["Interdisciplinary Graduate Program in Bioscience, Faculty of Science, Kasetsart University, 10900, Bangkok, Thailand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interdisciplinary Graduate Program in Bioscience, Faculty of Science, Kasetsart University, 10900, Bangkok, Thailand","institution_ids":["https://openalex.org/I198105771"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067710298","display_name":"M. Paul Gleeson","orcid":"https://orcid.org/0000-0001-6998-7446"},"institutions":[{"id":"https://openalex.org/I91538806","display_name":"King Mongkut's Institute of Technology Ladkrabang","ror":"https://ror.org/055mf0v62","country_code":"TH","type":"education","lineage":["https://openalex.org/I91538806"]}],"countries":["TH"],"is_corresponding":true,"raw_author_name":"Matthew Paul Gleeson","raw_affiliation_strings":["Department of Biomedical Engineering, Faculty of Engineering, King Mongkut's Institute of Technology Ladkrabang, 10520, Bangkok, Thailand. paul.gl@kmitl.ac.th","Department of Biomedical Engineering, Faculty of Engineering, King Mongkut\u2019s Institute of Technology Ladkrabang, 10520, Bangkok, Thailand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Engineering, King Mongkut's Institute of Technology Ladkrabang, 10520, Bangkok, Thailand. paul.gl@kmitl.ac.th","institution_ids":["https://openalex.org/I91538806"]},{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Engineering, King Mongkut\u2019s Institute of Technology Ladkrabang, 10520, Bangkok, Thailand","institution_ids":["https://openalex.org/I91538806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046663348","display_name":"Ola Spjuth","orcid":"https://orcid.org/0000-0002-8083-2864"},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Ola Spjuth","raw_affiliation_strings":["Department of Pharmaceutical Biosciences, Uppsala University, 751 24, Uppsala, Sweden. ola.spjuth@farmbio.uu.se","Department of Pharmaceutical Biosciences, Uppsala University, 751 24, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Biosciences, Uppsala University, 751 24, Uppsala, Sweden. ola.spjuth@farmbio.uu.se","institution_ids":["https://openalex.org/I123387679"]},{"raw_affiliation_string":"Department of Pharmaceutical Biosciences, Uppsala University, 751 24, Uppsala, Sweden","institution_ids":["https://openalex.org/I123387679"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043577834","display_name":"Chanin Nantasenamat","orcid":"https://orcid.org/0000-0003-1040-663X"},"institutions":[{"id":"https://openalex.org/I25399158","display_name":"Mahidol University","ror":"https://ror.org/01znkr924","country_code":"TH","type":"education","lineage":["https://openalex.org/I25399158"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Chanin Nantasenamat","raw_affiliation_strings":["Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand. chanin.nan@mahidol.edu","Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand"],"raw_orcid":"https://orcid.org/0000-0003-1040-663X","affiliations":[{"raw_affiliation_string":"Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand. chanin.nan@mahidol.edu","institution_ids":["https://openalex.org/I25399158"]},{"raw_affiliation_string":"Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand","institution_ids":["https://openalex.org/I25399158"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5067710298"],"corresponding_institution_ids":["https://openalex.org/I91538806"],"apc_list":{"value":2000,"currency":"USD","value_usd":2000},"apc_paid":{"value":2000,"currency":"USD","value_usd":2000},"fwci":48.7502,"has_fulltext":true,"cited_by_count":207,"citation_normalized_percentile":{"value":0.99731464,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"12","issue":"1","first_page":"9","last_page":"9"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9797000288963318,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7947669625282288},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.669983983039856},{"id":"https://openalex.org/keywords/computational-model","display_name":"Computational