{"id":"https://openalex.org/W3030970797","doi":"https://doi.org/10.1186/s13321-020-00428-5","title":"Industry-scale application and evaluation of deep learning for drug target prediction","display_name":"Industry-scale application and evaluation of deep learning for drug target prediction","publication_year":2020,"publication_date":"2020-04-19","ids":{"openalex":"https://openalex.org/W3030970797","doi":"https://doi.org/10.1186/s13321-020-00428-5","mag":"3030970797","pmid":"https://pubmed.ncbi.nlm.nih.gov/33430964"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-020-00428-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-020-00428-5","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-020-00428-5","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-020-00428-5","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066956474","display_name":"No\u00e9 Sturm","orcid":"https://orcid.org/0000-0002-9775-7872"},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"No\u00e9 Sturm","raw_affiliation_strings":["Clinical Pharmacology and Safety Science, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden. noesturm@gmail.com","Clinical Pharmacology and Safety Science, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden"],"affiliations":[{"raw_affiliation_string":"Clinical Pharmacology and Safety Science, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden. noesturm@gmail.com","institution_ids":[]},{"raw_affiliation_string":"Clinical Pharmacology and Safety Science, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101889304","display_name":"Andreas Mayr","orcid":"https://orcid.org/0000-0002-1204-0881"},"institutions":[{"id":"https://openalex.org/I121883995","display_name":"Johannes Kepler University of Linz","ror":"https://ror.org/052r2xn60","country_code":"AT","type":"education","lineage":["https://openalex.org/I121883995"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Andreas Mayr","raw_affiliation_strings":["LIT AI Lab & Institute for Machine Learning, Johannes Kepler University Linz, Altenberger Str. 69, 4040, Linz, Austria"],"affiliations":[{"raw_affiliation_string":"LIT AI Lab & Institute for Machine Learning, Johannes Kepler University Linz, Altenberger Str. 69, 4040, Linz, Austria","institution_ids":["https://openalex.org/I121883995"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087485923","display_name":"Thanh Le Van","orcid":null},"institutions":[{"id":"https://openalex.org/I137982388","display_name":"Janssen (Belgium)","ror":"https://ror.org/04yzcpd71","country_code":"BE","type":"company","lineage":["https://openalex.org/I1330063522","https://openalex.org/I137982388"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Thanh Le Van","raw_affiliation_strings":["High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen Pharmaceutica, Turnhoutseweg 30, 2349, Beerse, Belgium"],"affiliations":[{"raw_affiliation_string":"High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen Pharmaceutica, Turnhoutseweg 30, 2349, Beerse, Belgium","institution_ids":["https://openalex.org/I137982388"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065577251","display_name":"Vladimir Chupakhin","orcid":"https://orcid.org/0000-0003-1097-8603"},"institutions":[{"id":"https://openalex.org/I4210151386","display_name":"Janssen (United States)","ror":"https://ror.org/05af73403","country_code":"US","type":"company","lineage":["https://openalex.org/I1330063522","https://openalex.org/I4210151386"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vladimir Chupakhin","raw_affiliation_strings":["High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen R&D, 1400 McKean Rd, Spring House, Pennsylvania, 19002, USA"],"affiliations":[{"raw_affiliation_string":"High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen R&D, 1400 McKean Rd, Spring House, Pennsylvania, 19002, USA","institution_ids":["https://openalex.org/I4210151386"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019296124","display_name":"Hugo Ceulemans","orcid":"https://orcid.org/0000-0002-7059-4399"},"institutions":[{"id":"https://openalex.org/I137982388","display_name":"Janssen (Belgium)","ror":"https://ror.org/04yzcpd71","country_code":"BE","type":"company","lineage":["https://openalex.org/I1330063522","https://openalex.org/I137982388"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Hugo Ceulemans","raw_affiliation_strings":["High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen Pharmaceutica, Turnhoutseweg 30, 2349, Beerse, Belgium"],"affiliations":[{"raw_affiliation_string":"High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen Pharmaceutica, Turnhoutseweg 30, 2349, Beerse, Belgium","institution_ids":["https://openalex.org/I137982388"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081681147","display_name":"J\u00f6rg K. Wegner","orcid":"https://orcid.org/0000-0002-1852-9434"},"institutions":[{"id":"https://openalex.org/I137982388","display_name":"Janssen (Belgium)","ror":"https://ror.org/04yzcpd71","country_code":"BE","type":"company","lineage":["https://openalex.org/I1330063522","https://openalex.org/I137982388"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Joerg