{"id":"https://openalex.org/W2345631520","doi":"https://doi.org/10.1186/s13321-016-0134-6","title":"\u201cAsk Ern\u00f6\u201d: a self-learning tool for assignment and prediction of nuclear magnetic resonance spectra","display_name":"\u201cAsk Ern\u00f6\u201d: a self-learning tool for assignment and prediction of nuclear magnetic resonance spectra","publication_year":2016,"publication_date":"2016-05-05","ids":{"openalex":"https://openalex.org/W2345631520","doi":"https://doi.org/10.1186/s13321-016-0134-6","mag":"2345631520","pmid":"https://pubmed.ncbi.nlm.nih.gov/27158267"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-016-0134-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-016-0134-6","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-016-0134-6","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-016-0134-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051206840","display_name":"A. Castillo","orcid":"https://orcid.org/0000-0002-9887-3293"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]},{"id":"https://openalex.org/I91732220","display_name":"Universidad del Valle","ror":"https://ror.org/00jb9vg53","country_code":"CO","type":"education","lineage":["https://openalex.org/I91732220"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Andr\u00e9s M. Castillo","raw_affiliation_strings":["Facultad de Ingenier\u00eda, Universidad Nacional de Colombia, Bogot\u00e1 D.C., Colombia ; Chemistry Department, Universidad del Valle, Cali, Colombia","Chemistry Department, Universidad del Valle, Cali, Colombia","Facultad de Ingenier\u00eda, Universidad Nacional de Colombia, Bogot\u00e1 D.C., Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Facultad de Ingenier\u00eda, Universidad Nacional de Colombia, Bogot\u00e1 D.C., Colombia ; Chemistry Department, Universidad del Valle, Cali, Colombia","institution_ids":["https://openalex.org/I36243813","https://openalex.org/I91732220"]},{"raw_affiliation_string":"Chemistry Department, Universidad del Valle, Cali, Colombia","institution_ids":["https://openalex.org/I91732220"]},{"raw_affiliation_string":"Facultad de Ingenier\u00eda, Universidad Nacional de Colombia, Bogot\u00e1 D.C., Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020312971","display_name":"Andr\u00e9s Bernal","orcid":"https://orcid.org/0000-0003-1668-7225"},"institutions":[{"id":"https://openalex.org/I91732220","display_name":"Universidad del Valle","ror":"https://ror.org/00jb9vg53","country_code":"CO","type":"education","lineage":["https://openalex.org/I91732220"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Andr\u00e9s Bernal","raw_affiliation_strings":["Chemistry Department, Universidad del Valle, Cali, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry Department, Universidad del Valle, Cali, Colombia","institution_ids":["https://openalex.org/I91732220"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055096049","display_name":"Reiner Dieden","orcid":"https://orcid.org/0000-0001-5116-1742"},"institutions":[{"id":"https://openalex.org/I869874271","display_name":"Symrise (Germany)","ror":"https://ror.org/023yqa482","country_code":"DE","type":"company","lineage":["https://openalex.org/I869874271"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Reiner Dieden","raw_affiliation_strings":["Analytical Research Center, R&T - Flavors Division EAME, Symrise, Holzminden, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Analytical Research Center, R&T - Flavors Division EAME, Symrise, Holzminden, Germany","institution_ids":["https://openalex.org/I869874271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064912268","display_name":"Luc Patiny","orcid":"https://orcid.org/0000-0002-4943-2643"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Luc Patiny","raw_affiliation_strings":["Institute of Chemical Sciences and Engineering, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne, 1015 Lausanne, Switzerland","Institute of Chemical Sciences and Engineering, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne, 1015, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Chemical Sciences and Engineering, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Institute of Chemical Sciences and Engineering, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne, 1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5036893096","display_name":"Julien Wist","orcid":"https://orcid.org/0000-0002-3416-2572"},"institutions":[{"id":"https://openalex.org/I91732220","display_name":"Universidad del Valle","ror":"https://ror.org/00jb9vg53","country_code":"CO","type":"education","lineage":["https://openalex.org/I91732220"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Julien Wist","raw_affiliation_strings":["Chemistry Department, Universidad del Valle, Cali, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry Department, Universidad del Valle, Cali, Colombia","institution_ids":["https://openalex.org/I91732220"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5064912268"],"corresponding_institution_ids":["https://openalex.org/I5124864"],"apc_list":{"value":2190,"currency":"USD","value_usd":2190},"apc_paid":{"value":2190,"currency":"USD","value_usd":2190},"fwci":0.8132,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.71850976,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"8","issue":"1","first_page":"26","last_page":"26"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12748","display_name":"Molecular spectroscopy and chirality","score":0.37459999322891235,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12748","display_name":"Molecular spectroscopy and chirality","score":0.37459999322891235,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.27630001306533813,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.10419999808073044,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ask-price","display_name":"Ask