{"id":"https://openalex.org/W3045213199","doi":"https://doi.org/10.1186/s13321-020-00449-0","title":"rMSIcleanup: an open-source tool for matrix-related peak annotation in mass spectrometry imaging and its application to silver-assisted laser desorption/ionization","display_name":"rMSIcleanup: an open-source tool for matrix-related peak annotation in mass spectrometry imaging and its application to silver-assisted laser desorption/ionization","publication_year":2020,"publication_date":"2020-07-22","ids":{"openalex":"https://openalex.org/W3045213199","doi":"https://doi.org/10.1186/s13321-020-00449-0","mag":"3045213199","pmid":"https://pubmed.ncbi.nlm.nih.gov/33431000"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-020-00449-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-020-00449-0","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13321-020-00449-0.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1186/s13321-020-00449-0.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055282139","display_name":"Gerard Baquer","orcid":"https://orcid.org/0000-0002-4433-4972"},"institutions":[{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Gerard Baquer","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain"],"raw_orcid":"https://orcid.org/0000-0002-4433-4972","affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain","institution_ids":["https://openalex.org/I55952717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034100739","display_name":"Lluc Sement\u00e9","orcid":"https://orcid.org/0000-0001-9956-6570"},"institutions":[{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Lluc Sement\u00e9","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain"],"raw_orcid":"https://orcid.org/0000-0001-9956-6570","affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain","institution_ids":["https://openalex.org/I55952717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048397358","display_name":"Mar\u00eda Garc\u00eda\u2010Altares","orcid":"https://orcid.org/0000-0003-4255-1487"},"institutions":[{"id":"https://openalex.org/I4210092133","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red Diabetes y Enfermedades Metab\u00f3licas Asociadas","ror":"https://ror.org/00dwgct76","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210092133","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Mar\u00eda Garc\u00eda-Altares","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain. maria.garcia-altares@urv.cat","Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), 28029, Madrid, Spain. maria.garcia-altares@urv.cat","Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain"],"raw_orcid":"https://orcid.org/0000-0003-4255-1487","affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain. maria.garcia-altares@urv.cat","institution_ids":["https://openalex.org/I55952717"]},{"raw_affiliation_string":"Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), 28029, Madrid, Spain. maria.garcia-altares@urv.cat","institution_ids":["https://openalex.org/I4210092133"]},{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain","institution_ids":["https://openalex.org/I55952717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100673531","display_name":"Young\u2010Jin Lee","orcid":"https://orcid.org/0000-0002-2533-5371"},"institutions":[{"id":"https://openalex.org/I173911158","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78","country_code":"US","type":"education","lineage":["https://openalex.org/I173911158"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Young Jin Lee","raw_affiliation_strings":["Department of Chemistry, Iowa State University, Ames, IA, 50011, USA"],"raw_orcid":"https://orcid.org/0000-0002-2533-5371","affiliations":[{"raw_affiliation_string":"Department of Chemistry, Iowa State University, Ames, IA, 50011, USA","institution_ids":["https://openalex.org/I173911158"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038314260","display_name":"Pierre Chaurand","orcid":"https://orcid.org/0000-0001-6821-7001"},"institutions":[{"id":"https://openalex.org/I70931966","display_name":"Universit\u00e9 de Montr\u00e9al","ror":"https://ror.org/0161xgx34","country_code":"CA","type":"education","lineage":["https://openalex.org/I70931966"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Pierre Chaurand","raw_affiliation_strings":["Department of Chemistry, Universit\u00e9 de Montr\u00e9al, Montreal, QC, H3C 3J7, Canada"],"raw_orcid":"https://orcid.org/0000-0001-6821-7001","affiliations":[{"raw_affiliation_string":"Department of Chemistry, Universit\u00e9 de Montr\u00e9al, Montreal, QC, H3C 3J7, Canada","institution_ids":["https://openalex.org/I70931966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084239219","display_name":"Xavier