Wegner","raw_affiliation_strings":["High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen Pharmaceutica, Turnhoutseweg 30, 2349, Beerse, Belgium"],"affiliations":[{"raw_affiliation_string":"High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen Pharmaceutica, Turnhoutseweg 30, 2349, Beerse, Belgium","institution_ids":["https://openalex.org/I137982388"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008890833","display_name":"Jose-Felipe Golib-Dzib","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jose-Felipe Golib-Dzib","raw_affiliation_strings":["High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen Cilag SA, Calle R\u00edo Jarama, 75A, 45007, Toledo, Spain"],"affiliations":[{"raw_affiliation_string":"High-Dimensional Biology & Discovery Data Sciences, Discovery Sciences, Janssen Cilag SA, Calle R\u00edo Jarama, 75A, 45007, Toledo, Spain","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056989071","display_name":"Nina Jeliazkova","orcid":"https://orcid.org/0000-0002-4322-6179"},"institutions":[{"id":"https://openalex.org/I4210145716","display_name":"IDEAconsult","ror":"https://ror.org/043r2f182","country_code":"BG","type":"other","lineage":["https://openalex.org/I4210145716"]}],"countries":["BG"],"is_corresponding":false,"raw_author_name":"Nina Jeliazkova","raw_affiliation_strings":["Ideaconsult Ltd., 4. Angel Kanchev Str., 1000, Sofia, Bulgaria"],"affiliations":[{"raw_affiliation_string":"Ideaconsult Ltd., 4. Angel Kanchev Str., 1000, Sofia, Bulgaria","institution_ids":["https://openalex.org/I4210145716"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041169092","display_name":"Yves Vandriessche","orcid":"https://orcid.org/0000-0001-7453-3457"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yves Vandriessche","raw_affiliation_strings":["Intel Corporation, Data Center Group, Veldkant 31, 2550, Kontich, Belgium"],"affiliations":[{"raw_affiliation_string":"Intel Corporation, Data Center Group, Veldkant 31, 2550, Kontich, Belgium","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071248070","display_name":"Stanislav B\u00f6hm","orcid":"https://orcid.org/0000-0001-8044-7694"},"institutions":[{"id":"https://openalex.org/I142208455","display_name":"VSB - Technical University of Ostrava","ror":"https://ror.org/05x8mcb75","country_code":"CZ","type":"education","lineage":["https://openalex.org/I142208455"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Stanislav B\u00f6hm","raw_affiliation_strings":["IT4Innovations, VSB - Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic","IT4Innovations, VSB \u2013 Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic"],"affiliations":[{"raw_affiliation_string":"IT4Innovations, VSB - Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic","institution_ids":[]},{"raw_affiliation_string":"IT4Innovations, VSB \u2013 Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic","institution_ids":["https://openalex.org/I142208455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014450523","display_name":"Vojt\u011bch Cima","orcid":"https://orcid.org/0000-0003-4601-8495"},"institutions":[{"id":"https://openalex.org/I142208455","display_name":"VSB - Technical University of Ostrava","ror":"https://ror.org/05x8mcb75","country_code":"CZ","type":"education","lineage":["https://openalex.org/I142208455"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Vojtech Cima","raw_affiliation_strings":["IT4Innovations, VSB - Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic","IT4Innovations, VSB \u2013 Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic"],"affiliations":[{"raw_affiliation_string":"IT4Innovations, VSB - Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic","institution_ids":[]},{"raw_affiliation_string":"IT4Innovations, VSB \u2013 Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic","institution_ids":["https://openalex.org/I142208455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087746268","display_name":"Jan Martinovi\u010d","orcid":"https://orcid.org/0000-0001-7944-8956"},"institutions":[{"id":"https://openalex.org/I142208455","display_name":"VSB - Technical University of Ostrava","ror":"https://ror.org/05x8mcb75","country_code":"CZ","type":"education","lineage":["https://openalex.org/I142208455"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Jan Martinovic","raw_affiliation_strings":["IT4Innovations, VSB - Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic","IT4Innovations, VSB \u2013 Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic"],"affiliations":[{"raw_affiliation_string":"IT4Innovations, VSB - Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic","institution_ids":[]},{"raw_affiliation_string":"IT4Innovations, VSB \u2013 Technical University of Ostrava, 17. Listopadu 2172/15, 70800, Ostrava-Poruba, Czech Republic","institution_ids":["https://openalex.org/I142208455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031183535","display_name":"Nigel