model","score":0.6261513829231262},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.6232666969299316},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.61316978931427},{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.5091435313224792},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.4876216948032379},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4749881327152252},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1751159429550171},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1624220609664917},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1267377734184265}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7947669625282288},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.669983983039856},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.6261513829231262},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.6232666969299316},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.61316978931427},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.5091435313224792},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.4876216948032379},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4749881327152252},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1751159429550171},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1624220609664917},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1267377734184265},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/s13321-020-0408-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-020-0408-x","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-020-0408-x.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:33430992","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33430992","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6988305","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6988305","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"},{"id":"pmh:oai:DiVA.org:uu-407484","is_oa":true,"landing_page_url":"http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-407484","pdf_url":null,"source":{"id":"https://openalex.org/S4306402042","display_name":"Uppsala University Publications (Uppsala University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I123387679","host_organization_name":"Uppsala University","host_organization_lineage":["https://openalex.org/I123387679"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:fa2aeed8fc134c07983f6a5ff3da167d","is_oa":false,"landing_page_url":"https://doaj.org/article/fa2aeed8fc134c07983f6a5ff3da167d","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, Vol 12, Iss 1, Pp 1-30 (2020)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13321-020-0408-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-020-0408-x","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-020-0408-x.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1042274662","display_name":null,"funder_award_id":"RSA6280075","funder_id":"https://openalex.org/F4320322614","funder_display_name":"Thailand Research Fund"}],"funders":[{"id":"https://openalex.org/F4320313288","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52"},{"id":"https://openalex.org/F4320322614","display_name":"Thailand Research Fund","ror":"https://ror.org/03gd1bh37"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3013954280.pdf","grobid_xml":"https://content.openalex.org/works/W3013954280.grobid-xml"},"referenced_works_count":238,"referenced_works":["https://openalex.org/W16352594","https://openalex.org/W270576676","https://openalex.org/W1489237918","https://openalex.org/W1491938055","https://openalex.org/W1494081638","https://openalex.org/W1500036797","https://openalex.org/W1500560370","https://openalex.org/W1521042556","https://openalex.org/W1526025733","https://openalex.org/W1551600243","https://openalex.org/W1552509723","https://openalex.org/W1583240815","https://openalex.org/W1592950931","https://openalex.org/W1595347157","https://openalex.org/W1596936080","https://openalex.org/W1699155395","https://openalex.org/W1768179097","https://openalex.org/W1835740130","https://openalex.org/W1884382578","https://openalex.org/W1898375943","https://openalex.org/W1952553890","https://openalex.org/W1957147548","https://openalex.org/W1966184395","https://openalex.org/W1969389753","https://openalex.org/W1969688034","https://openalex.org/W1969709265","https://openalex.org/W1970658820","https://openalex.org/W1972108309","https://openalex.org/W1975743735","https://openalex.org/W1978569543","https://openalex.org/W1979900513","https://openalex.org/W1980446929","https://openalex.org/W1983464445","https://openalex.org/W1989292852","https://openalex.org/W1990399577","https://openalex.org/W1993795069","https://openalex.org/W1997250998","https://openalex.org/W2000200100","https://openalex.org/W2002649373","https://openalex.org/W2003423696","https://openalex.org/W2003438872","https://openalex.org/W2006933206","https://openalex.org/W2008985174","https://openalex.org/W2010191214","https://openalex.org/W2011703862","https://openalex.org/W2011771098","https://openalex.org/W2015931265","https://openalex.org/W2016752183","https://openalex.org/W2018518196","https://openalex.org/W2023116290","https://openalex.org/W2026062398","https://openalex.org/W2032605063","https://openalex.org/W2033983313","https://openalex.org/W2035396793","