{"id":"https://openalex.org/W2918756535","doi":"https://doi.org/10.1186/s13321-019-0335-x","title":"rBAN: retro-biosynthetic analysis of nonribosomal peptides","display_name":"rBAN: retro-biosynthetic analysis of nonribosomal peptides","publication_year":2019,"publication_date":"2019-02-08","ids":{"openalex":"https://openalex.org/W2918756535","doi":"https://doi.org/10.1186/s13321-019-0335-x","mag":"2918756535","pmid":"https://pubmed.ncbi.nlm.nih.gov/30737579"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-019-0335-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-019-0335-x","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-019-0335-x","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-019-0335-x","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067495057","display_name":"Emma Ricart","orcid":"https://orcid.org/0000-0001-9086-7051"},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Emma Ricart","raw_affiliation_strings":["Computer Science Department, University of Geneva, Geneva, Switzerland. Emma.Ricart@sib.swiss","Proteome Informatics Group, SIB Swiss Institute of Bioinformatics, CMU, Rue Michel-Servet 1, 1211, Geneva, Switzerland. Emma.Ricart@sib.swiss","Proteome Informatics Group, SIB Swiss Institute of Bioinformatics, CMU, Rue Michel-Servet 1, 1211, Geneva, Switzerland"],"affiliations":[{"raw_affiliation_string":"Computer Science Department, University of Geneva, Geneva, Switzerland. Emma.Ricart@sib.swiss","institution_ids":["https://openalex.org/I114457229"]},{"raw_affiliation_string":"Proteome Informatics Group, SIB Swiss Institute of Bioinformatics, CMU, Rue Michel-Servet 1, 1211, Geneva, Switzerland. Emma.Ricart@sib.swiss","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Proteome Informatics Group, SIB Swiss Institute of Bioinformatics, CMU, Rue Michel-Servet 1, 1211, Geneva, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088172788","display_name":"Val\u00e9rie Lecl\u00e8re","orcid":"https://orcid.org/0000-0003-2463-5361"},"institutions":[{"id":"https://openalex.org/I2279609970","display_name":"Universit\u00e9 de Lille","ror":"https://ror.org/02kzqn938","country_code":"FR","type":"education","lineage":["https://openalex.org/I2279609970"]},{"id":"https://openalex.org/I4210091574","display_name":"Institut Charles Viollette","ror":"https://ror.org/0018c4h73","country_code":"FR","type":"facility","lineage":["https://openalex.org/I2279609970","https://openalex.org/I2802487185","https://openalex.org/I4210091574","https://openalex.org/I4210116330","https://openalex.org/I44563897"]},{"id":"https://openalex.org/I44563897","display_name":"Universit\u00e9 d'Artois","ror":"https://ror.org/053x9s498","country_code":"FR","type":"education","lineage":["https://openalex.org/I44563897"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Val\u00e9rie Lecl\u00e8re","raw_affiliation_strings":["EA 7394-ICV- Institut Charles Viollette, University of Lille, INRA, ISA, University of Artois, Univ. Littoral C\u00f4te d'Opale, 59000, Lille, France","EA 7394-ICV- Institut Charles Viollette, University of Lille, INRA, ISA, University of Artois, Univ. Littoral C\u00f4te d\u2019Opale, 59000, Lille, France"],"affiliations":[{"raw_affiliation_string":"EA 7394-ICV- Institut Charles Viollette, University of Lille, INRA, ISA, University of Artois, Univ. Littoral C\u00f4te d'Opale, 59000, Lille, France","institution_ids":["https://openalex.org/I4210091574"]},{"raw_affiliation_string":"EA 7394-ICV- Institut Charles Viollette, University of Lille, INRA, ISA, University of Artois, Univ. Littoral C\u00f4te d\u2019Opale, 59000, Lille, France","institution_ids":["https://openalex.org/I4210091574","https://openalex.org/I44563897","https://openalex.org/I2279609970"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064748607","display_name":"Areski Flissi","orcid":"https://orcid.org/0009-0004-4309-2803"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2279609970","display_name":"Universit\u00e9 de Lille","ror":"https://ror.org/02kzqn938","country_code":"FR","type":"education","lineage":["https://openalex.org/I2279609970"]},{"id":"https://openalex.org/I4210115519","display_name":"Centre de Recherche en Informatique","ror":"https://ror.org/020cdve92","country_code":"FR","type":"facility","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I4210091621","https://openalex.org/I4210115519","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I4210138412","display_name":"Centre Inria de l'Universit\u00e9 de Lille","ror":"https://ror.org/04eej9726","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210138412"]},{"id":"https://openalex.org/I7454413","display_name":"\u00c9cole Centrale de Lille","ror":"https://ror.org/01x441g73","country_code":"FR","type":"education","lineage":["https://openalex.org/I7454413"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Areski