Correig","orcid":"https://orcid.org/0000-0002-6902-3054"},"institutions":[{"id":"https://openalex.org/I2801724371","display_name":"Spanish Biomedical Research Centre in Physiopathology of Obesity and Nutrition","ror":"https://ror.org/02s65tk16","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801724371"]},{"id":"https://openalex.org/I4210092133","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red Diabetes y Enfermedades Metab\u00f3licas Asociadas","ror":"https://ror.org/00dwgct76","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210092133","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210101772","display_name":"Institut de Recerca Biom\u00e8dica Catalunya Sud","ror":"https://ror.org/01av3a615","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210101772","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Xavier Correig","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain","Institut d'Investigaci\u00f3 Sanit\u00e0ria Pere Virgili, Tarragona, Spain","Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), 28029, Madrid, Spain"],"raw_orcid":"https://orcid.org/0000-0002-6902-3054","affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain","institution_ids":["https://openalex.org/I55952717"]},{"raw_affiliation_string":"Institut d'Investigaci\u00f3 Sanit\u00e0ria Pere Virgili, Tarragona, Spain","institution_ids":["https://openalex.org/I4210101772"]},{"raw_affiliation_string":"Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), 28029, Madrid, Spain","institution_ids":["https://openalex.org/I2801724371","https://openalex.org/I4210092133"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062192621","display_name":"Pere R\u00e0fols","orcid":"https://orcid.org/0000-0002-9240-4058"},"institutions":[{"id":"https://openalex.org/I2801724371","display_name":"Spanish Biomedical Research Centre in Physiopathology of Obesity and Nutrition","ror":"https://ror.org/02s65tk16","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801724371"]},{"id":"https://openalex.org/I4210092133","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red Diabetes y Enfermedades Metab\u00f3licas Asociadas","ror":"https://ror.org/00dwgct76","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210092133","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210101772","display_name":"Institut de Recerca Biom\u00e8dica Catalunya Sud","ror":"https://ror.org/01av3a615","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210101772","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Pere R\u00e0fols","raw_affiliation_strings":["Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain","Institut d'Investigaci\u00f3 Sanit\u00e0ria Pere Virgili, Tarragona, Spain","Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), 28029, Madrid, Spain"],"raw_orcid":"https://orcid.org/0000-0002-9240-4058","affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain","institution_ids":["https://openalex.org/I55952717"]},{"raw_affiliation_string":"Institut d'Investigaci\u00f3 Sanit\u00e0ria Pere Virgili, Tarragona, Spain","institution_ids":["https://openalex.org/I4210101772"]},{"raw_affiliation_string":"Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), 28029, Madrid, Spain","institution_ids":["https://openalex.org/I2801724371","https://openalex.org/I4210092133"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5048397358"],"corresponding_institution_ids":["https://openalex.org/I4210092133","https://openalex.org/I55952717"],"apc_list":{"value":2190,"currency":"USD","value_usd":2190},"apc_paid":{"value":2190,"currency":"USD","value_usd":2190},"fwci":0.4472,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.58456536,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"12","issue":"1","first_page":"45","last_page":"45"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mass-spectrometry-imaging","display_name":"Mass spectrometry imaging","score":0.7502580285072327},{"id":"https://openalex.org/keywords/mass-spectrometry","display_name":"Mass spectrometry","score":0.6517004370689392},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6185635328292847},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5782695412635803},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5337128639221191},{"id":"https://openalex.org/keywords/matrix-assisted-laser-desorption/ionization","display_name":"Matrix-assisted laser desorption/ionization","score":0.5271872282028198},{"id":"https://openalex.org/keywords/matrix","display_name":"Matrix (chemical analysis)","score":0.48233935236930847},{"id":"https://openalex.org/keywords/principal-component-analysis","display_name":"Principal component