https://openalex.org/W2035417048","https://openalex.org/W2036212683","https://openalex.org/W2036318837","https://openalex.org/W2041729187","https://openalex.org/W2043222175","https://openalex.org/W2050554833","https://openalex.org/W2056279115","https://openalex.org/W2056910808","https://openalex.org/W2058577221","https://openalex.org/W2063495480","https://openalex.org/W2064298635","https://openalex.org/W2064886545","https://openalex.org/W2065412713","https://openalex.org/W2066478796","https://openalex.org/W2068337719","https://openalex.org/W2069950580","https://openalex.org/W2073731205","https://openalex.org/W2074562260","https://openalex.org/W2075849109","https://openalex.org/W2076398537","https://openalex.org/W2077516539","https://openalex.org/W2079639517","https://openalex.org/W2081790908","https://openalex.org/W2085587362","https://openalex.org/W2087466582","https://openalex.org/W2088321706","https://openalex.org/W2089562567","https://openalex.org/W2090467197","https://openalex.org/W2090536881","https://openalex.org/W2092664655","https://openalex.org/W2096859872","https://openalex.org/W2097438318","https://openalex.org/W2099538400","https://openalex.org/W2102066010","https://openalex.org/W2102945991","https://openalex.org/W2107062718","https://openalex.org/W2108285359","https://openalex.org/W2110417468","https://openalex.org/W2110872379","https://openalex.org/W2112411768","https://openalex.org/W2112712631","https://openalex.org/W2114704115","https://openalex.org/W2116976305","https://openalex.org/W2117630412","https://openalex.org/W2118633304","https://openalex.org/W2120850582","https://openalex.org/W2121384662","https://openalex.org/W2121895929","https://openalex.org/W2123100726","https://openalex.org/W2125183513","https://openalex.org/W2126091441","https://openalex.org/W2127821584","https://openalex.org/W2128245586","https://openalex.org/W2128556733","https://openalex.org/W2128607364","https://openalex.org/W2131966673","https://openalex.org/W2132120579","https://openalex.org/W2133990480","https://openalex.org/W2135476796","https://openalex.org/W2136482257","https://openalex.org/W2138512826","https://openalex.org/W2139300598","https://openalex.org/W2140503409","https://openalex.org/W2142188478","https://openalex.org/W2142553313","https://openalex.org/W2142565532","https://openalex.org/W2142573738","https://openalex.org/W2146437022","https://openalex.org/W2146902212","https://openalex.org/W2148797284","https://openalex.org/W2149525061","https://openalex.org/W2150104794","https://openalex.org/W2150314147","https://openalex.org/W2150586932","https://openalex.org/W2150829627","https://openalex.org/W2150908245","https://openalex.org/W2152121191","https://openalex.org/W2153738830","https://openalex.org/W2154019529","https://openalex.org/W2155741020","https://openalex.org/W2155863033","https://openalex.org/W2156495637","https://openalex.org/W2156779720","https://openalex.org/W2159266419","https://openalex.org/W2160097714","https://openalex.org/W2160697532","https://openalex.org/W2161645441","https://openalex.org/W2162011385","https://openalex.org/W2162579416","https://openalex.org/W2164005910","https://openalex.org/W2166462835","https://openalex.org/W2167549547","https://openalex.org/W2167960276","https://openalex.org/W2195203261","https://openalex.org/W2203709713","https://openalex.org/W2204695023","https://openalex.org/W2205755822","https://openalex.org/W2226310234","https://openalex.org/W2228418092","https://openalex.org/W2246750919","https://openalex.org/W2273267066","https://openalex.org/W2285239529","https://openalex.org/W2296589160","https://openalex.org/W2302501749","https://openalex.org/W2323034105","https://openalex.org/W2336155947","https://openalex.org/W2395031187","https://openalex.org/W2406493898","https://openalex.org/W2413797628","https://openalex.org/W2463529734","https://openalex.org/W2464316836","https://openalex.org/W2464666556","https://openalex.org/W2467159148","https://openalex.org/W2471950830","https://openalex.org/W2485914614","https://openalex.org/W2493157521","https://openalex.org/W2525356667","https://openalex.org/W2534303219","https://openalex.org/W2534699084","https://openalex.org/W2539403003","https://openalex.org/W2539985226","https://openalex.org/W2555194672","https://openalex.org/W2565684601","https://openalex.org/W2582341846","https://openalex.org/W2587196972","https://openalex.org/W2593512981","https://openalex.org/W2593632281","https://openalex.org/W2598446296","https://openalex.org/W2604448873","https://openalex.org/W2604622795","https://openalex.org/W2605897695","https://openalex.org/W2610807327","https://openalex.org/W2613409207","https://openalex.org/W2619289668","https