price","score":0.8414517045021057},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5674764513969421},{"id":"https://openalex.org/keywords/nuclear-magnetic-resonance","display_name":"Nuclear magnetic resonance","score":0.3885996639728546},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3681957721710205},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.1898227334022522}],"concepts":[{"id":"https://openalex.org/C90329073","wikidata":"https://www.wikidata.org/wiki/Q914232","display_name":"Ask price","level":2,"score":0.8414517045021057},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5674764513969421},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.3885996639728546},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3681957721710205},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.1898227334022522},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13321-016-0134-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-016-0134-6","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-016-0134-6","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:27158267","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27158267","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:infoscience.epfl.ch:219700","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/219700","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4858875","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4858875","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13321-016-0134-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-016-0134-6","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-016-0134-6","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320309955","display_name":"Departamento Administrativo de Ciencia, Tecnolog\u00eda e Innovaci\u00f3n (COLCIENCIAS)","ror":"https://ror.org/048jthh02"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2345631520.pdf","grobid_xml":"https://content.openalex.org/works/W2345631520.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1512208174","https://openalex.org/W1563618054","https://openalex.org/W1579551049","https://openalex.org/W1967658998","https://openalex.org/W1983219509","https://openalex.org/W1991654661","https://openalex.org/W1999440281","https://openalex.org/W2025595362","https://openalex.org/W2035066478","https://openalex.org/W2063783366","https://openalex.org/W2067801122","https://openalex.org/W2074054277","https://openalex.org/W2093820574","https://openalex.org/W2103297848","https://openalex.org/W2132119743","https://openalex.org/W2213929272","https://openalex.org/W2242788071","https://openalex.org/W2951383436"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2168627904","https://openalex.org/W2515552481","https://openalex.org/W1570348318","https://openalex.org/W2015444353","https://openalex.org/W3013494979","https://openalex.org/W156769215","https://openalex.org/W4308101915"],"abstract_inverted_index":{"BACKGROUND:":[0],"We":[1],"present":[2],"\"Ask":[3],"Ern\u00f6\",":[4],"a":[5,34,94,97,115,167,215],"self-learning":[6],"system":[7,95,207],"for":[8,202],"the":[9,27,43,49,53,58,108,152,200,209,223,233,239],"automatic":[10,28,183],"analysis":[11,185],"of":[12,16,26,36,57,99,110,118,145,151,170],"NMR":[13,184],"spectra,":[14,105],"consisting":[15],"integrated":[17],"chemical":[18,44,111,154],"shift":[19,45,112],"assignment":[20,29,59,240],"and":[21,32,74,102,106,189,244],"prediction":[22,136,168,234],"tools.":[23],"The":[24],"output":[25],"component":[30],"initializes":[31],"improves":[33,190],"database":[35],"assigned":[37,121,124,204],"protons":[38],"that":[39,186],"is":[40],"used":[41],"by":[42,52,91,138],"predictor.":[46],"In":[47],"turn,":[48],"predictions":[50,113],"provided":[51,192],"latter":[54],"facilitate":[55],"improvement":[56],"process.":[60],"Iteration":[61],"on":[62,114],"these":[63],"steps":[64],"allows":[65],"Ask":[66,129,176],"Ern\u00f6":[67,130,177],"to":[68,72,133,182,211,220],"improve":[69,238],"its":[70,135],"ability":[71,241],"assign":[73],"predict":[75],"spectra":[76],"without":[77],"any":[78],"prior":[79],"knowledge":[80],"or":[81],"assistance":[82],"from":[83],"human":[84],"experts.":[85],"RESULTS:":[86],"This":[87,206],"concept":[88],"was":[89,131],"tested":[90],"training":[92],"such":[93],"with":[96,193,222],"dataset":[98],"2341":[100],"molecules":[101,122],"their":[103],"(1)H-NMR":[104],"evaluating":[107],"accuracy":[109],"test":[116,153],"set":[117],"298":[119],"partially":[120],"(2007":[123],"protons).":[125],"After":[126],"10":[127],"iterations,":[128],"able":[132,219],"decrease":[134],"error":[137,144,169],"17":[139],"%,":[140],"reaching":[141],"an":[142,179],"average":[143],"0.265":[146],"ppm.":[147,174],"Over":[148],"60":[149],"%":[150,164],"shifts":[155],"were":[156],"predicted":[157],"within":[158],"0.2":[159],"ppm,":[160],"while":[161],"only":[162],"5":[163],"still":[165],"presented":[166],"more":[171],"than":[172],"1":[173],"CONCLUSIONS:":[175],"introduces":[178],"innovative":[180],"approach":[181],"constantly":[187],"learns":[188],"when":[191],"new":[194],"data.":[195],"Furthermore,":[196],"it":[197],"completely":[198],"avoids":[199],"need":[201],"manually":[203],"spectra.":[205],"has":[208],"potential":[210],"be":[212],"turned":[213],"into":[214],"fully":[216],"autonomous":[217],"tool":[218],"compete":[221],"best":[224],"alternatives":[225],"currently":[226],"available.Graphical":[227],"abstractSelf-learning":[228],"loop.":[229],"Any":[230],"progress":[231],"in":[232],"(forward":[235],"problem)":[236,243],"will":[237],"(reverse":[242],"vice":[245],"versa.":[246]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
