{"id":"https://openalex.org/W2280552799","doi":"https://doi.org/10.1186/s13321-016-0112-z","title":"vSDC: a method to improve early recognition in virtual screening when limited experimental resources are available","display_name":"vSDC: a method to improve early recognition in virtual screening when limited experimental resources are available","publication_year":2016,"publication_date":"2016-01-18","ids":{"openalex":"https://openalex.org/W2280552799","doi":"https://doi.org/10.1186/s13321-016-0112-z","mag":"2280552799","pmid":"https://pubmed.ncbi.nlm.nih.gov/26807156"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-016-0112-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-016-0112-z","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-016-0112-z","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-016-0112-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032862777","display_name":"Ludovic Chaput","orcid":null},"institutions":[{"id":"https://openalex.org/I102197404","display_name":"Universit\u00e9 Paris-Sud","ror":"https://ror.org/028rypz17","country_code":"FR","type":"education","lineage":["https://openalex.org/I102197404"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I2746051580","display_name":"Universit\u00e9 Paris Sciences et Lettres","ror":"https://ror.org/013cjyk83","country_code":"FR","type":"education","lineage":["https://openalex.org/I2746051580"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ludovic Chaput","raw_affiliation_strings":["Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I102197404","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France","institution_ids":["https://openalex.org/I2746051580","https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106686005","display_name":"Juan Martinez\u2010Sanz","orcid":null},"institutions":[{"id":"https://openalex.org/I102197404","display_name":"Universit\u00e9 Paris-Sud","ror":"https://ror.org/028rypz17","country_code":"FR","type":"education","lineage":["https://openalex.org/I102197404"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I2746051580","display_name":"Universit\u00e9 Paris Sciences et Lettres","ror":"https://ror.org/013cjyk83","country_code":"FR","type":"education","lineage":["https://openalex.org/I2746051580"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Juan Martinez-Sanz","raw_affiliation_strings":["Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I102197404","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France","institution_ids":["https://openalex.org/I2746051580","https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002543481","display_name":"\u00c9ric Quiniou","orcid":"https://orcid.org/0000-0002-2721-6755"},"institutions":[{"id":"https://openalex.org/I102197404","display_name":"Universit\u00e9 Paris-Sud","ror":"https://ror.org/028rypz17","country_code":"FR","type":"education","lineage":["https://openalex.org/I102197404"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I2746051580","display_name":"Universit\u00e9 Paris Sciences et Lettres","ror":"https://ror.org/013cjyk83","country_code":"FR","type":"education","lineage":["https://openalex.org/I2746051580"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Eric Quiniou","raw_affiliation_strings":["Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I102197404","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France","institution_ids":["https://openalex.org/I2746051580","https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009837778","display_name":"Pascal Rigolet","orcid":"https://orcid.org/0000-0001-6868-4953"},"institutions":[{"id":"https://openalex.org/I102197404","display_name":"Universit\u00e9 Paris-Sud","ror":"https://ror.org/028rypz17","country_code":"FR","type":"education","lineage":["https://openalex.org/I102197404"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I2746051580","display_name":"Universit\u00e9 Paris Sciences et Lettres","ror":"https://ror.org/013cjyk83","country_code":"FR","type":"education","lineage":["https://openalex.org/I2746051580"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pascal Rigolet","raw_affiliation_strings":["Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I102197404","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France","institution_ids":["https://openalex.org/I2746051580","https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076063332","display_name":"Nicolas Saettel","orcid":"https://orcid.org/0000-0002-0599-9736"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I2746051580","display_name":"Universit\u00e9 Paris Sciences et Lettres","ror":"https://ror.org/013cjyk83","country_code":"FR","type":"education","lineage":["https://openalex.org/I2746051580"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Nicolas Saettel","raw_affiliation_strings":["Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France ; School of Pharmacy, University of Caen, Normandy, Boulevard Becquerel, Caen, 14032 France","Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France ; School of Pharmacy, University of Caen, Normandy, Boulevard Becquerel, Caen, 14032 France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I2746051580","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405, Orsay Cedex, France","institution_ids":["https://openalex.org/I2746051580","https://openalex.org/I80043"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000390428","display_name":"Liliane Mouawad","orcid":"https://orcid.org/0000-0002-7155-9712"},"institutions":[{"id":"https://openalex.org/I102197404","display_name":"Universit\u00e9 