://openalex.org/W2622236128","https://openalex.org/W2626073693","https://openalex.org/W2626700575","https://openalex.org/W2631891543","https://openalex.org/W2720702472","https://openalex.org/W2735113199","https://openalex.org/W2735271215","https://openalex.org/W2736621985","https://openalex.org/W2742036652","https://openalex.org/W2753370921","https://openalex.org/W2766666504","https://openalex.org/W2766959028","https://openalex.org/W2767891136","https://openalex.org/W2767963221","https://openalex.org/W2768622420","https://openalex.org/W2770477381","https://openalex.org/W2773787581","https://openalex.org/W2774583629","https://openalex.org/W2784226073","https://openalex.org/W2788724800","https://openalex.org/W2792069497","https://openalex.org/W2807821194","https://openalex.org/W2810419619","https://openalex.org/W2884300959","https://openalex.org/W2888211956","https://openalex.org/W2890725831","https://openalex.org/W2899070097","https://openalex.org/W2900090807","https://openalex.org/W2901954177","https://openalex.org/W2909055772","https://openalex.org/W2913147596","https://openalex.org/W2920383669","https://openalex.org/W2940819419","https://openalex.org/W2947660247","https://openalex.org/W2951092176","https://openalex.org/W2951586246","https://openalex.org/W2963911376","https://openalex.org/W2964148489","https://openalex.org/W2980515854","https://openalex.org/W2998901549","https://openalex.org/W3124690569","https://openalex.org/W4233925072","https://openalex.org/W4242667609","https://openalex.org/W4245430337","https://openalex.org/W4246706001","https://openalex.org/W4251915468","https://openalex.org/W4252803189","https://openalex.org/W4253345420","https://openalex.org/W4285719527","https://openalex.org/W6958873069"],"related_works":["https://openalex.org/W2618286804","https://openalex.org/W2329643025","https://openalex.org/W2002770077","https://openalex.org/W3131163342","https://openalex.org/W2092256833","https://openalex.org/W2142369114","https://openalex.org/W2361728394","https://openalex.org/W2166271660","https://openalex.org/W3089582840","https://openalex.org/W2352631095"],"abstract_inverted_index":{"The":[0],"reproducibility":[1,43],"of":[2,44,73,167,182],"experiments":[3],"has":[4,118],"been":[5,17],"a":[6],"long":[7],"standing":[8],"impediment":[9],"for":[10,28,107,129],"further":[11,148],"scientific":[12],"progress.":[13],"Computational":[14],"methods":[15],"have":[16],"instrumental":[18],"in":[19,91],"drug":[20,46,93,111,169],"discovery":[21,112],"efforts":[22],"owing":[23],"to":[24,122,133,140,144],"its":[25],"multifaceted":[26],"utilization":[27],"data":[29,124],"collection,":[30,178],"pre-processing,":[31],"analysis":[32],"and":[33,78,86,101,125,180],"inference.":[34],"This":[35,48],"article":[36],"provides":[37],"an":[38,173],"in-depth":[39],"coverage":[40],"on":[41,58,98],"the":[42,51,55,109,146,154,157,165,177],"computational":[45,92,96,110,115,168],"discovery.":[47],"review":[49],"explores":[50],"following":[52],"topics:":[53],"(1)":[54],"current":[56],"state-of-the-art":[57],"reproducible":[59,74],"research,":[60],"(2)":[61],"research":[62,75],"documentation":[63],"(e.g.":[64],"electronic":[65],"laboratory":[66],"notebook,":[67,69],"Jupyter":[68],"etc.),":[70],"(3)":[71],"science":[72],"(i.e.":[76,143],"comparison":[77],"contrast":[79],"with":[80],"related":[81],"concepts":[82],"as":[83,132],"replicability,":[84],"reusability":[85],"reliability),":[87],"(4)":[88],"model":[89,99],"development":[90,100],"discovery,":[94],"(5)":[95],"issues":[97],"deployment,":[102],"(6)":[103],"use":[104],"case":[105],"scenarios":[106],"streamlining":[108],"protocol.":[113],"In":[114],"disciplines,":[116],"it":[117],"become":[119],"common":[120],"practice":[121],"share":[123],"programming":[126],"codes":[127],"used":[128],"numerical":[130],"calculations":[131],"not":[134],"only":[135],"facilitate":[136],"reproducibility,":[137],"but":[138],"also":[139],"foster":[141],"collaborations":[142],"drive":[145],"project":[147],"by":[149],"introducing":[150],"new":[151],"ideas,":[152],"growing":[153],"data,":[155],"augmenting":[156],"code,":[158],"etc.).":[159],"It":[160],"is":[161],"therefore":[162],"inevitable":[163],"that":[164],"field":[166],"design":[170],"would":[171],"adopt":[172],"open":[174],"approach":[175],"towards":[176],"curation":[179],"sharing":[181],"data/code.":[183]},"counts_by_year":[{"year":2026,"cited_by_count":23},{"year":2025,"cited_by_count":29},{"year":2024,"cited_by_count":42},{"year":2023,"cited_by_count":52},{"year":2022,"cited_by_count":26},{"year":2021,"cited_by_count":25},{"year":2020,"cited_by_count":10}],"updated_date":"2026-08-28T12:50:07.497085","created_date":"2025-10-10T00:00:00"}