Flissi","raw_affiliation_strings":["Bonsai Team, Inria-Lille Nord Europe, 9655, Villeneuve d'Ascq Cedex, France","UMR 9189- CRIStAL- Centre de Recherche en Informatique Signal et Automatique de Lille, University of Lille, CNRS, Centrale Lille, 59000, Lille, France"],"affiliations":[{"raw_affiliation_string":"Bonsai Team, Inria-Lille Nord Europe, 9655, Villeneuve d'Ascq Cedex, France","institution_ids":["https://openalex.org/I4210138412"]},{"raw_affiliation_string":"UMR 9189- CRIStAL- Centre de Recherche en Informatique Signal et Automatique de Lille, University of Lille, CNRS, Centrale Lille, 59000, Lille, France","institution_ids":["https://openalex.org/I2279609970","https://openalex.org/I7454413","https://openalex.org/I1294671590","https://openalex.org/I4210115519"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112488644","display_name":"Markus Mueller","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Markus Mueller","raw_affiliation_strings":["Vital-IT Group, SIB Swiss Institute of Bioinformatics, Amphipole Building, Quartier Sorge, 1015, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Vital-IT Group, SIB Swiss Institute of Bioinformatics, Amphipole Building, Quartier Sorge, 1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024994641","display_name":"Maude Pupin","orcid":"https://orcid.org/0000-0003-3197-0715"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2279609970","display_name":"Universit\u00e9 de Lille","ror":"https://ror.org/02kzqn938","country_code":"FR","type":"education","lineage":["https://openalex.org/I2279609970"]},{"id":"https://openalex.org/I4210115519","display_name":"Centre de Recherche en Informatique","ror":"https://ror.org/020cdve92","country_code":"FR","type":"facility","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I4210091621","https://openalex.org/I4210115519","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I4210138412","display_name":"Centre Inria de l'Universit\u00e9 de Lille","ror":"https://ror.org/04eej9726","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210138412"]},{"id":"https://openalex.org/I7454413","display_name":"\u00c9cole Centrale de Lille","ror":"https://ror.org/01x441g73","country_code":"FR","type":"education","lineage":["https://openalex.org/I7454413"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Maude Pupin","raw_affiliation_strings":["Bonsai Team, Inria-Lille Nord Europe, 9655, Villeneuve d'Ascq Cedex, France","UMR 9189- CRIStAL- Centre de Recherche en Informatique Signal et Automatique de Lille, University of Lille, CNRS, Centrale Lille, 59000, Lille, France"],"affiliations":[{"raw_affiliation_string":"Bonsai Team, Inria-Lille Nord Europe, 9655, Villeneuve d'Ascq Cedex, France","institution_ids":["https://openalex.org/I4210138412"]},{"raw_affiliation_string":"UMR 9189- CRIStAL- Centre de Recherche en Informatique Signal et Automatique de Lille, University of Lille, CNRS, Centrale Lille, 59000, Lille, France","institution_ids":["https://openalex.org/I2279609970","https://openalex.org/I7454413","https://openalex.org/I1294671590","https://openalex.org/I4210115519"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037107254","display_name":"Fr\u00e9d\u00e9rique Lisacek","orcid":"https://orcid.org/0000-0002-0948-4537"},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Fr\u00e9d\u00e9rique Lisacek","raw_affiliation_strings":["Computer Science Department, University of Geneva, Geneva, Switzerland","Proteome Informatics Group, SIB Swiss Institute of Bioinformatics, CMU, Rue Michel-Servet 1, 1211, Geneva, Switzerland","Section of Biology, University of Geneva, Geneva, Switzerland"],"affiliations":[{"raw_affiliation_string":"Computer Science Department, University of Geneva, Geneva, Switzerland","institution_ids":["https://openalex.org/I114457229"]},{"raw_affiliation_string":"Proteome Informatics Group, SIB Swiss Institute of Bioinformatics, CMU, Rue Michel-Servet 1, 1211, Geneva, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Section of Biology, University of Geneva, Geneva, Switzerland","institution_ids":["https://openalex.org/I114457229"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5067495057"],"corresponding_institution_ids":["https://openalex.org/I114457229","https://openalex.org/I12708293"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":3.6019,"has_fulltext":true,"cited_by_count":31,"citation_normalized_percentile":{"value":0.92327022,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"11","issue":"1","first_page":"13","last_page":"13"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11340","display_name":"Marine Sponges and Natural Products","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/1305","display_name":"Biotechnology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11882","display_name":"Plant biochemistry and