analysis","score":0.4789291322231293},{"id":"https://openalex.org/keywords/desorption","display_name":"Desorption","score":0.47469133138656616},{"id":"https://openalex.org/keywords/analyte","display_name":"Analyte","score":0.45482519268989563},{"id":"https://openalex.org/keywords/maldi-imaging","display_name":"MALDI imaging","score":0.4275428354740143},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.39486390352249146},{"id":"https://openalex.org/keywords/analytical-chemistry","display_name":"Analytical Chemistry (journal)","score":0.36568936705589294},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32893794775009155},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.27736878395080566},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.17329955101013184},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.12587681412696838}],"concepts":[{"id":"https://openalex.org/C24066741","wikidata":"https://www.wikidata.org/wiki/Q3796564","display_name":"Mass spectrometry imaging","level":3,"score":0.7502580285072327},{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.6517004370689392},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6185635328292847},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5782695412635803},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5337128639221191},{"id":"https://openalex.org/C75280812","wikidata":"https://www.wikidata.org/wiki/Q190382","display_name":"Matrix-assisted laser desorption/ionization","level":4,"score":0.5271872282028198},{"id":"https://openalex.org/C106487976","wikidata":"https://www.wikidata.org/wiki/Q685816","display_name":"Matrix (chemical analysis)","level":2,"score":0.48233935236930847},{"id":"https://openalex.org/C27438332","wikidata":"https://www.wikidata.org/wiki/Q2873","display_name":"Principal component analysis","level":2,"score":0.4789291322231293},{"id":"https://openalex.org/C162711632","wikidata":"https://www.wikidata.org/wiki/Q905514","display_name":"Desorption","level":3,"score":0.47469133138656616},{"id":"https://openalex.org/C10390740","wikidata":"https://www.wikidata.org/wiki/Q2282401","display_name":"Analyte","level":2,"score":0.45482519268989563},{"id":"https://openalex.org/C101092202","wikidata":"https://www.wikidata.org/wiki/Q6714252","display_name":"MALDI imaging","level":5,"score":0.4275428354740143},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.39486390352249146},{"id":"https://openalex.org/C113196181","wikidata":"https://www.wikidata.org/wiki/Q485223","display_name":"Analytical Chemistry (journal)","level":2,"score":0.36568936705589294},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32893794775009155},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.27736878395080566},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.17329955101013184},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.12587681412696838},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C150394285","wikidata":"https://www.wikidata.org/wiki/Q180254","display_name":"Adsorption","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13321-020-00449-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-020-00449-0","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13321-020-00449-0.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:33431000","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33431000","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7374922","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7374922","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:2fca293c25614a218a1624ab40ce1fd5","is_oa":true,"landing_page_url":"https://doaj.org/article/2fca293c25614a218a1624ab40ce1fd5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, Vol 12, Iss 1, Pp 1-13 (2020)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13321-020-00449-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-020-00449-0","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13321-020-00449-0.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1077496425","display_name":null,"funder_award_id":"TEC2015\u201069076\u2010P","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G2201178482","display_name":null,"funder_award_id":"RTI2018-096061-B-100","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G6341136772","display_name":null,"funder_award_id":"2018 BP 00188","funder_id":"https://openalex.org/F4320334830","funder_display_name":"Ag\u00e8ncia de Gesti\u00f3 d'Ajuts Universitaris i de Recerca"},{"id":"https://openalex.org/G7187218847","display_name":null,"funder_award_id":"713679","funder_id":"https://openalex.org/F4320335254","funder_display_name":"Horizon 2020"},{"id":"https://openalex.org/G7882948083","display_name":null,"funder_award_id":"2017PMF-PIPF-60","funder_id":"https://openalex.org/F4320324497","funder_display_name":"Universitat