Greene","orcid":"https://orcid.org/0000-0003-0433-4596"},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Nigel Greene","raw_affiliation_strings":["Clinical Pharmacology and Safety Science, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden"],"affiliations":[{"raw_affiliation_string":"Clinical Pharmacology and Safety Science, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062390065","display_name":"Tom Vander Aa","orcid":"https://orcid.org/0000-0002-1504-5266"},"institutions":[{"id":"https://openalex.org/I4210114974","display_name":"IMEC","ror":"https://ror.org/02kcbn207","country_code":"BE","type":"nonprofit","lineage":["https://openalex.org/I4210114974"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Tom Vander Aa","raw_affiliation_strings":["Exascience Lab, Imec, Kapeldreef 75, 3001, Louvain, Belgium"],"affiliations":[{"raw_affiliation_string":"Exascience Lab, Imec, Kapeldreef 75, 3001, Louvain, Belgium","institution_ids":["https://openalex.org/I4210114974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004692639","display_name":"Thomas J. Ashby","orcid":"https://orcid.org/0000-0002-9259-6475"},"institutions":[{"id":"https://openalex.org/I4210114974","display_name":"IMEC","ror":"https://ror.org/02kcbn207","country_code":"BE","type":"nonprofit","lineage":["https://openalex.org/I4210114974"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Thomas J. Ashby","raw_affiliation_strings":["Exascience Lab, Imec, Kapeldreef 75, 3001, Louvain, Belgium"],"affiliations":[{"raw_affiliation_string":"Exascience Lab, Imec, Kapeldreef 75, 3001, Louvain, Belgium","institution_ids":["https://openalex.org/I4210114974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053148274","display_name":"Sepp Hochreiter","orcid":"https://orcid.org/0000-0001-7449-2528"},"institutions":[{"id":"https://openalex.org/I121883995","display_name":"Johannes Kepler University of Linz","ror":"https://ror.org/052r2xn60","country_code":"AT","type":"education","lineage":["https://openalex.org/I121883995"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Sepp Hochreiter","raw_affiliation_strings":["LIT AI Lab & Institute for Machine Learning, Johannes Kepler University Linz, Altenberger Str. 69, 4040, Linz, Austria"],"affiliations":[{"raw_affiliation_string":"LIT AI Lab & Institute for Machine Learning, Johannes Kepler University Linz, Altenberger Str. 69, 4040, Linz, Austria","institution_ids":["https://openalex.org/I121883995"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076975589","display_name":"Ola Engkvist","orcid":"https://orcid.org/0000-0003-4970-6461"},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Ola Engkvist","raw_affiliation_strings":["Hit Discovery, Discovery Sciences, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden"],"affiliations":[{"raw_affiliation_string":"Hit Discovery, Discovery Sciences, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079632405","display_name":"G\u00fcnter Klambauer","orcid":"https://orcid.org/0000-0003-2861-5552"},"institutions":[{"id":"https://openalex.org/I121883995","display_name":"Johannes Kepler University of Linz","ror":"https://ror.org/052r2xn60","country_code":"AT","type":"education","lineage":["https://openalex.org/I121883995"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"G\u00fcnter Klambauer","raw_affiliation_strings":["LIT AI Lab & Institute for Machine Learning, Johannes Kepler University Linz, Altenberger Str. 69, 4040, Linz, Austria. klambauer@ml.jku.at","LIT AI Lab & Institute for Machine Learning, Johannes Kepler University Linz, Altenberger Str. 69, 4040, Linz, Austria"],"affiliations":[{"raw_affiliation_string":"LIT AI Lab & Institute for Machine Learning, Johannes Kepler University Linz, Altenberger Str. 69, 4040, Linz, Austria. klambauer@ml.jku.at","institution_ids":[]},{"raw_affiliation_string":"LIT AI Lab & Institute for Machine Learning, Johannes Kepler University Linz, Altenberger Str. 69, 4040, Linz, Austria","institution_ids":["https://openalex.org/I121883995"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100729955","display_name":"Hongming Chen","orcid":"https://orcid.org/0000-0002-4470-876X"},"institutions":[{"id":"https://openalex.org/I4210143795","display_name":"AstraZeneca (Sweden)","ror":"https://ror.org/04wwrrg31","country_code":"SE","type":"company","lineage":["https://openalex.org/I105036370","https://openalex.org/I4210143795"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Hongming Chen","raw_affiliation_strings":["Hit Discovery, Discovery Sciences, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden. Hongming.Chen71@hotmail.com","Hit Discovery, Discovery Sciences, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden"],"affiliations":[{"raw_affiliation_string":"Hit Discovery, Discovery Sciences, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden. Hongming.Chen71@hotmail.com","institution_ids":[]},{"raw_affiliation_string":"Hit Discovery, Discovery Sciences, R&D BioPharmaceuticals, AstraZeneca, Pepparedsleden 1, 