{"id":"https://openalex.org/W1519298624","doi":"https://doi.org/10.1186/s13321-015-0080-8","title":"SANCDB: a South African natural compound database","display_name":"SANCDB: a South African natural compound database","publication_year":2015,"publication_date":"2015-06-17","ids":{"openalex":"https://openalex.org/W1519298624","doi":"https://doi.org/10.1186/s13321-015-0080-8","mag":"1519298624","pmid":"https://pubmed.ncbi.nlm.nih.gov/26097510"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-015-0080-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-015-0080-8","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-015-0080-8","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-015-0080-8","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072732617","display_name":"Rowan Hatherley","orcid":null},"institutions":[{"id":"https://openalex.org/I203238179","display_name":"Rhodes University","ror":"https://ror.org/016sewp10","country_code":"ZA","type":"education","lineage":["https://openalex.org/I203238179"]}],"countries":["ZA"],"is_corresponding":true,"raw_author_name":"Rowan Hatherley","raw_affiliation_strings":["Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa","institution_ids":["https://openalex.org/I203238179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109100222","display_name":"David K. Brown","orcid":null},"institutions":[{"id":"https://openalex.org/I203238179","display_name":"Rhodes University","ror":"https://ror.org/016sewp10","country_code":"ZA","type":"education","lineage":["https://openalex.org/I203238179"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"David K Brown","raw_affiliation_strings":["Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa","institution_ids":["https://openalex.org/I203238179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004870074","display_name":"Thommas M. Musyoka","orcid":"https://orcid.org/0000-0001-8906-9482"},"institutions":[{"id":"https://openalex.org/I203238179","display_name":"Rhodes University","ror":"https://ror.org/016sewp10","country_code":"ZA","type":"education","lineage":["https://openalex.org/I203238179"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Thommas M Musyoka","raw_affiliation_strings":["Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa","institution_ids":["https://openalex.org/I203238179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086840058","display_name":"David L. Penkler","orcid":null},"institutions":[{"id":"https://openalex.org/I203238179","display_name":"Rhodes University","ror":"https://ror.org/016sewp10","country_code":"ZA","type":"education","lineage":["https://openalex.org/I203238179"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"David L Penkler","raw_affiliation_strings":["Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa","institution_ids":["https://openalex.org/I203238179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029314561","display_name":"Ngonidzashe Faya","orcid":"https://orcid.org/0000-0001-9595-0196"},"institutions":[{"id":"https://openalex.org/I203238179","display_name":"Rhodes University","ror":"https://ror.org/016sewp10","country_code":"ZA","type":"education","lineage":["https://openalex.org/I203238179"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Ngonidzashe Faya","raw_affiliation_strings":["Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa","institution_ids":["https://openalex.org/I203238179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068359842","display_name":"Kevin A. Lobb","orcid":"https://orcid.org/0000-0003-3023-0790"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kevin A Lobb","raw_affiliation_strings":["Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa ; Department of Chemistry, Rhodes University, Grahamstown, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa ; Department of Chemistry, Rhodes University, Grahamstown, South Africa","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084130869","display_name":"\u00d6zlem Ta\u015ftan Bishop","orcid":"https://orcid.org/0000-0001-6861-7849"},"institutions":[{"id":"https://openalex.org/I203238179","display_name":"Rhodes University","ror":"https://ror.org/016sewp10","country_code":"ZA","type":"education","lineage":["https://openalex.org/I203238179"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"\u00d6zlem Tastan Bishop","raw_affiliation_strings":["Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, Research Unit in Bioinformatics (RUBi), Rhodes University, Grahamstown, South Africa","institution_ids":["https://openalex.org/I203238179"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5072732617"],"corresponding_institution_ids":["https://openalex.org/I203238179"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":6.1775,"has_fulltext":true,"cited_by_count":121,"citation_normalized_percentile":{"value":0.9673954,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"7","issue":"1","first_page":"29","last_page":"29"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.5072000026702881,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.5072000026702881,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12748","display_name":"Molecular spectroscopy and chirality","score":0.061900001019239426,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12497","display_name":"Traditional and Medicinal Uses of Annonaceae","score":0.044599998742341995,"subfield":{"id":"https://openalex.org/subfields/1303","display_name":"Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6797695755958557},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6131395101547241},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.5558772087097168},{"id":"https://openalex.org/keywords/online-database","display_name":"Online database","score":0.5268686413764954},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5151097178459167}],"concepts":[{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6797695755958557},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6131395101547241},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5558772087097168},{"id":"https://openalex.org/C2777715827","wikidata":"https://www.wikidata.org/wiki/Q7094076","display_name":"Online