Rovira i Virgili"}],"funders":[{"id":"https://openalex.org/F4320321837","display_name":"Ministerio de Econom\u00eda y Competitividad","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320324497","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46"},{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"},{"id":"https://openalex.org/F4320334830","display_name":"Ag\u00e8ncia de Gesti\u00f3 d'Ajuts Universitaris i de Recerca","ror":"https://ror.org/01n4pqe45"},{"id":"https://openalex.org/F4320335254","display_name":"Horizon 2020","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3045213199.pdf","grobid_xml":"https://content.openalex.org/works/W3045213199.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W1651093245","https://openalex.org/W1858221147","https://openalex.org/W1976526581","https://openalex.org/W1978748421","https://openalex.org/W1979363507","https://openalex.org/W1984002945","https://openalex.org/W1986693684","https://openalex.org/W1989931746","https://openalex.org/W1993847458","https://openalex.org/W2022716622","https://openalex.org/W2023370513","https://openalex.org/W2044712639","https://openalex.org/W2046393687","https://openalex.org/W2057652593","https://openalex.org/W2073296628","https://openalex.org/W2099658740","https://openalex.org/W2118473535","https://openalex.org/W2127943905","https://openalex.org/W2140695271","https://openalex.org/W2170783810","https://openalex.org/W2277192679","https://openalex.org/W2295124130","https://openalex.org/W2320251384","https://openalex.org/W2324663456","https://openalex.org/W2344132213","https://openalex.org/W2507788510","https://openalex.org/W2561045520","https://openalex.org/W2597856736","https://openalex.org/W2608264578","https://openalex.org/W2750322823","https://openalex.org/W2773656206","https://openalex.org/W2795838644","https://openalex.org/W2805782009","https://openalex.org/W2896642579","https://openalex.org/W2899070097","https://openalex.org/W2905245744","https://openalex.org/W2911081589","https://openalex.org/W2962772482","https://openalex.org/W2967786662","https://openalex.org/W2970468176","https://openalex.org/W2971945260","https://openalex.org/W2979874034"],"related_works":["https://openalex.org/W36201071","https://openalex.org/W1965955027","https://openalex.org/W2413445604","https://openalex.org/W2017349873","https://openalex.org/W4392166890","https://openalex.org/W4200402861","https://openalex.org/W2143740707","https://openalex.org/W2007802988","https://openalex.org/W2022978558","https://openalex.org/W2530826775"],"abstract_inverted_index":{"Mass":[0],"spectrometry":[1],"imaging":[2],"(MSI)":[3],"has":[4],"become":[5],"a":[6],"mature,":[7],"widespread":[8],"analytical":[9],"technique":[10],"to":[11,20,50,56,76,85,121,127],"perform":[12],"non-targeted":[13],"spatial":[14,92],"metabolomics.":[15],"However,":[16],"the":[17,26,34,58,66,82,86,91,99,133,155],"compounds":[18],"used":[19],"promote":[21],"desorption":[22,112],"and":[23,52,62,78,90,143],"ionization":[24,113],"of":[25,60,94,132,145],"analyte":[27],"during":[28],"acquisition":[29],"cause":[30],"spectral":[31,149],"interferences":[32],"in":[33,43,65,166],"low":[35],"mass":[36],"range":[37],"that":[38,141],"hinder":[39],"downstream":[40],"data":[41,134,150],"processing":[42],"metabolomics":[44],"applications.":[45],"Thus,":[46],"it":[47],"is":[48],"advisable":[49],"annotate":[51,77],"remove":[53,79],"matrix-related":[54,146,159],"peaks":[55],"reduce":[57],"number":[59],"redundant":[61],"non-biologically-relevant":[63],"variables":[64],"dataset.":[67],"We":[68],"have":[69],"developed":[70],"rMSIcleanup,":[71],"an":[72],"open-source":[73],"R":[74],"package":[75],"signals":[80,125,147],"from":[81],"matrix,":[83],"according":[84],"matrix":[87],"chemical":[88],"composition":[89],"distribution":[93],"its":[95],"ions.":[96],"To":[97],"validate":[98],"annotation":[100,142,161],"method,":[101],"rMSIcleanup":[102,165],"was":[103,119],"challenged":[104],"with":[105],"several":[106],"images":[107],"acquired":[108],"using":[109,135],"silver-assisted":[110],"laser":[111],"MSI":[114,167],"(AgLDI":[115],"MSI).":[116],"The":[117,152],"algorithm":[118],"able":[120],"correctly":[122],"classify":[123],"m/z":[124],"related":[126],"silver":[128],"clusters.":[129],"Visual":[130],"exploration":[131],"Principal":[136],"Component":[137],"Analysis":[138],"(PCA)":[139],"demonstrated":[140],"removal":[144],"improved":[148],"post-processing.":[151],"results":[153],"highlight":[154],"need":[156],"for":[157],"including":[158],"peak":[160],"tools":[162],"such":[163],"as":[164],"workflows.":[168]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