biosynthesis","score":0.982699990272522,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nonribosomal-peptide","display_name":"Nonribosomal peptide","score":0.6782816052436829},{"id":"https://openalex.org/keywords/pubchem","display_name":"PubChem","score":0.6037867069244385},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6029616594314575},{"id":"https://openalex.org/keywords/cheminformatics","display_name":"Cheminformatics","score":0.525800883769989},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.49437880516052246},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.474784791469574},{"id":"https://openalex.org/keywords/monomer","display_name":"Monomer","score":0.42407166957855225},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.4179573655128479},{"id":"https://openalex.org/keywords/biosynthesis","display_name":"Biosynthesis","score":0.3804495930671692},{"id":"https://openalex.org/keywords/combinatorial-chemistry","display_name":"Combinatorial chemistry","score":0.3523508608341217},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.24445897340774536},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.22540497779846191},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17361724376678467},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13308587670326233}],"concepts":[{"id":"https://openalex.org/C2777379556","wikidata":"https://www.wikidata.org/wiki/Q1443801","display_name":"Nonribosomal peptide","level":4,"score":0.6782816052436829},{"id":"https://openalex.org/C158180186","wikidata":"https://www.wikidata.org/wiki/Q278487","display_name":"PubChem","level":2,"score":0.6037867069244385},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6029616594314575},{"id":"https://openalex.org/C68762167","wikidata":"https://www.wikidata.org/wiki/Q910164","display_name":"Cheminformatics","level":2,"score":0.525800883769989},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.49437880516052246},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.474784791469574},{"id":"https://openalex.org/C166940927","wikidata":"https://www.wikidata.org/wiki/Q178827","display_name":"Monomer","level":3,"score":0.42407166957855225},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.4179573655128479},{"id":"https://openalex.org/C553450214","wikidata":"https://www.wikidata.org/wiki/Q851162","display_name":"Biosynthesis","level":3,"score":0.3804495930671692},{"id":"https://openalex.org/C21951064","wikidata":"https://www.wikidata.org/wiki/Q899212","display_name":"Combinatorial chemistry","level":1,"score":0.3523508608341217},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.24445897340774536},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.22540497779846191},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17361724376678467},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13308587670326233},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C521977710","wikidata":"https://www.wikidata.org/wiki/Q81163","display_name":"Polymer","level":2,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1186/s13321-019-0335-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-019-0335-x","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-019-0335-x","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:30737579","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30737579","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:HAL:hal-02167433v1","is_oa":true,"landing_page_url":"https://hal.science/hal-02167433","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, 2019, 11 (1), pp.1-14. &#x27E8;10.1186/s13321-019-0335-x&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:doaj.org/article:68bf17507c2042f2bfc9597408bae0d7","is_oa":true,"landing_page_url":"https://doaj.org/article/68bf17507c2042f2bfc9597408bae0d7","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, Vol 11, Iss 1, Pp 1-14 (2019)","raw_type":"article"},{"id":"pmh:oai:lilloa.univ-lille.fr:20.500.12210/21743","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.12210/21743","pdf_url":null,"source":{"id":"https://openalex.org/S4306402203","display_name":"LillOA (Universit\u00e9 de Lille (University Of Lille))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210123514","host_organization_name":"Centre d'Etudes en Civilisations, Langues et Litt\u00e9ratures Etrang\u00e8res","host_organization_lineage":["https://openalex.org/I4210123514"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6689883","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6689883","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13321-019-0335-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-019-0335-x","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-019-0335-x","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320331322","display_name":"Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45"},{"id":"https://openalex.org/F4320337753","display_name":"Interreg","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2918756535.pdf","grobid_xml":"https://content.openalex.org/works/W2918756535.