{"id":"https://openalex.org/W2144637535","doi":"https://doi.org/10.1186/s13321-015-0065-7","title":"SpeckTackle: JavaScript charts for spectroscopy","display_name":"SpeckTackle: JavaScript charts for spectroscopy","publication_year":2015,"publication_date":"2015-05-08","ids":{"openalex":"https://openalex.org/W2144637535","doi":"https://doi.org/10.1186/s13321-015-0065-7","mag":"2144637535","pmid":"https://pubmed.ncbi.nlm.nih.gov/25984241"},"language":"en","primary_location":{"id":"doi:10.1186/s13321-015-0065-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-015-0065-7","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13321-015-0065-7.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1186/s13321-015-0065-7.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087750652","display_name":"Stephan Beisken","orcid":"https://orcid.org/0000-0002-2412-4118"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Stephan Beisken","raw_affiliation_strings":["European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD, UK;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD, UK;","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036680074","display_name":"Pablo Conesa","orcid":"https://orcid.org/0000-0003-0575-7718"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Pablo Conesa","raw_affiliation_strings":["European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, UK","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014348944","display_name":"Kenneth Haug","orcid":"https://orcid.org/0000-0003-3168-4145"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Kenneth Haug","raw_affiliation_strings":["European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, UK","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043186761","display_name":"Reza M. Salek","orcid":"https://orcid.org/0000-0001-8604-1732"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Reza M Salek","raw_affiliation_strings":["European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, UK","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040194803","display_name":"Christoph Steinbeck","orcid":"https://orcid.org/0000-0001-6966-0814"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Christoph Steinbeck","raw_affiliation_strings":["European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, CB10 1SD UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, UK","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5087750652"],"corresponding_institution_ids":["https://openalex.org/I1303153112"],"apc_list":{"value":2190,"currency":"USD","value_usd":2190},"apc_paid":{"value":2190,"currency":"USD","value_usd":2190},"fwci":2.1531,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.88914707,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"7","issue":"1","first_page":"17","last_page":"17"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11324","display_name":"Spectroscopy Techniques in Biomedical and Chemical Research","score":0.14390000700950623,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11324","display_name":"Spectroscopy Techniques in Biomedical and Chemical Research","score":0.14390000700950623,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.05460000038146973,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.051500000059604645,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/javascript","display_name":"JavaScript","score":0.8132113218307495},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7465455532073975},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6849256753921509},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.6340435743331909},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.6100084185600281},{"id":"https://openalex.org/keywords/chart","display_name":"Chart","score":0.563589334487915},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4752621054649353},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4637724757194519},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3748219907283783},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.32503414154052734},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.15279385447502136},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1038389503955841}],"concepts":[{"id":"https://openalex.org/C544833334","wikidata":"https://www.wikidata.org/wiki/Q2005","display_name":"JavaScript","level":2,"score":0.8132113218307495},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7465455532073975},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6849256753921509},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.6340435743331909},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.6100084185600281},{"id":"https://openalex.org/C190812933","wikidata":"https://www.wikidata.org/wiki/Q28923","display_name":"Chart","level":2,"score":0.563589334487915},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4752621054649353},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4637724757194519},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3748219907283783},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.32503414154052734},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.15279385447502136},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1038389503955841},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/s13321-015-0065-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-015-0065-7","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13321-015-0065-7.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:25984241","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25984241","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4432097","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4432097","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Cheminform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13321-015-0065-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13321-015-0065-7","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13321-015-0065-7.pdf","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production","score":0.4099999964237213}],"awards":[{"id":"https://openalex.org/G3068184929","display_name":null,"funder_award_id":"BB/L024152/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G360051300","display_name":null,"funder_award_id":"BB/L018721/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4339790565","display_name":null,"funder_award_id":"BB/I000933/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4875816404","display_name":"MetaboLights: Creating the missing Metabolomics community resource","funder_award_id":"BB/I000933/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4891599713","display_name":"A comprehensive online spectra analysis and visualisation tool for the OMICS sciences","funder_award_id":"BB/L018721/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G8422100602","display_name":"Metabo","funder_award_id":"BB/L024152/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2144637535.pdf","grobid_xml":"https://content.openalex.org/works/W2144637535.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W1680142897","https://openalex.org/W1966981724","https://openalex.org/W2028240481","https://openalex.org/W2059327215","https://openalex.org/W2063028213","https://openalex.org/W2084375915","https://openalex.org/W2096769282","https://openalex.org/W2103773262","https://openalex.org/W2120869341","https://openalex.org/W2135415614","https://openalex.org/W2141666186"],"related_works":["https://openalex.org/W2795601048","https://openalex.org/W2403324299","https://openalex.org/W2621177934","https://openalex.org/W4286287737","https://openalex.org/W1844100222","https://openalex.org/W3009852816","https://openalex.org/W2513223212","https://openalex.org/W2169602156","https://openalex.org/W42576273","https://openalex.org/W4366451129"],"abstract_inverted_index":{"BACKGROUND:":[0],"Spectra":[1],"visualisation":[2,31,94],"from":[3],"methods":[4],"such":[5],"as":[6,81],"mass":[7],"spectroscopy,":[8],"infrared":[9],"spectroscopy":[10,66],"or":[11],"nuclear":[12],"magnetic":[13],"resonance":[14],"is":[15,33,71,109,144],"an":[16,27],"essential":[17],"part":[18],"of":[19,26,125],"every":[20],"web-facing":[21],"spectral":[22],"resource.":[23],"The":[24,122],"development":[25],"intuitive":[28],"and":[29,36,47,74,101,117,130,136],"versatile":[30],"tool":[32],"a":[34,60],"time-":[35],"resource-intensive":[37],"task,":[38],"however,":[39],"most":[40],"databases":[41,49],"use":[42,135],"their":[43,53],"own":[44,54],"embedded":[45],"viewers":[46],"new":[48],"continue":[50],"to":[51,76,114,134],"develop":[52],"viewers.":[55],"RESULTS:":[56],"We":[57],"present":[58],"SpeckTackle,":[59],"custom-tailored":[61],"JavaScript":[62],"charting":[63],"library":[64,127,139],"for":[65,84,104],"in":[67,147],"life":[68],"sciences.":[69],"SpeckTackle":[70,108],"cross-browser":[72],"compatible":[73],"easy":[75],"integrate":[77],"into":[78],"existing":[79],"resources,":[80],"we":[82],"demonstrate":[83],"the":[85,97,120,126,138],"MetaboLights":[86],"database.":[87],"Its":[88],"default":[89],"chart":[90,142],"types":[91,143],"cover":[92],"common":[93],"tasks":[95],"following":[96],"de":[98],"facto":[99],"'look":[100],"feel'":[102],"standards":[103],"spectra":[105],"visualisation.":[106],"CONCLUSIONS:":[107],"released":[110],"under":[111],"GNU":[112],"LGPL":[113],"encourage":[115],"uptake":[116],"reuse":[118],"within":[119],"community.":[121],"latest":[123],"version":[124],"including":[128],"examples":[129],"documentation":[131],"on":[132],"how":[133],"extend":[137],"with":[140],"additional":[141],"available":[145],"online":[146],"its":[148],"public":[149],"repository.":[150]},"counts_by_year":[{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