database","level":2,"score":0.5268686413764954},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5151097178459167},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/s13321-015-0080-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-015-0080-8","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-015-0080-8","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:26097510","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26097510","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3434381","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4471313","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13321-015-0080-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-015-0080-8","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/s13321-015-0080-8","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4399999976158142,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G1798033164","display_name":null,"funder_award_id":"U41HG006941 to H3ABioNet","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1809968458","display_name":null,"funder_award_id":"93690","funder_id":"https://openalex.org/F4320320671","funder_display_name":"National Research Foundation"},{"id":"https://openalex.org/G4935981367","display_name":null,"funder_award_id":"U41HG006941","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8182939234","display_name":null,"funder_award_id":"79765","funder_id":"https://openalex.org/F4320320671","funder_display_name":"National Research Foundation"}],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320320683","display_name":"Rhodes University","ror":"https://ror.org/016sewp10"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320338403","display_name":"Common Fund","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1519298624.pdf","grobid_xml":"https://content.openalex.org/works/W1519298624.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W67146907","https://openalex.org/W1965694039","https://openalex.org/W1966456689","https://openalex.org/W1975494205","https://openalex.org/W1982728268","https://openalex.org/W1992716708","https://openalex.org/W1999118725","https://openalex.org/W2006587090","https://openalex.org/W2006607885","https://openalex.org/W2022950330","https://openalex.org/W2027482274","https://openalex.org/W2032574998","https://openalex.org/W2033588393","https://openalex.org/W2038160922","https://openalex.org/W2044076016","https://openalex.org/W2052236994","https://openalex.org/W2067960511","https://openalex.org/W2071551353","https://openalex.org/W2080370411","https://openalex.org/W2085398335","https://openalex.org/W2088629793","https://openalex.org/W2089710647","https://openalex.org/W2096541451","https://openalex.org/W2111581388","https://openalex.org/W2120869341","https://openalex.org/W2135732933","https://openalex.org/W2137052779","https://openalex.org/W2141474275","https://openalex.org/W2155590214","https://openalex.org/W2163305701","https://openalex.org/W2163995223","https://openalex.org/W2168775915","https://openalex.org/W2169678694","https://openalex.org/W2176516200","https://openalex.org/W2766092981","https://openalex.org/W2949511022","https://openalex.org/W4234672240"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W4243839507","https://openalex.org/W2113503643","https://openalex.org/W2048912770","https://openalex.org/W1764002470","https://openalex.org/W4234895487","https://openalex.org/W4310671729","https://openalex.org/W4235891116","https://openalex.org/W2314629917","https://openalex.org/W2291036642"],"abstract_inverted_index":{"BACKGROUND:":[0],"Natural":[1],"products":[2,81,223],"(NPs)":[3],"are":[4,14],"important":[5],"to":[6,23,96,104,110,127,147,170,196,220],"the":[7,97,128,134,139,155,161,176,209],"drug":[8,185],"discovery":[9,186],"process.":[10],"NP":[11,164],"research":[12,58,153,224],"efforts":[13],"expanding":[15],"world-wide":[16],"and":[17,72,89,102],"South":[18,53,61,181,226],"Africa":[19],"is":[20,46,69,92,100,159,190,229],"no":[21,48],"exception":[22],"this.":[24],"While":[25],"freely-accessible":[26],"small":[27],"molecule":[28],"databases,":[29],"containing":[30,75],"compounds":[31,109,149],"isolated":[32],"from":[33,84,132,150,201],"indigenous":[34],"sources,":[35],"have":[36],"been":[37],"established":[38],"in":[39,52,166,177,225],"a":[40,60,70,93,114,142,172,193,213,216],"number":[41,115],"of":[42,116,180,212],"other":[43],"countries,":[44],"there":[45],"currently":[47,160,206],"such":[49],"online":[50],"database":[51,74,165,189,219],"Africa.":[54,167,227],"DESCRIPTION:":[55],"The":[56,188],"current":[57],"presents":[59],"African":[62,182],"natural":[63,80,222],"compound":[64,76,123],"database,":[65,98],"named":[66],"SANCDB.":[67],"This":[68],"curated":[71,218],"fully-referenced":[73],"information":[77,135],"for":[78,108,175,184,215],"600":[79],"extracted":[82],"directly":[83],"journal":[85],"articles,":[86],"book":[87],"chapters":[88],"theses.":[90],"There":[91],"web":[94],"interface":[95],"which":[99,133],"simple":[101],"easy":[103],"use,":[105],"while":[106],"allowing":[107,145],"be":[111],"searched":[112],"by":[113,192,199],"different":[117],"criteria.":[118],"Being":[119],"fully":[120],"referenced,":[121],"each":[122],"page":[124],"contains":[125],"links":[126],"original":[129],"referenced":[130],"work":[131],"was":[136],"obtained.":[137],"Further,":[138],"website":[140],"provides":[141],"submission":[143,194],"pipeline,":[144],"researchers":[146],"deposit":[148],"their":[151],"own":[152],"into":[154],"database.":[156],"CONCLUSIONS:":[157],"SANCDB":[158,208,228],"only":[162],"web-based":[163],"It":[168],"aims":[169],"provide":[171],"useful":[173],"resource":[174],"silico":[178],"screening":[179],"NPs":[183],"purposes.":[187],"supported":[191],"pipeline":[195],"allow":[197],"growth":[198],"entries":[200],"researchers.":[202],"As":[203],"such,":[204],"we":[205],"present":[207],"starting":[210],"point":[211],"platform":[214],"community-driven,":[217],"further":[221],"freely":[230],"available":[231],"at":[232],"https://sancdb.rubi.ru.ac.za/.":[233]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":13},{"year":2024,"cited_by_count":14},{"year":2023,"cited_by_count":17},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":19},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":19},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