Paris-Sud","ror":"https://ror.org/028rypz17","country_code":"FR","type":"education","lineage":["https://openalex.org/I102197404"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Liliane Mouawad","raw_affiliation_strings":["Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","Paris-Sud University, Orsay, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry, Modelling and Imaging for Biology (CMIB), Centre de Recherche, Institut Curie-PSL Research University, B\u00e2timent 112, Centre Universitaire, 91405 Orsay Cedex, France ; Paris-Sud University, Orsay, France ; Inserm, U1196, Orsay, France ; CNRS, UMR 9187, Orsay, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I102197404","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Paris-Sud University, Orsay, France","institution_ids":["https://openalex.org/I102197404"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5000390428"],"corresponding_institution_ids":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I154526488"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":9.0114,"has_fulltext":true,"cited_by_count":70,"citation_normalized_percentile":{"value":0.97882339,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"8","issue":"1","first_page":"1","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9463000297546387,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9463000297546387,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.011900000274181366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.006000000052154064,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.91629958152771},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7266605496406555},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.6723071336746216},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.5297563672065735},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.502919614315033},{"id":"https://openalex.org/keywords/divergence","display_name":"Divergence (linguistics)","score":0.44109290838241577},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.39223089814186096},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.35107141733169556},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.19574686884880066}],"concepts":[{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.91629958152771},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7266605496406555},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.6723071336746216},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.5297563672065735},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.502919614315033},{"id":"https://openalex.org/C207390915","wikidata":"https://www.wikidata.org/wiki/Q1230525","display_name":"Divergence (linguistics)","level":2,"score":0.44109290838241577},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.39223089814186096},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35107141733169556},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.19574686884880066},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13321-016-0112-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-016-0112-z","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-016-0112-z","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:26807156","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26807156","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:HAL:hal-04486336v1","is_oa":false,"landing_page_url":"https://hal.science/hal-04486336","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Cheminformatics, 2016, 8 (1), pp.1. &#x27E8;10.1186/s13321-016-0112-z&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:pubmedcentral.nih.gov:4722699","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4722699","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13321-016-0112-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-016-0112-z","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-016-0112-z","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.5,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G3938339082","display_name":null,"funder_award_id":"ANR-11-CARN-008-01","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6055511165","display_name":null,"funder_award_id":"ANR-11-CARN-008-01","funder_id":"https://openalex.org/F4320323810","funder_display_name":"Association Instituts Carnot"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320323810","display_name":"Association Instituts Carnot","ror":"https://ror.org/0452y0518"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2280552799.pdf","grobid_xml":"https://content.openalex.org/works/W2280552799.grobid-xml"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W1968319881","https://openalex.org/W1969939692","https://openalex.org/W1973191530","https://openalex.org/W1974809008","https://openalex.org/W1975107946","https://openalex.org/W1980949045","https://openalex.org/W1984981677","https://openalex.org/W1986288809","https://openalex.org/W1988111902","https://openalex.org/W1988437166","https://openalex.org/W2002733813","https://openalex.org/W2002766454","https://openalex.org/W2008005113","https://openalex.org/W2009423060","https://openalex.org/W2013695178","https://openalex.org/W2014276094","https://openalex.org/W2014952106","https://openalex.org/W2015080758","https://openalex.org/W2030819680","https://openalex.org/W2036927874","https://openalex.org/W2040110902","https://openalex.org/W2042110087","https://openalex.org/W2043950247","https://openalex.org/W2050456292","https://openalex.org/W2052666656","https://openalex.org/W2055410316","https://openalex.org/W2061734959","https://openalex.org/W2066270106","https://openalex.org/W2071717945","https://openalex.org/W2075673943","https://openalex.org/W2080169144","https://openalex.org/W2085564033","https://openalex.org/W2093313511","https://openalex.org/W2093876128","https://openalex.org/W2095501702","https://openalex.org/W2102377211","https://openalex.org/W2114779636","https://openalex.org/W2120898782","https://openalex.org/W2121895929","https://openalex.org/W2127760066","https://openalex.org/W2144172560","https://openalex.org/W2159348270","https://openalex.org/W2172196619","https://openalex.org/W2582743722","https://openalex.org/W4233502188"],"related_works":["https://openalex.org/W4238897586","https://openalex.org/W435179959","https://openalex.org/W2619091065","https://openalex.org/W2059640416","https://openalex.org/W1490753184","https://openalex.org/W2284465472","https://openalex.org/W2059230675","https://openalex.org/W2376003823","https://openalex.org/W2594726310","https://openalex.org/W2355193834"],"abstract_inverted_index":{"BACKGROUND:":[0],"In":[1,227,350],"drug":[2,269],"design,":[3,270],"one":[4],"may":[5],"be":[6,307],"confronted":[7],"to":[8,172,200,292,318,443,453],"the":[9,55,72,87,113,121,129,132,137,149,161,201,205,217,225,236,246,258,264,280,295,324,334,337,363,367,374,385,395,400,415,445,448],"problem":[10],"of":[11,54,62,82,96,112,131,148,151,164,192,204,216,224,233,235,248,254,304,328,336,340,366,373,377,384,394,399,410,414,447],"finding":[12,211,411],"hits":[13,174,213,249,378],"for":[14,16,175,221,271,421,425,429,434],"targets":[15,179,365],"which":[17,115],"no":[18],"small":[19,186],"inhibiting":[20],"molecules":[21,187,232,261,391],"are":[22,28,84,288],"known":[23],"and":[24,57,105,127,142,184,275,356,360,382,431,452],"only":[25,66,70,182,230,300,389],"low-throughput":[26],"experiments":[27,305],"available":[29],"(like":[30],"ITC":[31],"or":[32],"NMR":[33],"studies),":[34],"two":[35,176],"common":[36],"difficulties":[37],"encountered":[38],"in":[39,86,119,210,245],"a":[40,45,59,79,110,117,189,272,276,301],"typical":[41],"academic":[42],"setting.":[43],"Using":[44],"virtual":[46,133,156,285,347,449],"screening":[47,157,286,348,450],"strategy":[48],"like":[49],"docking":[50,266],"can":[51,306],"alleviate":[52],"some":[53],"problems":[56],"save":[58],"considerable":[60],"amount":[61],"time":[63],"by":[64,180,263],"selecting":[65],"top-ranking":[67],"molecules,":[68],"but":[69],"if":[71],"method":[73,315],"is":[74],"very":[75],"efficient,":[76],"i.e.":[77],"when":[78,198,229,299,388],"good":[80],"proportion":[81],"actives":[83],"found":[85,379],"1-10":[88],"%":[89,223,256,413,420,424,428,433],"best":[90],"ranked":[91],"molecules.":[92],"RESULTS:":[93],"The":[94,309],"use":[95],"several":[97,155],"programs":[98,220,287],"(in":[99],"our":[100],"study,":[101],"Gold,":[102,354,426],"Surflex,":[103,435],"FlexX":[104,355,430],"Glide":[106],"were":[107,240,358,403],"considered)":[108],"shows":[109],"divergence":[111,126],"results,":[114],"presents":[116],"difficulty":[118],"guiding":[120],"experiments.":[122],"To":[123],"overcome":[124,444],"this":[125,320,351],"increase":[128],"yield":[130],"screening,":[134],"we":[135],"created":[136],"standard":[138,162,338],"deviation":[139],"consensus":[140],"(SDC)":[141],"variable":[143,310],"SDC":[144,169],"(vSDC)":[145,314],"methods,":[146],"consisting":[147],"intersection":[150],"molecule":[152,330],"sets":[153],"from":[154,188,345,392],"programs,":[158,387],"based":[159],"on":[160,333,362],"deviations":[163,339],"their":[165,341],"ranking":[166,342],"distributions.":[167],"CONCLUSIONS:":[168],"allowed":[170],"us":[171],"find":[173],"new":[177],"protein":[178],"testing":[181],"9":[183],"11":[185],"chemical":[190,238,278,397],"library":[191],"circa":[193],"15,000":[194],"compounds.":[195],"Furthermore,":[196],"vSDC,":[197,439],"applied":[199],"102":[202,237,364,396],"proteins":[203],"DUD-E":[206,368,401],"benchmarking":[207],"database,":[208],"succeeded":[209],"more":[212],"than":[214],"any":[215],"four":[218,386],"isolated":[219],"13-60":[222],"targets.":[226],"addition,":[228],"10":[231,259,390],"each":[234,383,393],"libraries":[239,398],"considered,":[241],"vSDC":[242,325,381,407],"performed":[243],"better":[244],"number":[247,303],"found,":[250],"with":[251,283,380,438],"an":[252],"improvement":[253],"6-24":[255],"over":[257],"best-ranked":[260],"given":[262,273,277],"individual":[265],"programs.Graphical":[267],"abstractIn":[268],"target":[274],"library,":[279],"results":[281,451],"obtained":[282,344],"different":[284],"divergent.":[289],"So":[290],"how":[291],"rationally":[293],"guide":[294],"experimental":[296],"tests,":[297],"especially":[298],"few":[302],"made?":[308],"Standard":[311],"Deviation":[312],"Consensus":[313],"was":[316,408,441],"developed":[317],"answer":[319],"issue.":[321],"Left":[322],"panel":[323,371],"principle":[326],"consists":[327],"intersecting":[329],"sets,":[331],"chosen":[332],"basis":[335],"distributions,":[343],"various":[346],"programs.":[349],"study":[352],"Glide,":[353,422],"Surflex":[357],"used":[359],"tested":[361],"database.":[369],"Right":[370],"Comparison":[372],"average":[375],"percentage":[376],"database":[402],"considered.":[404],"On":[405],"average,":[406],"capable":[409],"38":[412],"findable":[416],"hits,":[417],"against":[418],"34":[419],"32":[423],"16":[427],"14":[432],"showing":[436],"that":[437],"it":[440],"possible":[442],"unpredictability":[446],"improve":[454],"them.":[455]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":14},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":2}],"updated_date":"2026-06-19T17:40:00.097472","created_date":"2025-10-10T00:00:00"}