43183, M\u00f6lndal, Sweden","institution_ids":["https://openalex.org/I4210143795"]}]}],"institutions":[],"countries_distinct_count":6,"institutions_distinct_count":19,"corresponding_author_ids":["https://openalex.org/A5066956474"],"corresponding_institution_ids":["https://openalex.org/I4210143795"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":5.1963,"has_fulltext":true,"cited_by_count":55,"citation_normalized_percentile":{"value":0.96306439,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"12","issue":"1","first_page":"26","last_page":"26"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9886999726295471,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9822999835014343,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.645592212677002},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.5427331328392029},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.4875185191631317},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.48120883107185364},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.4727811813354492},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4662524461746216},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.44941481947898865},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4408084452152252},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35916614532470703},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1781933307647705},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.16626587510108948},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15984880924224854}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.645592212677002},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.5427331328392029},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.4875185191631317},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.48120883107185364},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.4727811813354492},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4662524461746216},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.44941481947898865},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4408084452152252},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35916614532470703},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1781933307647705},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.16626587510108948},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15984880924224854},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/s13321-020-00428-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-020-00428-5","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-020-00428-5","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:33430964","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33430964","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:55e32dbe32dd49f1ba3bfa146348afae","is_oa":true,"landing_page_url":"https://doaj.org/article/55e32dbe32dd49f1ba3bfa146348afae","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, Vol 12, Iss 1, Pp 1-13 (2020)","raw_type":"article"},{"id":"pmh:oai:dspace.vsb.cz:10084/139495","is_oa":true,"landing_page_url":"http://hdl.handle.net/10084/139495","pdf_url":null,"source":{"id":"https://openalex.org/S4306401668","display_name":"DSpace V\u0160B-TUO (V\u0160B-TUO)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I142208455","host_organization_name":"VSB - Technical University of Ostrava","host_organization_lineage":["https://openalex.org/I142208455"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Peer-reviewed"},{"id":"pmh:oai:pubmedcentral.nih.gov:7169028","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7169028","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13321-020-00428-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-020-00428-5","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-020-00428-5","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.5400000214576721,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G2892863587","display_name":null,"funder_award_id":"67155","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G4106241395","display_name":null,"funder_award_id":"Not applicable","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5011736886","display_name":null,"funder_award_id":"M2015","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5023028684","display_name":"Exascale Compound Activity Prediction Engine","funder_award_id":"671555","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G7863948404","display_name":null,"funder_award_id":"671555","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G8051717526","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8318064016","display_name":null,"funder_award_id":"Horizon","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321181","display_name":"Austrian Science Fund","ror":"https://ror.org/013tf3c58"},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320337144","display_name":"National Supercomputing Center, Korea Institute of Science and Technology