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W1893791156","https://openalex.org/W1937222985","https://openalex.org/W1964731578","https://openalex.org/W1975147762","https://openalex.org/W1978609583","https://openalex.org/W1983817726","https://openalex.org/W1991286793","https://openalex.org/W1998997530","https://openalex.org/W2005650824","https://openalex.org/W2010687957","https://openalex.org/W2011700260","https://openalex.org/W2013964846","https://openalex.org/W2018992388","https://openalex.org/W2022476850","https://openalex.org/W2027526396","https://openalex.org/W2038949613","https://openalex.org/W2041603354","https://openalex.org/W2046200777","https://openalex.org/W2052959678","https://openalex.org/W2056540548","https://openalex.org/W2059823360","https://openalex.org/W2076066113","https://openalex.org/W2083224653","https://openalex.org/W2089106345","https://openalex.org/W2101843154","https://openalex.org/W2130479394","https://openalex.org/W2135639274","https://openalex.org/W2152968740","https://openalex.org/W2167991274","https://openalex.org/W2170292320","https://openalex.org/W2177317049","https://openalex.org/W2207769928","https://openalex.org/W2256742438","https://openalex.org/W2529113939","https://openalex.org/W2566724977","https://openalex.org/W2611907395","https://openalex.org/W2616593173","https://openalex.org/W2765371419","https://openalex.org/W2883583215","https://openalex.org/W2951945067","https://openalex.org/W4255720064"],"related_works":["https://openalex.org/W2460225311","https://openalex.org/W1964976889","https://openalex.org/W3012362343","https://openalex.org/W3018299999","https://openalex.org/W3009346573","https://openalex.org/W2474258807","https://openalex.org/W3018504856","https://openalex.org/W2079781933","https://openalex.org/W3011653581","https://openalex.org/W1862448690"],"abstract_inverted_index":{"Proteinogenic":[0],"and":[1,20,30,117,155,187,211,226,243],"non-proteinogenic":[2],"amino":[3],"acids,":[4],"fatty":[5],"acids":[6],"or":[7],"glycans":[8],"are":[9,137],"some":[10],"of":[11,16,32,40,49,70,82,95,113,125,168,196,199,207,214,228],"the":[12,27,37,68,92,109,119,123,145,152,166,178,181,194,197,200,212,220,239],"main":[13],"building":[14],"blocks":[15],"nonribsosomal":[17],"peptides":[18],"(NRPs)":[19],"as":[21,58],"such":[22,57],"may":[23],"give":[24],"insight":[25],"into":[26],"origin,":[28],"biosynthesis":[29],"bioactivities":[31],"their":[33,98],"constitutive":[34],"peptides.":[35],"Hence,":[36],"structural":[38,71],"representation":[39],"NRPs":[41,56,96],"using":[42],"monomers":[43,124,131,217],"provides":[44],"a":[45,85,114,140,163,204],"biologically":[46],"interesting":[47],"skeleton":[48],"these":[50],"secondary":[51],"metabolites.":[52],"Databases":[53],"dedicated":[54],"to":[55,66,90,150,176],"Norine,":[59,136,203],"already":[60],"integrate":[61],"monomer-based":[62],"annotations":[63],"in":[64,101,135,139,162,171,185,202,219,232],"order":[65],"facilitate":[67],"development":[69],"analysis":[72,81],"tools.":[73],"In":[74],"this":[75],"paper,":[76],"we":[77],"present":[78],"rBAN":[79,159,229],"(retro-biosynthetic":[80],"nonribosomal":[83],"peptides),":[84],"new":[86,157,216],"computational":[87],"tool":[88],"designed":[89],"predict":[91],"monomeric":[93,182],"graph":[94],"from":[97,148],"atomic":[99],"structure":[100,116],"SMILES":[102,209],"format.":[103],"This":[104],"prediction":[105],"is":[106],"achieved":[107],"through":[108],"\"in":[110],"silico\"":[111],"fragmentation":[112],"chemical":[115],"matching":[118],"resulting":[120],"fragments":[121],"against":[122,235],"Norine":[126,169,186],"for":[127,165],"identification.":[128],"Structures":[129],"containing":[130],"not":[132],"yet":[133],"recorded":[134],"processed":[138],"\"discovery":[141],"mode\"":[142],"that":[143],"uses":[144],"RESTful":[146],"service":[147],"PubChem":[149],"search":[151],"unidentified":[153],"substructures":[154],"suggest":[156],"monomers.":[158],"was":[160,174],"integrated":[161],"pipeline":[164],"curation":[167],"data":[170,210],"which":[172],"it":[173,234],"used":[175],"check":[177],"correspondence":[179],"between":[180],"graphs":[183],"annotated":[184],"SMILES-predicted":[188],"graphs.":[189],"The":[190,223],"process":[191],"concluded":[192],"with":[193,238],"validation":[195],"97.26%":[198],"records":[201],"two-fold":[205],"extension":[206],"its":[208],"introduction":[213],"11":[215],"suggested":[218],"discovery":[221],"mode.":[222],"accuracy,":[224],"robustness":[225],"high-performance":[227],"were":[230],"demonstrated":[231],"benchmarking":[233],"other":[236],"tools":[237],"same":[240],"functionality:":[241],"Smiles2Monomers":[242],"GRAPE.":[244]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