Information","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3030970797.pdf","grobid_xml":"https://content.openalex.org/works/W3030970797.grobid-xml"},"referenced_works_count":61,"referenced_works":["https://openalex.org/W46659105","https://openalex.org/W130193107","https://openalex.org/W217834111","https://openalex.org/W1486317198","https://openalex.org/W1583837637","https://openalex.org/W1591609796","https://openalex.org/W1655274992","https://openalex.org/W1665214252","https://openalex.org/W1686810756","https://openalex.org/W1690919088","https://openalex.org/W1809873675","https://openalex.org/W1869829652","https://openalex.org/W1984994707","https://openalex.org/W1988037271","https://openalex.org/W1999798000","https://openalex.org/W2040369353","https://openalex.org/W2053154970","https://openalex.org/W2053717624","https://openalex.org/W2076056618","https://openalex.org/W2088970363","https://openalex.org/W2091432990","https://openalex.org/W2092053124","https://openalex.org/W2094999579","https://openalex.org/W2117130368","https://openalex.org/W2119821739","https://openalex.org/W2127019019","https://openalex.org/W2141766660","https://openalex.org/W2154139219","https://openalex.org/W2163605009","https://openalex.org/W2189911347","https://openalex.org/W2194775991","https://openalex.org/W2295598076","https://openalex.org/W2320034101","https://openalex.org/W2519019522","https://openalex.org/W2558999090","https://openalex.org/W2566398673","https://openalex.org/W2593632281","https://openalex.org/W2604272474","https://openalex.org/W2612690371","https://openalex.org/W2622236128","https://openalex.org/W2624413595","https://openalex.org/W2734982589","https://openalex.org/W2751756351","https://openalex.org/W2771996273","https://openalex.org/W2790801434","https://openalex.org/W2790808809","https://openalex.org/W2806547269","https://openalex.org/W2899070097","https://openalex.org/W2905607758","https://openalex.org/W2909055772","https://openalex.org/W2911107164","https://openalex.org/W2911964244","https://openalex.org/W2914836117","https://openalex.org/W2920735258","https://openalex.org/W2931360560","https://openalex.org/W2937307539","https://openalex.org/W2940242941","https://openalex.org/W2966050614","https://openalex.org/W2974690583","https://openalex.org/W3102476541","https://openalex.org/W4239510810"],"related_works":["https://openalex.org/W4375867731","https://openalex.org/W2611989081","https://openalex.org/W2480711475","https://openalex.org/W2731899572","https://openalex.org/W4230611425","https://openalex.org/W4294635752","https://openalex.org/W4304166257","https://openalex.org/W4206379684","https://openalex.org/W4383066092","https://openalex.org/W4380075502"],"abstract_inverted_index":{"Artificial":[0],"intelligence":[1],"(AI)":[2],"is":[3,172],"undergoing":[4],"a":[5,78,132],"revolution":[6],"thanks":[7],"to":[8,59,109,131,137,163],"the":[9,45,173,178,189,197],"breakthroughs":[10],"of":[11,47,55,77,180,191,199],"machine":[12,90,99,118,147,158,181],"learning":[13,100,119,145,148,159,182,186],"algorithms":[14],"in":[15],"computer":[16],"vision,":[17],"speech":[18],"recognition,":[19],"natural":[20],"language":[21],"processing":[22],"and":[23,69,72,92,183,194],"generative":[24],"modelling.":[25],"Recent":[26],"works":[27],"on":[28,122],"publicly":[29,200],"available":[30],"pharmaceutical":[31,88,111,165],"data":[32,49,57,105,124],"showed":[33],"that":[34,54,83,117,143],"AI":[35],"methods":[36],"are":[37],"highly":[38],"promising":[39],"for":[40],"Drug":[41],"Target":[42],"prediction.":[43],"However,":[44],"quality":[46],"public":[48,104,123],"might":[50],"be":[51,107],"different":[52,60,64],"than":[53],"industry":[56,112,138],"due":[58],"labs":[61],"reporting":[62],"measurements,":[63],"measurement":[65],"techniques,":[66],"fewer":[67],"samples":[68],"less":[70],"diverse":[71],"specialized":[73],"assays.":[74],"As":[75],"part":[76],"European":[79],"funded":[80],"project":[81],"(ExCAPE),":[82],"brought":[84],"together":[85],"expertise":[86],"from":[87,103],"industry,":[89],"learning,":[91],"high-performance":[93],"computing,":[94],"we":[95,141],"investigated":[96],"how":[97],"well":[98],"models":[101,120,149,204],"obtained":[102],"can":[106,125],"transferred":[108],"internal":[110,164],"data.":[113,139],"Our":[114],"results":[115],"show":[116],"trained":[121,155],"indeed":[126],"maintain":[127],"their":[128],"predictive":[129],"power":[130],"large":[133],"degree":[134],"when":[135,161],"applied":[136,162],"Moreover,":[140],"observed":[142],"deep":[144,185],"derived":[146],"outperformed":[150],"comparable":[151],"models,":[152],"which":[153],"were":[154],"by":[156],"other":[157],"algorithms,":[160],"company":[166],"datasets.":[167],"To":[168],"our":[169],"knowledge,":[170],"this":[171],"first":[174],"large-scale":[175],"study":[176],"evaluating":[177],"potential":[179],"especially":[184],"directly":[187],"at":[188],"level":[190],"industry-scale":[192],"settings":[193],"moreover":[195],"investigating":[196],"transferability":[198],"learned":[201],"target":[202],"prediction":[203,208],"towards":[205],"industrial":[206],"bioactivity":[207],"pipelines.":[209]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":14},{"year":2020,"cited_by_count":8}],"updated_date":"2026-03-29T08:15:47.926485","created_date":"2025-10-10T00:00:00"}
